Carsten Kirkeby

Carsten Kirkeby

Senior Researcher

ORCID: 0000-0001-9292-5526

Publication year:
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  1. 2024
  2. Published

    A simulation model for highly pathogenic avian influenza spread in Danish wild birds

    Liu, Yangfan, Kjær, Lene Jung, Boklund, Anette, Clausen, P., Nygaard, T., Ward, M., Laffan, S. & Kirkeby, Carsten, 19 Mar 2024.

    Research output: Contribution to conference › Poster › Research

  3. Published

    The PAIR Project Charting Epidemic Frontiers with One Health Precision

    Kirkeby, Carsten, Bjerrum, A., Madsen, M. & Boklund, Anette, 18 Mar 2024.

    Research output: Contribution to conference › Poster › Research

  4. Published

    Kan man forudsige fugleinfluenza i Danmark? Kan man forudsige fugleinfluenza i Danmark?

    Kjær, Lene Jung, Boklund, Anette, Hjulsager, C. K., Larsen, Lars & Kirkeby, Carsten, 22 Feb 2024, In: videnskab.dk.

    Research output: Contribution to journal › Journal article › Communication

  5. Published

    Using registry data to identify individual dairy cows with abnormal patterns in routinely recorded somatic cell counts

    Henningsen, Maj Beldring, Reimert, Mossa Merhi, Denwood, Matt, Gussmann, Maya Katrin, Kirkeby, Carsten & Nielsen, Søren Saxmose, 21 Feb 2024, In: Journal of Theoretical Biology. 579, p. 1-7 7 p., 111718.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Are all avian influenza outbreaks in poultry the same? The predicted impact of poultry species and virus subtype

    Kirkeby, Carsten, Boklund, Anette, Larsen, Lars & Ward, M. P., 16 Feb 2024, In: Zoonoses and Public Health.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Ny forskning viser mulighed for langt mindre antibiotika til malkekøer: Ved at ændre medicineringen af køer, der lider af yverbetændelse, kan det samlede antibiotikaforbrug skæres ned til det halve.

    Svennesen, Line & Kirkeby, Carsten, 8 Feb 2024

    Research output: Other contribution › Net publication - Internet publication › Communication

  8. Published

    Risk factors for avian influenza in Danish poultry and wild birds during the epidemic from June 2020 to May 2021

    Liu, Yangfan, Kjær, Lene Jung, Boklund, Anette, Hjulsager, C. K., Larsen, Lars & Kirkeby, Carsten, Feb 2024, In: Frontiers in Veterinary Science. 11

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Accepted/In press

    Are all avian influenza outbreaks in poultry the same? The predicted impact of poultry species and virus subtype

    Kirkeby, Carsten, Boklund, Anette, Larsen, Lars & Ward, M. P., 2024, (Accepted/In press) In: Zoonoses and Public Health.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Photonic sensors reflect variation in insect abundance and diversity across habitats

    Rydhmer, Klas Karl Gustav, Jansson, S., Still, L., Beck, B. D., Chatzaki, V., Olsen, K., Van Hoff, B., Grønne, C., Meier, Jakob Klinge, Montoro, M., Schmidt, Inger Kappel, Kirkeby, Carsten, Smith, H. G. & Brydegaard, M., 2024, In: Ecological Indicators. 158, 12 p., 111483.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Treatment of clinically severe bovine mastitis – a scoping review

    Wilm, Jensine, Svennesen, Line, Kirkeby, Carsten & Krömker, Volker, 2024, In: Frontiers in Veterinary Science. 11, 1286461.

    Research output: Contribution to journal › Review › Research › peer-review

  12. 2023
  13. Published

    Fugleinfluenza – kommet for at blive? Udbrud af fugleinfluenza koster samfundet mange penge hvert år, når tusindvis af fjerkræ bliver aflivet. DK-VET har flere værktøjer i støbeskeen, så myndighederne kan bekæmpe spredning af fugleinfluenza optimalt.

    Kirkeby, Carsten, Kjær, Lene Jung & Boklund, Anette, 2023, In: Dansk Veterinaertidsskrift. 106, 1, p. 43

    Research output: Contribution to journal › Journal article › Communication

  14. Published

    Lactational treatment of bovine mastitis: Development over time and factors influencing cytological cure

    Wilm, Jensine, Krömker, Volker, Kirkeby, Carsten & Gussmann, Maya Katrin, 2023, In: Journal of Dairy Science. 106, 8, p. 5740-5752

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Modelling transmission of Avian Influenza in wild birds using a spatiotemporal cellular automata model

    Liu, Yangfan, Kjær, Lene Jung, Boklund, Anette, Clausen, P., Nyegaard, T., Ward, M. P., Laffan, S. & Kirkeby, Carsten, 2023, Abstract book of the GeoVet 2023 International Conference: Expanding boundaries: Interdisciplinary geospatial research for the One Health Era. Conte, A., Ippoliti, C. & Savini, L. (eds.). Edizioni IZSTe-press, p. 97-98

    Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research

  16. Published

    Remote Nanoscopy with Infrared Elastic Hyperspectral Lidar

    Müller, L., Li, M., Månefjord, H., Salvador, J., Reistad, N., Hernandez, J., Kirkeby, Carsten, Runemark, A. & Brydegaard, M., 2023, In: Advanced Science. 10, 15, 2207110.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Reservoirs of Staphylococcus spp. and Streptococcus spp. Associated with Intramammary Infections of Dairy Cows

    Woudstra, Svenja, Wente, N., Zhang, Y., Leimbach, S., Kirkeby, Carsten, Gussmann, Maya Katrin & Krömker, Volker, 2023, In: Pathogens. 12, 5, 699.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Reservoirs of Corynebacterium spp. in the Environment of Dairy Cows

    Woudstra, Svenja, Lücken, A., Wente, N., Zhang, Y., Leimbach, S., Gussmann, Maya Katrin, Kirkeby, Carsten & Krömker, Volker, 2023, In: Pathogens. 12, 1, 9 p., 139.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Strain diversity and infection durations of Staphylococcus spp. and Streptococcus spp. causing intramammary infections in dairy cows

    Woudstra, Svenja, Wente, N., Zhang, Y., Leimbach, S., Gussmann, Maya Katrin, Kirkeby, Carsten & Krömker, Volker, 2023, In: Journal of Dairy Science. 106, 6, p. 4214-4231

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Surveillance data and early warning models of highly pathogenic avian influenza in East Asia, 2020-2022

    Kjær, Lene Jung, Kirkeby, Carsten, Boklund, Anette & Ward, M. P., 2023, Abstract book of the GeoVet 2023 International Conference: Expanding boundaries: Interdisciplinary geospatial research for the One Health Era. Conte, A., Ippoliti, C. & Savini, L. (eds.). Edizioni IZSTe-press, p. 102-103

    Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research

  21. Published

    Transmission Pathways and Infection Dynamics of selected Staphylococcus and Streptococcus spp: Implications for the Prevention and Control of Intramammary Infections

    Woudstra, Svenja, Wente, N., Zhang, Y., Leimbach, S., Ren, K., Gussmann, Maya Katrin, Kirkeby, Carsten & Krömker, Volker, 2023, EUROPEAN BUIATRICS CONGRESS AND ECBHM JUBILEE SYMPOSIUM: ABSTRACT-BOOK. Verlag der DVG Service, p. 247-249

    Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research › peer-review

  22. Published

    Treatment of mild to moderate clinical bovine mastitis caused by gram-positive bacteria: A noninferiority randomized trial of local penicillin treatment alone or combined with systemic treatment

    Svennesen, Line, Skarbye, Alice Puk, Farre, M., Astrup, L. B., Halasa, T., Krömker, Volker, Denwood, Matt & Kirkeby, Carsten, 2023, In: Journal of Dairy Science. 106, 8, p. 5696-5714

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Use of Danish national somatic cell count data to assess the need for dry-off treatment in Holstein dairy cattle

    Henningsen, Maj Beldring, Denwood, Matt, Kirkeby, Carsten & Nielsen, Søren Saxmose, 2023, In: Animals. 13, 15, 13 p., 2523.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Using surveillance data for early warning modelling of highly pathogenic avian influenza in Europe reveals a seasonal shift in transmission, 2016-2022: [Inkl. correction]

    Kjær, Lene Jung, Ward, M. P., Boklund, Anette, Larsen, Lars, Hjulsager, C. K. & Kirkeby, Carsten, 2023, In: Scientific Reports. 13, 16 p., 15396.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. 2022
  26. Published

    Scheimpflug lidar range profiling of bee activity patterns and spatial distributions

    Rydhmer, Klas Karl Gustav, Prangsma, J., Brydegaard, M., Smith, H. G., Kirkeby, Carsten, Schmidt, Inger Kappel & Boelt, B., Dec 2022, In: Animal Biotelemetry. 10, 1, 13 p., 14.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Treatment of clinical mastitis: intramammary or in comination with parenteral administration of penicillin?

    Svennesen, Line, Skarbye, Alice Puk, Farre, Anders Michael & Kirkeby, Carsten, Sep 2022, p. 426-427. 2 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  28. Published

    Risk factors of avian influenza in Danish poultry and wild birds during the epidemic waves from June 2020 to May 2021

    Liu, Yangfan, Kjær, Lene Jung, Boklund, Anette, Hjulsager, C. K., Larsen, Lars & Kirkeby, Carsten, 8 Aug 2022.

    Research output: Contribution to conference › Poster › Research

  29. Published

    The impact of on-farm biosecurity for BVDV in Australian beef production

    Fountain, J., Brookes, V. J., Kirkeby, Carsten, Manyweathers, J., Maru, Y. & Hernandez-Jover, M., 8 Aug 2022.

    Research output: Contribution to conference › Poster › Research

  30. Published

    Forecasting outbreaks of high pathogenic avian influenza in Europe

    Kjær, Lene Jung, Boklund, Anette, Larsen, Lars, Hjulsager, C. K., Ward, M. P. & Kirkeby, Carsten, 23 Mar 2022.

    Research output: Contribution to conference › Conference abstract for conference › Research

  31. Published

    Transmission of SARS-CoV-2 Omicron VOC subvariants BA.1 and BA.2: Evidence from Danish Households

    Lyngse, Frederik Plesner, Kirkeby, Carsten, Denwood, Matt, Christiansen, L. E., Mølbak, Kåre, Møller, C. H., Skov, R. L., Krause, Tyra Grove, Rasmussen, M., Sieber, R. N., Johannesen, T. B., Lillebaek, Troels, Fonager, J., Fomsgaard, A., Møller, F. T., Stegger, M., Overvad, M., Spiess, K. & Mortensen, Laust Hvas, 30 Jan 2022, 2 p.

    Research output: Other contribution › Research

  32. Published

    3D-Printed Fluorescence Hyperspectral Lidar for Monitoring Tagged Insects

    Manefjord, H., Muller, L., Li, M., Salvador, J., Blomqvist, S., Runemark, A., Kirkeby, Carsten, Ignell, R., Bood, J. & Brydegaard, M., 2022, In: IEEE Journal of Selected Topics in Quantum Electronics. 28, 5, 7100109.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    A review of estimated transmission parameters for the spread of avian influenza viruses

    Kirkeby, Carsten & Ward, M. P., 2022, In: Transboundary and Emerging Diseases. 69, 6, p. 3238-3246

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Effect of vaccination on household transmission of SARS-CoV-2 Delta variant of concern

    Lyngse, Frederik Plesner, Mølbak, Kåre, Denwood, Matt, Christiansen, L. E., Møller, C. H., Rasmussen, M., Cohen, A. S., Stegger, M., Fonager, J., Sieber, R. N., Ellegaard, K. M., Nielsen, C. & Kirkeby, Carsten, 2022, In: Nature Communications. 13, 1, 3764.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Evaluation of diagnostic test procedures for SARS-CoV-2 using latent class models

    Stærk-Østergaard, J., Kirkeby, Carsten, Christiansen, L. E., Andersen, M. A., Møller, C. H., Voldstedlund, M. & Denwood, Matt, 2022, In: Journal of Medical Virology. 94, 10, p. 4754-4761

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Household transmission of SARS-CoV-2 Omicron variant of concern subvariants BA.1 and BA.2 in Denmark

    Lyngse, Frederik Plesner, Kirkeby, Carsten, Denwood, Matt, Christiansen, L. E., Mølbak, Kåre, Holten Møller, C., Skov, R. L., Krause, Tyra Grove, Rasmussen, M., Sieber, R., Johannesen, T. B., Lillebaek, Troels, Fonager, J., Fomsgaard, A., Møller, F. T., Stegger, M., Overvad, M., Spiess, K. & Mortensen, Laust Hvas, 2022, In: Nature Communications. 13, 7 p., 5760 .

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Household transmission of the SARS-CoV-2 Omicron variant in Denmark

    Lyngse, Frederik Plesner, Mortensen, Laust Hvas, Denwood, Matt, Christiansen, L. E., Møller, C. H., Skov, R. L., Spiess, K., Fomsgaard, A., Lassaunière, R., Rasmussen, M., Stegger, M., Nielsen, C., Sieber, R. N., Cohen, A. S., Møller, F. T., Overvad, M., Mølbak, Kåre, Krause, Tyra Grove & Kirkeby, Carsten, 2022, In: Nature Communications. 13, 5573.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Landscape effects and spatial patterns of avian influenza virus in Danish wild birds, 2006-2020

    Kjær, Lene Jung, Hjulsager, C. K., Larsen, Lars, Boklund, Anette, Halasa, T., Ward, M. P. & Kirkeby, Carsten, 2022, In: Transboundary and Emerging Diseases. 69, 2, p. 706-719

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Nationwide study on SARS-CoV-2 transmission within households from lockdown to reopening, Denmark, 27 February 2020 to 1 August 2020

    Lyngse, Frederik Plesner, Kirkeby, Carsten, Halasa, T., Andreasen, V., Skov, R. L., Møller, F. T., Krause, Tyra Grove & Mølbak, Kåre, 2022, In: Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin. 27, 6, p. 1-12

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    One size does not fit all: Exploring the economic and non-economic outcomes of on-farm biosecurity for bovine viral diarrhoea virus in Australian beef production

    Fountain, J., Brookes, V., Kirkeby, Carsten, Manyweathers, J., Maru, Y. & Hernandez-Jover, M., 2022, In: Preventive Veterinary Medicine. 208, 105758.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Vurdering af, om afbrydelse af mastitisbehandling øger risikoen for udvikling af antibiotikaresistens

    Krömker, Volker, Damborg, Peter Panduro & Kirkeby, Carsten, 2022, 10 p.

    Research output: Book/Report › Report › Commissioned

  42. Published

    Weak population genetic structure in Eurasian spruce bark beetle over large regional scales in Sweden

    Ellerstrand, S. J., Choudhury, S., Svensson, K., Andersson, M. N., Kirkeby, Carsten, Powell, D., Schlyter, F., Jönsson, A. M., Brydegaard, M., Hansson, B. & Runemark, A., 2022, In: Ecology and Evolution. 12, 7, e9078.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. 2021
  44. Published

    Omikron: Rejserestriktioner kan bremse spredning – men ikke stoppe den

    Kirkeby, Carsten, 8 Dec 2021, Videnskab.dk.

    Research output: Other contribution › Net publication - Internet publication › Communication

  45. Published

    Notat om effekten af nedlukning frem til jul, den 6. december 2020

    Kirkeby, Carsten & Denwood, Matt, 6 Dec 2021

    Research output: Book/Report › Report › Commissioned

  46. Published

    Ekspertrapport af den 23. oktober 2020. Incidens og fremskrivning af COVID-19 tilfælde

    Kirkeby, Carsten & Denwood, Matt, 23 Oct 2021

    Research output: Book/Report › Report › Commissioned

  47. Published

    Spatial patterns of avian influenza in wild birds from Denmark, 2006-2020

    Kjær, Lene Jung, Boklund, Anette, Kirkeby, Carsten, Hjulsager, C. K., Larsen, Lars, Halasa, T. & Ward, M. P., 25 Mar 2021.

    Research output: Contribution to conference › Conference abstract for conference › Research

  48. Published

    Spatial patterns of avian influenza in wild birds from Denmark, 2006-2020

    Kjær, Lene Jung, Hjulsager, C., Larsen, Lars, Boklund, Anette, Halasa, T., Ward, M. P. & Kirkeby, Carsten, 11 Mar 2021, Society for Veterinary Epidemiology and Preventive Medicine: Proceedings: Online, 24-26 March 2021. Society for Veterinary Epidemiology and Preventive Medicine

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research

  49. Published

    Association between SARS-CoV-2 Transmissibility, Viral Load, and Age in Households

    Lyngse, Frederik Plesner, Mølbak, Kåre, Franck, K. T., Nielsen, C., Skov, R. L., Voldstedlund, M., Cohen, A. S. & Kirkeby, Carsten, 5 Mar 2021.

    Research output: Working paper › Preprint › Research

  50. Published

    Særskilt bilag af d. 3. februar til ”Notat om prognoser for smittetal og indlæggelser ved scenarier for genåbning af 0.-4. klasse i grundskolen”

    Kirkeby, Carsten, Denwood, Matt & Lyngse, Frederik Plesner, 3 Feb 2021

    Research output: Book/Report › Report › Commissioned

  51. Published

    Tillægsnotat af d. 3. februar til notat af d. 31. januar 2021 om prognoser for smittetal og indlæggelser ved yderligere genåbningsscenarie

    Kirkeby, Carsten, Denwood, Matt & Lyngse, Frederik Plesner, 3 Feb 2021

    Research output: Book/Report › Report › Commissioned

  52. Published

    Notat om prognoser for smittetal og indlæggelser ved scenarier for genåbning af 0.-4. klasse i grundskolen

    Kirkeby, Carsten, Denwood, Matt & Lyngse, Frederik Plesner, 1 Feb 2021

    Research output: Book/Report › Report › Commissioned

  53. Published

    Scenarier for udviklingen i den engelske virusvariant af SARS-COV-2 (cluster B.1.1.7)

    Kirkeby, Carsten & Denwood, Matt, 2 Jan 2021, 3 p.

    Research output: Book/Report › Report › Commissioned

  54. Published

    A Practical Introduction to Mechanistic Modeling of Disease Transmission in Veterinary Science

    Kirkeby, Carsten, Brookes, V. J., Ward, M. P., Dürr, S. & Halasa, T., 2021, In: Frontiers in Veterinary Science. 7, 546651.

    Research output: Contribution to journal › Journal article › Research › peer-review

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ID: 200170995