Carsten Kirkeby

Carsten Kirkeby

Senior Researcher

ORCID: 0000-0001-9292-5526

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  1. Published

    3D-Printed Fluorescence Hyperspectral Lidar for Monitoring Tagged Insects

    Manefjord, H., Muller, L., Li, M., Salvador, J., Blomqvist, S., Runemark, A., Kirkeby, Carsten, Ignell, R., Bood, J. & Brydegaard, M., 2022, In: IEEE Journal of Selected Topics in Quantum Electronics. 28, 5, 7100109.

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Published

    Contracaecum osculatum (sensu lato) infection of Gadus morhua in the Baltic Sea: inter- and intraspecific interactions

    Mohamed, A., Zuo, S., Karami, Asma Mohammad, Marnis, H., Setyawan, A., Mehrdana, Foojan, Kirkeby, Carsten, Kania, Per & Buchmann, Kurt, 2020, In: International Journal for Parasitology. 50, 10-11, p. 891-898

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    A Cow- and Herd-specific Bio-Economic Model of Intramammary Infections in Dairy Cows

    Kirkeby, Carsten, Gussmann, Maya Katrin, Græsbøll, K., Nielsen, Søren Saxmose, Toft, N. & Hisham Beshara Halasa, T., 2017.

    Research output: Contribution to conference › Conference abstract for conference › Research

  4. Published

    A Practical Introduction to Mechanistic Modeling of Disease Transmission in Veterinary Science

    Kirkeby, Carsten, Brookes, V. J., Ward, M. P., Dürr, S. & Halasa, T., 2021, In: Frontiers in Veterinary Science. 7, 546651.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    A cohort study of the effect of Streptococcus agalactiae on milk yield and somatic cell count in Norwegian dairy cows

    Holmøy, I. H., Toftaker, I., Kirkeby, Carsten, Østerås, O., Jørgensen, H. J. & Nødtvedt, A., 2019, In: Journal of Dairy Science. 102, 9, p. 8385-8399

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. A new method for estimating transmission rates of mastitis-causing pathogens

    Kirkeby, Carsten, Halasa, T., Gussmann, Maya Katrin & Græsbøll, K., 2018.

    Research output: Contribution to conference › Poster › Research › peer-review

  7. Published

    A review of estimated transmission parameters for the spread of avian influenza viruses

    Kirkeby, Carsten & Ward, M. P., 2022, In: Transboundary and Emerging Diseases. 69, 6, p. 3238-3246

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    A simulation model for highly pathogenic avian influenza spread in Danish wild birds

    Liu, Yangfan, Kjær, Lene Jung, Boklund, Anette, Clausen, P., Nygaard, T., Ward, M., Laffan, S. & Kirkeby, Carsten, 19 Mar 2024.

    Research output: Contribution to conference › Poster › Research

  9. Published

    A simulation study to investigate the added value in using differential somatic cell count as an additional indicator for udder health management in dairy herds

    Gussmann, Maya Katrin, Kirkeby, Carsten, Schwarz, D., Farre, Anders Michael & Halasa, T., 2020, In: Preventive Veterinary Medicine. 182, 105090.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. A strain-, cow-, and herd-specific bio-economic simulation model of intramammary infections in dairy cattle herds

    Gussmann, Maya Katrin, Kirkeby, Carsten, Græsbøll, K., Farre, M. & Hisham Beshara Halasa, T., 2018, In: Journal of Theoretical Biology. 449, p. 83-93 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Adaptive test schemes for control of paratuberculosis in dairy cows

    Kirkeby, Carsten, Græsbøll, K., Nielsen, Søren Saxmose, Christiansen, L. E., Toft, N. & Halasa, T., 1 Dec 2016, In: P L o S One. 11, 12, 13 p., e0167219.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Advances in automatic identification of flying insects using optical sensors and machine learning

    Kirkeby, Carsten, Rydhmer, Klas Karl Gustav, Cook, S. M., Strand, A., Torrance, M. T., Swain, J. L., Prangsma, J., Johnen, A., Jensen, M., Brydegaard, M. & Græsbøll, K., 2021, In: Scientific Reports. 11, 1, 1555.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    An atlas of climatic and environmental determinants of present and future veterinary and zoonotic diseases in the Nordic area

    Bødker, René & Kirkeby, Carsten, 2010.

    Research output: Contribution to conference › Paper › Communication

  14. Analysis of the dynamics of Staphylococcus aureus in two Danish dairy cattle herds

    Kirkeby, Carsten, Zervens, L. M., Toft, N., Farre, M. & Hisham Beshara Halasa, T., 2018.

    Research output: Contribution to conference › Paper › Research › peer-review

  15. Accepted/In press

    Are all avian influenza outbreaks in poultry the same? The predicted impact of poultry species and virus subtype

    Kirkeby, Carsten, Boklund, Anette, Larsen, Lars & Ward, M. P., 2024, (Accepted/In press) In: Zoonoses and Public Health.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Are all avian influenza outbreaks in poultry the same? The predicted impact of poultry species and virus subtype

    Kirkeby, Carsten, Boklund, Anette, Larsen, Lars & Ward, M. P., 16 Feb 2024, In: Zoonoses and Public Health.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Association between SARS-CoV-2 Transmissibility, Viral Load, and Age in Households

    Lyngse, Frederik Plesner, Mølbak, Kåre, Franck, K. T., Nielsen, C., Skov, R. L., Voldstedlund, M., Cohen, A. S. & Kirkeby, Carsten, 5 Mar 2021.

    Research output: Working paper › Preprint › Research

  18. Published

    Association between SARS-CoV-2 Transmission Risk, 2 Viral Load, and Age: A Nationwide Study in Danish Households

    Lyngse, Frederik Plesner, Mølbak, K., Franck, K. T., Nielsen, C., Skov, R. L. & Kirkeby, Carsten, 2021, 34 p.

    Research output: Working paper › Research

  19. Association between land cover and Culicoides (Diptera: Ceratopogonidae) breeding sites on four Danish cattle farms

    Kirkeby, Carsten, Bødker, René, Stockmarr, A. & Enøe, C., 2009, In: Entomologica Fennica. 20, 4, p. 228-232 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Association of MAP specific ELISA-responses and productive parameters in 314 Danish dairy farms

    Græsbøll, K., Nielsen, S. S., Hisham Beshara Halasa, T., Kirkeby, Carsten, Toft, N. & Christiansen, L. E., 2014.

    Research output: Contribution to conference › Paper › Research › peer-review

  21. Published

    Association of MAP specific ELISA-responses and productive parameters in 367 Danish dairy farms

    Græsbøll, K., Nielsen, Søren Saxmose, Halasa, T., Kirkeby, Carsten, Toft, N. & Christiansen, L. E., 2014. 3 p.

    Research output: Contribution to conference › Paper › Research

  22. Published

    Associations between udder health and culling in dairy cows

    Gussmann, Maya Katrin, Denwood, Matt, Kirkeby, Carsten, Farre, M. & Halasa, T., 2019, In: Preventive Veterinary Medicine. 171, 104751.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Bark beetles as lidar targets and prospects of photonic surveillance

    Li, M., Jansson, S., Runemark, A., Peterson, J., Kirkeby, Carsten, Jönsson, A. M. & Brydegaard, M., 2021, In: journal of biophotonics. 14, 4, e202000420.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Battling Bluetongue and Schmallenberg virus: Local scale behavior of transmitting vectors

    Stockmarr, A., Kirkeby, Carsten & Bødker, René, 2015

    Research output: Other contribution › Communication

  25. Published

    Blended learning for korte og specialiserede undervisningsforløb

    Kirkeby, Carsten & Hansen, C., 2018, In: Dansk Universitetspaedagogisk Tidsskrift. 13, 25, p. 107-119

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Brug beslutningstræet til at vælge den rigtige behandling af mastitis: Når der tages beslutninger om klinisk og subklinisk mastitis, er det væsentligt for behandlingens effekt, smittespredning og økonomi. Beslutningstræet viser, hvad simuleringsmodeller foreslår som det bedste.

    Gussmann, Maya Katrin, Halasa, T., Kirkeby, Carsten & Nielsen, Søren Saxmose, 8 Mar 2019, 2 p. Landbrug og fødevarer SEGES.

    Research output: Other contribution › Net publication - Internet publication › Communication

  27. Published

    COVID-19 Transmission Within Danish Households: A Nationwide Study from Lockdown to Reopening

    Lyngse, Frederik Plesner, Kirkeby, Carsten, Halasa, T., Andreasen, V., Skov, R. L., Møller, F. T., Krause, Tyra Grove & Mølbak, Kåre, 2021, 36 p. (Eurosurveillance).

    Research output: Working paper › Preprint › Research

  28. Communicating spatial risk of tick-borne infections - Creating a ScandTick Innovation website based on surveillance data

    Clausen, C. G., Schou, K. K., Kirkeby, Carsten & Bødker, René, 2016.

    Research output: Contribution to conference › Paper › Communication

  29. Published

    Comparison of the current abattoir surveillance system for detection of paratuberculosis in Australian sheep with quantitative PCR tissue strategies using simulation modelling

    Ly, A., Kirkeby, Carsten, Sergeant, E., Plain, K., Smith, M. & Dhand, N., 2021, In: Preventive Veterinary Medicine. 196, 105495.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    Composite or aseptic quarter milk samples: Sensitivity and specificity of PCR and bacterial culture of Staphylococcus aureus based on Bayesian latent class evaluation

    Toft, N., Halasa, T., Nielsen, Søren Saxmose, Hechinger, S., Zervens, L. M., Schwarz, D. & Kirkeby, Carsten, 2019, In: Preventive Veterinary Medicine. 171, 104689.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Culicoides (Avaritia) gornostaevae Mirzaeva, 1984 (Diptera: Ceratopogonidae) a possible vector species of the Obsoletus group new to the European fauna

    Kirkeby, Carsten & Dominiak, P., 2014, In: Parasites & Vectors. 7, 445

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Culicoids as Vectors of Schmallenberg Virus

    Rasmussen, L. D., Kristensen, B., Kirkeby, Carsten, Rasmussen, T. B., Belsham, G., Bødker, R. & Bøtner, A., 2012, In: Emerging Infectious Diseases (Online). 18, 7, p. 1204-1206 3 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Daily Evolution of the Insect Biomass Spectrum in an Agricultural Landscape Accessed with Lidar

    Brydegaard, M., Gebru, A., Kirkeby, Carsten, Åkesson, S. & Smith, H., 2016, In: E P J Web of Conferences. 119, 119.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Dairy farmers' compliance with culling recommendation in paratuberculosis programme

    Nielsen, Søren Saxmose & Kirkeby, Carsten, 2016.

    Research output: Contribution to conference › Paper › Communication

  35. Danske metoder kan hjælpe med at bremse alt fra ebola til fugleinfluenza

    Kirkeby, Carsten, 2017, In: videnskab.dk. oktober

    Research output: Contribution to journal › Journal article › Communication

  36. Published

    Danske præciseringer af internationale mastitisanbefalinger. De internationale mastitisanbefalinger består af 10 punkter, hvor nogle nu kan præciseres for danske forhold baseret på resultaterne fra STOPMAST projektet

    Nielsen, Søren Saxmose, Krogh, M. A., Kirkeby, Carsten, Østergaard, S. & Halasa, T., 14 Mar 2019, 3 p. www.landbrugsinfo.dk : Landbrug og fødevarer SEGES.

    Research output: Other contribution › Net publication - Internet publication › Communication

  37. Published

    Delaying the peak of the COVID-19 epidemic with travel restrictions

    Græsbøll, K., Christiansen, L. E., Thygesen, U. H. & Kirkeby, Carsten, 2021, In: Epidemiologic Methods. 10, s1, 4 p., 20200042.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Derfor kan eksperter i dyresygdomme forudsige, hvordan coronavirus spreder sig

    Kirkeby, Carsten, Denwood, Matt & Halasa, T., 5 Dec 2020, In: videnskab.dk.

    Research output: Contribution to journal › Journal article › Communication

  39. Published

    Determinants for Treatments in Relation to Udder Health in Danish Dairy Cattle Farms

    Gussmann, Maya Katrin, Græsbøll, K., Kirkeby, Carsten, Nielsen, Søren Saxmose, Toft, N., Farre, M. & Hisham Beshara Halasa, T., 2017.

    Research output: Contribution to conference › Paper › Research › peer-review

  40. Published

    Determinants of antimicrobial treatment for udder health in Danish dairy cattle herds

    Gussmann, Maya Katrin, Græsbøll, K., Toft, N., Nielsen, Søren Saxmose, Farre, M., Kirkeby, Carsten & Halasa, T., Jan 2018, In: Journal of Dairy Science. 101, 1, p. 505-517 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Differential Somatic Cell Count: Value for Udder Health Management

    Halasa, T. & Kirkeby, Carsten, 23 Dec 2020, In: Frontiers in Veterinary Science. 7, 609055.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Differential Somatic Cell Count (DSCC) for Detecting Intra-mammary Infections

    Kirkeby, Carsten, Zervens, L. M., Schwarz, D., Farre, Anders Michael, Toft, N., Nielsen, Søren Saxmose & Halasa, T., 15 May 2019.

    Research output: Contribution to conference › Poster › Communication

  43. Published

    Differential Somatic Cell Count (DSCC) for Detecting Intra-mammary Infections

    Kirkeby, Carsten, 29 Jan 2019.

    Research output: Contribution to conference › Poster › Research › peer-review

  44. Published

    Differential Somatic Cell Count (DSCC) for Detecting Intra-mammary Infections

    Kirkeby, Carsten, 27 Mar 2019.

    Research output: Contribution to conference › Poster › Research

  45. Published

    Differentialcelletal: En ny og lovende indikator for mastitis

    Kirkeby, Carsten, Farre, Anders Michael, Nielsen, Søren Saxmose & Halasa, T., 2020, In: Kvaeg. 2019, December, p. 32-33

    Research output: Contribution to journal › Journal article › Communication

  46. Published

    Dynamics of somatic cell count (SCC) and differential SCC during and following intramammary infections

    Kirkeby, Carsten, Schwarz, D., Denwood, Matt, Farre, M., Nielsen, Søren Saxmose, Gussmann, Maya Katrin, Toft, N. & Halasa, T., 2021, In: Journal of Dairy Science. 104, p. 3427-3438 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Economic and epidemiological impact of different intervention strategies for clinical contagious mastitis

    Gussmann, Maya Katrin, Steeneveld, W., Kirkeby, Carsten, Hogeveen, H., Nielen, M., Farre, M. & Halasa, T., 2019, In: Journal of Dairy Science. 102, 2, p. 1483-1493

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Economic and epidemiological impact of different intervention strategies for subclinical and clinical mastitis

    Gussmann, Maya Katrin, Steeneveld, W., Kirkeby, Carsten, Hogeveen, H., Farre, M. & Halasa, T., 1 May 2019, In: Preventive Veterinary Medicine. 166, p. 78-85 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Effect of vaccination on household transmission of SARS-CoV-2 Delta variant of concern

    Lyngse, Frederik Plesner, Mølbak, Kåre, Denwood, Matt, Christiansen, L. E., Møller, C. H., Rasmussen, M., Cohen, A. S., Stegger, M., Fonager, J., Sieber, R. N., Ellegaard, K. M., Nielsen, C. & Kirkeby, Carsten, 2022, In: Nature Communications. 13, 1, 3764.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Ekspertrapport af den 16. april 2020. Matematisk modellering af COVID-19 smittespredning og sygehusbelastning ved scenarier for yderligere initiativer i Fase 1 af genåbningen

    Kirkeby, Carsten, Halasa, T. & Denwood, Matt, 2020

    Research output: Other contribution › Commissioned

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ID: 200170995