Ernst Stefan Seemann
Associate Professor
- 2017
- Published
RNAscClust: Clustering RNA sequences using structure conservation and graph based motifs
Miladi, M., Junge, A., Costa, F., Seemann, Ernst Stefan, Havgaard, Jakob Hull, Gorodkin, Jan & Backofen, R., 2017, In: Bioinformatics. 33, 14, p. 2089-2096 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The identification and functional annotation of RNA structures conserved in vertebrates
Seemann, Ernst Stefan, Mirza, A. H., Hansen, C., Bang-Berthelsen, C. H., Garde, C., Christensen-Dalsgaard, M., Torarinsson, E., Yao, Z., Workman, C. T., Pociot, Flemming, Nielsen, Henrik, Tommerup, Niels, Ruzzo, W. L. & Gorodkin, Jan, 2017, In: Genome Research. 27, p. 1371-1383 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
DotAligner: Identification and clustering of RNA structure motifs
Smith, M. A., Seemann, Ernst Stefan, Quek, X. C. & Mattick, J. S., Dec 2017, In: Genome Biology. 18, 1, 12 p., 244.Research output: Contribution to journal › Journal article › Research › peer-review
- 2018
- Published
Identification and characterization of novel conserved RNA structures in Drosophila
Kirsch, Rebecca, Seemann, Ernst Stefan, Ruzzo, W. L., Cohen, S. M., Stadler, P. F. & Gorodkin, Jan, 2018, In: BMC Genomics. 19, 20 p., 899.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The developmental neurogenic niche of the Entorhinal cortex revealed by single-cell transcriptomics.
Bergmann, T. B., Liu, Y., Lee, J., Peralvo Vidal, Juan Miguel, Mori, Yuki, Seemann, Ernst Stefan, Pihl, M., Thomsen, Preben Dybdahl, Hyttel, P., witter, M., Gorodkin, Jan, Hall, Vanessa Jane & Pers, Tune H, 2018.Research output: Contribution to conference › Conference abstract for conference › Research
- Published
Uncovering the anatomical and molecular landscape of the developing entorhinal cortex.
Liu, Y., Bergmann, T. B., Peralvo Vidal, Juan Miguel, Lee, J., Mori, Yuki, Seemann, Ernst Stefan, Pihl, M., Thomsen, Preben Dybdahl, Gorodkin, Jan, Hyttel, P., Pers, Tune H, witter, M. & Hall, Vanessa Jane, 2018.Research output: Contribution to conference › Conference abstract for conference › Research
- Published
Multiple Sequence Alignments Enhance Boundary Definition of RNA Structures
Sabarinathan, R., Anthon, Christian, Gorodkin, Jan & Seemann, Ernst Stefan, 4 Dec 2018, In: Genes. 9, 12, 17 p., 604.Research output: Contribution to journal › Journal article › Research › peer-review
- 2019
- Published
Production of stellate cells from induced pluripotent stem cells to study Alzheimer's disease pathology
Mogus, L., Bergmann, T. B., Liu, Y., Lee, J., Pfisterer, U. G., Handfield, L., Asenjo Martinez, A., Seemann, Ernst Stefan, Witter, M., Khodosevich, Konstantin, Gorodkin, Jan, Hemberg, M., Pers, Tune H & Hall, Vanessa Jane, 2019. 1 p.Research output: Contribution to conference › Conference abstract for conference › Communication
- Published
Proteomic profiling of the thrombin-activated canine platelet secretome (CAPS)
Cremer, Signe Emilie, Catalfamo, J. L., Goggs, R., Seemann, Ernst Stefan, Kristensen, Annemarie T. & Brooks, M. B., 2019, In: PLoS ONE. 14, 11, e0224891.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
RNAcentral: a hub of information for non-coding RNA sequences
The RNAcentral Constortium , T., Gorodkin, Jan & Seemann, Ernst Stefan, 2019, In: Nucleic Acids Research. 47, D1, p. D221–D229Research output: Contribution to journal › Journal article › Research › peer-review
ID: 4223622
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1290
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Detection of RNA structures in porcine EST data and related mammals
Research output: Contribution to journal › Journal article › Research › peer-review
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879
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Structured RNAs and synteny regions in the pig genome
Research output: Contribution to journal › Journal article › Research › peer-review
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668
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Unifying evolutionary and thermodynamic information for RNA folding of multiple alignments
Research output: Contribution to journal › Journal article › Research › peer-review
Published