Jan Gorodkin
Professor
- Published
EST analysis on pig mitochondria reveal novel expression differences between developmental and adult tissues
Scheibye-Alsing, K., Cirera, Susanna, Gilchrist, M. J., Fredholm, Merete & Gorodkin, Jan, 2007, In: BMC Genomics. 8, 367, 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Emerging applications of read profiles towards the functional annotation of the genome
Pundhir, Sachin, Poirazi, P. & Gorodkin, Jan, 19 May 2015, In: Frontiers in Genetics. 6, 11 p., 188.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Emerging tools for RNA structure analysis in polymorphic data
Radhakrishnan, S., Seemann, Ernst Stefan & Gorodkin, Jan, 2015, In: Biozoom. 2, p. 10-13 4 p.Research output: Contribution to journal › Journal article › Communication
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Enhancing CRISPR-Cas9 gRNA efficiency prediction by data integration and deep learning
Xiang, X., Corsi, G. I., Anthon, C., Qu, K., Pan, X., Liang, X., Han, P., Dong, Z., Liu, L., Zhong, J., Ma, T., Wang, J., Zhang, X., Jiang, H., Xu, F., Liu, X., Xu, X., Wang, J., Yang, H., Bolund, L. & 4 others, , 2021, In: Nature Communications. 12, 1, 9 p., 3238.Research output: Contribution to journal › Journal article › Research › peer-review
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Epigenetic and Transcriptomic Characterization of Pure Adipocyte Fractions From Obese Pigs Identifies Candidate Pathways Controlling Metabolism
Jacobsen, M. J., Havgaard, Jakob Hull, Anthon, Christian, Mentzel, Caroline M. Junker, Cirera, Susanna, Krogh, P. M., Pundhir, Sachin, Karlskov-Mortensen, Peter, Bruun, C. S., Lesnik, P., Guerin, M., Gorodkin, Jan, Jørgensen, Claus Bøttcher, Fredholm, Merete & Barrès, Romain, 2019, In: Frontiers in Genetics. 10, 13 p., 1268.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Evolutionary rate variation and RNA secondary structure prediction
Knudsen, B., Andersen, E. S., Damgaard, C., Kjems, J. & Gorodkin, Jan, 2004, In: Computational Biology and Chemistry. 28, 3, p. 219-226 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Fast local fragment chaining using sum-of-pair gap costs
Otto, C., Hoffmann, S., Gorodkin, Jan & Stadler, P. F., 2011, In: Algorithms for Molecular Biology. 6, 4Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Fast pairwise structural RNA alignments by pruning of the dynamical programming matrix
Havgaard, Jakob Hull, Torarinsson, E. & Gorodkin, Jan, 2007, In: PLoS Computational Biology. 3, 10, p. 1896-1908 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Flagella disruption in Bacillus subtilis increases amylase production yield
Fehler, A. O., Kallehauge, T. B., Geissler, Adrian Sven, González-Tortuero, E., Seemann, Ernst Stefan, Gorodkin, Jan & Vinther, Jeppe, 2022, In: Microbial Cell Factories. 21, 11 p., 131.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Foldalign 2.5: multithreaded implementation for pairwise structural RNA alignment
Sundfeld, D., Havgaard, Jakob Hull, de Melo, A. C. M. A. & Gorodkin, Jan, 2016, In: Bioinformatics. 32, 8, p. 1238-1240 3 p.Research output: Contribution to journal › Journal article › Research › peer-review
ID: 4356276
Most downloads
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2867
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Porcine transcriptome analysis based on 97 non-normalized cDNA libraries and assembly of 1,021,891 expressed sequence tags
Research output: Contribution to journal › Journal article › Research › peer-review
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1378
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454 pyrosequencing based transcriptome analysis of Zygaena filipendulae with focus on genes involved in biosynthesis of cyanogenic glucosides
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
1305
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Transcriptome-wide analysis of UTRs in non-small cell lung cancer reveals cancer-related genes with SNV-induced changes on RNA secondary structure and miRNA target sites
Research output: Contribution to journal › Journal article › Research › peer-review
Published