Susanna Cirera

Susanna Cirera

Associate Professor


  1. 1998
  2. Published

    Molecular diagnosis of lecithin: cholesterol acyltransferase deficiency in a presymptomatic proband

    Cirera, Susanna, Julve, J., Ferrer, I., Mainou, C., Bonet, R., Martín-Campos, J. M., Gonzáles-Sastre, F. & Blanco-Vaca, F., 1998, In: Clinical Chemistry and Laboratory Medicine. 36, 7, p. 443-448 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    Molecular evolution of a duplication: the sex-peptide(Acp70A) gene region of Drosophila subobscura and Drosophila madeirensis

    Cirera, Susanna & Aguadé, M., 1998, In: Molecular Biology and Evolution. 15, 8, p. 988-996 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. Published

    The ¤sex-peptide gene (Acp70A) is duplicated in Drosophila subobscura

    Cirera, Susanna & Aguadé, M., 1998, In: Gene. 210, p. 247-254 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. 2001
  6. Published

    Isolation and mapping of the pig homolog of the Wiskott-Aldrich Syndrome gene (WAS)

    Cirera, Susanna & Fredholm, Merete, 2001, In: Cytogenetic and Genome Research. 92, p. 349-350 2 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. Published

    Isolation and mapping the pig homologs survivin (BIRC5) and effector cell protease receptor 1 (EPR1) genes

    Cirera, Susanna & Fredholm, Merete, 2001, In: Cytogenetic and Genome Research. 92, p. 351-352 2 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. 2003
  9. Published

    Effects of a high-fat, low-fiber diet on gut growth, function and microbiology in aged sows

    Sangild, Per Torp, Nielsen, T. T., Cirera, Susanna, Fredholm, Merete, Canibe, N., Troelsen, J. & Olsen, J., 2003, Ikke angivet. R.O. Ball (ed.). 2 ed. University of Alberta Press, p. 81-83 3 p.

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearch

  10. Published

    The GENETPIG database: a tool for comparative mapping in pig (Sus scrofa)

    Karsenty, E., Barillot, E., Tosser-Klopp, G., Lahbib-Mansais, Y., Milan, D., Hatey, F., Cirera, Susanna, Sawera, M., Jørgensen, Claus Bøttcher, Chowdhary, B., Fredholm, F., Wimmers, K., Ponsuksili, S., Davoli, R., Fontanesi, L., Braglia, S., Zambonelli, P., Bigi, D., Neuenschwander, S. & Gellin, J., 2003, In: Nucleic Acids Research. 31, 1, p. 138-141 4 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. Published

    Linkage and comparative mapping of the locus controlling susceptibility towards E. coli F4ab/ac diarrhoea in pigs

    Jørgensen, Claus Bøttcher, Cirera, Susanna, Anderson, S. I., Archibald, A. L., Raudsepp, T., Chowdhary, B., Edfors-Lilja, I., Andersson, L. & Fredholm, Merete, 1 Dec 2003, In: Cytogenetic and Genome Research. 102, 1-4, p. 157-162 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. 2004
  13. Published

    FISH mapping and sequence analysis of 87 porcine BAC clones: short communication

    Anistoroaei, R. M., Cirera, Susanna, Jørgensen, Claus Bøttcher, Fredholm, Merete & Christensen, Knud Arnbjerg, 2004, In: Animal Genetics. 35, 1, p. 58-62 5 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. 2005
  15. Published

    A high-resolution comparative map between pig chromosome 17 and human chromosomes 4, 8, and 20: Identification of synteny breakpoints

    Lahbib-Mansais, Y., Karlskov-Mortensen, Peter, Mompart, F., Milan, D., Jørgensen, Claus Bøttcher, Cirera, Susanna, Gorodkin, Jan, Faraut, T., Yerle, M. & Fredholm, Merete, 2005, In: Genomics. 86, 4, p. 405-413 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Published

    Mapping and expression studies of the mir17-92 cluster on pig chromosome 11

    Sawera, M., Gorodkin, Jan, Cirera, Susanna & Fredholm, Merete, 2005, In: Mammalian Genome. 16, 8, p. 594-598 5 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  17. Published

    Marker-assisted selection on E. coli F4ab/ac resistance and the effect on neonatal survival in piglets

    Jørgensen, Claus Bøttcher, Anderson, S. I., Cirera, Susanna, Archibald, A., Raudsepp, T., Chowdhary, B., Edfors-Lilja, I., Andersson, L., Nielsen, B., Johannsen, M. N. & Fredholm, Merete, 2005. 1 p.

    Research output: Contribution to conferenceConference abstract for conferenceResearch

  18. 2006
  19. Published

    A high-fat, low-fibre diet affects gastrointestinal growth, function and microbiology in aged pigs

    Sangild, Per Torp, Thymann, Thomas, Cirera, Susanna, Fredholm, Merete, Caribe, N. & Olsen, J., 2006, Proceedings from LMC International Food Congress 2006. Taylor, p. 31 1 p. (Scandinavian Journal of Food and Nutrition, Vol. 50, Suppl. 1).

    Research output: Chapter in Book/Report/Conference proceedingConference abstract in proceedingsResearch

  20. Published

    Experimental infection with Escherichia coli O149:F4ac in weaned piglets

    Jensen, G. M., Frydendahl, K., Svendsen, O., Jørgensen, Claus Bøttcher, Cirera, Susanna, Fredholm, Merete, Nielsen, Jens Peter & Møller, K., 2006, In: Veterinary Microbiology. 115, 1-3, p. 243-249 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  21. Published

    Identification of a mutation in the CHAT gene associated with canine congenital myasthenic syndrome in old pointing dogs

    Proschowsky, Helle Friis, Flagstad, A., Cirera, Susanna, Jørgensen, Claus Bøttcher & Fredholm, Merete, 2006, Ikke angivet. Research School Klinik, p. 35-36 2 p.

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearch

  22. Published

    Isolation and characterization of 79 microsatellite markers from the American mink (Mustela vison)

    Anistoroaei, R. M., Farid, A., Benkel, B., Cirera, Susanna & Christensen, Knud Arnbjerg, 2006, In: Animal Genetics. 37, 2, p. 185-188 4 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  23. Published

    Linkage mapping of gene-associated SNPs to pig chromosome 11

    Sawera, M., Cirera, Susanna, Jørgensen, Claus Bøttcher, Gorodkin, Jan & Fredholm, Merete, 2006, In: Animal Genetics. 37, 3, p. 199-204 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  24. Published
  25. Published

    Molecular characterization of the porcine surfactant, pulmonary-associated protein C gene

    Cirera, Susanna, Hillig, A. N., Jensen, Henrik Elvang, Skovgaard, K., Boye, M. & Fredholm, Merete, 2006, In: Genomics. 88, 5, p. 659-668 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  26. 2007
  27. Published

    Characterization of the porcine carboxypeptidase E cDNA: comparative analysis and investigation of a non-synonymous SNP

    Hreidarsdôttir, G. E., Cirera, Susanna & Fredholm, Merete, 2007, In: Animal Biotechnology (Print Edition). 18, 1, p. 61-64 4 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  28. Published

    EST analysis on pig mitochondria reveal novel expression differences between developmental and adult tissues

    Scheibye-Alsing, K., Cirera, Susanna, Gilchrist, M. J., Fredholm, Merete & Gorodkin, Jan, 2007, In: BMC Genomics. 8, 367, 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  29. Published

    Identification of a mutation in the CHAT gene of Old Danish Pointing Dogs affected with congenital myasthenic syndrome

    Proschowsky, Helle Friis, Flagstad, A., Cirera, Susanna, Jørgensen, Claus Bøttcher & Fredholm, Merete, 2007, In: Journal of Heredity. 98, 5, p. 539-543 5 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  30. Published
  31. Published

    Selection of reference genes for gene expression studies in pig tissues using SYBR green qPCR

    Hillig, A. N., Jørgensen, Claus Bøttcher, Cirera, Susanna & Fredholm, Merete, 2007, In: BMC Molecular Biology. 8, 67, 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  32. 2008
  33. Published
  34. Published
  35. Published

    Porcine lung surfactant protein B gene (SFTPB): cDNA sequencing, chromosomal location, and expression studies

    Cirera, Susanna & Fredholm, Merete, 2008, In: Animal Biotechnology (Print Edition). 19, 3, p. 127-137 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  36. Published

    SNP-finding in pig mitochondrial ESTs

    Scheibye-Alsing, K., Cirera, Susanna, Gilchrist, M. J., Fredholm, Merete & Gorodkin, Jan, 2008, In: Animal Genetics. 39, 2, p. 193-195 3 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  37. 2009
  38. Published
  39. Published
  40. Published

    Characterization of phenotypically similar murine and porcine models of human lung emphysema

    Bruun, Camilla Vibeke Sichlau, Leifsson, Páll S., Jensen, Henrik Elvang, Johansen, L. K., Cirera, Susanna, Jørgensen, Claus Bøttcher, Nielsen, J. & Fredholm, Merete, 2009. 1 p.

    Research output: Contribution to conferenceConference abstract for conferenceResearch

  41. Published
  42. Published

    Mapping of genes involved in E. coli and helminth susceptibility in pigs

    Jacobsen, M. J., Nejsum, P., Joller, D., Bertschiner, H. U., Python, P., Edfors, I., Cirera, Susanna, Archibald, A. L., Churcher, C., Esteso, G., Bürgi, E., Karlskov-Mortensen, Peter, Andersson, L., Vögeli, P., Roepstorff, A. K., Göring, H. H., Anderson, T. J. C., Thamsborg, Stig Milan, Fredholm, Merete & Jørgensen, Claus Bøttcher, 2009, EAAP 2009. 1 p.

    Research output: Chapter in Book/Report/Conference proceedingConference abstract in proceedingsResearch

  43. Published

    Refined candidate region specified by haplotype sharing for Escherichia coli F4ab/F4ac susceptibility alleles in pigs

    Jacobsen, M. J., Kracht, S. S., Esteso, G., Cirera, Susanna, Edfors, I., Archibald, A. L., Bendixen, C., Andersson, L., Fredholm, Merete & Jørgensen, Claus Bøttcher, 2009, In: Animal Genetics. 41, 1, p. 21-25 5 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  44. Published

    Refined localization of the Escherichia coli F4ab/F4ac receptor locus on pig chromosome 13

    Joller, D., Jørgensen, Claus Bøttcher, Bertschinger, H. U., Python, P., Edfors, I., Cirera, Susanna, Archibald, A. L., Bürgi, E., Karlskov-Mortensen, Peter, Andersson, L., Fredholm, Merete & Vögeli, P., 2009, In: Animal Genetics. 40, 5, p. 749-752 4 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  45. Published

    Sequence assembly

    Scheibye-Alsing, K., Hoffmann, S., Frankel, A. M., Jensen, P., Stadler, P. F., Mang, Y., Tommerup, Niels, Gilchrist, M. J., Hillig, A. N., Cirera, Susanna, Jørgensen, Claus Bøttcher, Fredholm, Merete & Gorodkin, Jan, 2009, In: Computational Biology and Chemistry. 33, 2, p. 121-136 16 p.

    Research output: Contribution to journalReviewResearchpeer-review

  46. 2010
  47. Published

    A study of alternative splicing in the pig

    Hillig, A. N., Cirera, Susanna, Gilchrist, M. J., Gorodkin, Jan, Jørgensen, Claus Bøttcher & Fredholm, Merete, 2010, In: BMC Research Notes. 3, 123, 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  48. Published

    Expression profiles of miRNA-122 and its target CAT1 in minipigs (Sus scrofa) fed a high-cholesterol diet

    Cirera, Susanna, Birck, M. M., Busk, P. K. & Fredholm, Merete, 2010, In: Comparative Medicine. 60, 2, p. 136-141 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  49. Published

    Expression studies of the obesity candidate gene FTO in pig

    Madsen, M. B., Birck, M. M., Fredholm, Merete & Cirera, Susanna, 2010, In: Animal Biotechnology (Print Edition). 21, 1, p. 51-63 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  50. Published

    Investigation of tissue-specific human orthologous alternative splice events in pig

    Hillig, A. N., Jørgensen, Claus Bøttcher, Cirera, Susanna & Fredholm, Merete, 2010, In: Animal Biotechnology (Print Edition). 21, 4, p. 203-216 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  51. Published

    MicroRNA profiling in early hypertrophic growth of the left ventricle in rats

    Busk, P. K. & Cirera, Susanna, 2010, In: Biochemical and Biophysical Research Communications. 396, 4, p. 989-993 5 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  52. 2011
  53. Published

    Characterisation of five candidate genes within the ETEC F4ab/ac candidate region in pigs

    Jacobsen, M. J., Cirera, Susanna, Joller, D., Esteso, G., Kracht, S. S., Edfors, I., Bendixen, C., Archibald, A. L., Vogeli, P., Neuenschwander, S., Bertschinger, H. U., Rampoldi, A., Andersson, L., Fredholm, Merete & Jørgensen, Claus Bøttcher, 2011, In: BMC Research Notes. 4, 225, 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  54. Published

    Exonization of a LINE1 fragment implicated in X-linked hypohidrotic ectodermal dysplasia in cattle

    Karlskov-Mortensen, Peter, Cirera, Susanna, Nielsen, O. L., Arnbjerg, J., Reibel, Jesper, Fredholm, Merete & Agerholm, Jørgen Steen, 2011, In: Animal Genetics. 42, 6, p. 578-584 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  55. Published

    Global microRNA analysis of the NCI-60 cancer cell panel

    Søkilde, R., Kaczkowski, B., Podolska, A., Cirera, Susanna, Gorodkin, Jan, Møller, S. & Litman, T., 2011, In: Molecular Cancer Therapeutics. 10, 3, p. 375-384 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  56. Published

    How the RNA isolation method can affect microRNA microarray results

    Podolska, A., Kaczkowski, B., Litman, Thomas, Fredholm, Merete & Cirera, Susanna, 2011, In: Acta Biochimica Polonica. 58, 4, p. 535-540 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  57. Published

    Identification of 2 loci associated with development of myxomatous mitral valve disease in Cavalier King Charles Spaniels

    Madsen, M. B., Olsen, Lisbeth Høier, Häggström, J., Höglund, K., Ljungvall, I., Falk, B. T., Wess, G., Stephenson, H., Dukes-McEwan, J., Chetboul, V., Gouni, V., Proschowsky, Helle Friis, Cirera, Susanna, Karlskov-Mortensen, Peter & Fredholm, Merete, 2011, In: Journal of Heredity. 102, Suppl. 1, p. S62-S67 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  58. Published

    MicroRNA expression profiling of the porcine developing brain

    Podolska, A., Kaczkowski, B., Busk, P. K., Søkilde, R., Litman, T., Fredholm, Merete & Cirera, Susanna, 2011, In: P L o S One. 6, p. e14494 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  59. Published

    Specific and sensitive quantitative RT-PCR of miRNAs with DNA primers

    Balcells, I., Cirera, Susanna & Busk, P. K., 2011, In: BMC Biotechnology. 11, 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  60. 2012
  61. Published

    A deletion in the bovine FANCI gene compromises fertility by causing fetal death and brachyspina

    Charlier, C., Agerholm, Jørgen Steen, Coppieters, W., Karlskov-Mortensen, Peter, Li, W., Jong, G. D., Fasquelle, C., Karim, L., Cirera, Susanna, Gambisano, N., Ahariz, N., Mullaart, E., Georges, M. & Fredholm, Merete, 2012, In: PLoS ONE. 7, 8, 7 p., e43085.

    Research output: Contribution to journalJournal articleResearchpeer-review

  62. Published

    Genetic parameters for fatness-related traits in pigs: animal model for human obesity

    Kogelman, L., Mark, T., Karlskov-Mortensen, Peter, Bruun, C. S., Cirera, Susanna, Jørgensen, Claus Bøttcher, Fredholm, Merete & Kadarmideen, H., 2012.

    Research output: Contribution to conferencePosterResearchpeer-review

  63. 2013
  64. Published

    A Gly98Val mutation in the N-myc downstream regulated gene 1 (NDRG1) in Alaskan Malamutes with polyneuropathy

    Bruun, C. V. S., Jäderlund, K. H., Berendt, M., Jensen, K. B., Spodsberg, E-M. H., Gredal, H. B., Shelton, G. D., Mickelson, J. R., Minor, K. M., Lohi, H., Bjerkås, I., Stigen, Ø., Espenes, A., Rohdin, C., Edlund, R., Ohlsson, J., Cizinauskas, S., Leifsson, P. S., Drögemüller, C., Moe, L. & 2 others, Cirera, Susanna & Fredholm, Merete, 2013, In: PLOS one. 8, 2, p. 1-7 7 p., e54547.

    Research output: Contribution to journalJournal articleResearchpeer-review

  65. Published

    An F2 pig resource population as a model for genetic studies of obesity and obesity-related diseases in humans: design and genetic parameters

    Kogelman, L., Kadarmideen, H., Mark, T., Karlskov-Mortensen, Peter, Bruun, Camilla Vibeke Sichlau, Cirera, Susanna, Jacobsen, M. J., Jørgensen, Claus Bøttcher & Fredholm, Merete, 2013, In: Frontiers in Genetics. 4, 14 p., 29.

    Research output: Contribution to journalJournal articleResearchpeer-review

  66. Published

    Characterisation of gut microbiota in Ossabaw and Göttingen minipigs as models of obesity and metabolic syndrome

    Pedersen, R., Ingerslev, H., Sturek, M., Alloosh, M., Cirera, Susanna, Christoffersen, B. Ø., Moesgaard, S. G., Larsen, N. & Boye, M., 2013, In: PLOS ONE. 8, 2, 10 p., e56612.

    Research output: Contribution to journalJournal articleResearchpeer-review

  67. Published

    Characterization of a Small auxin-up RNA (SAUR)-like gene involved in Arabidopsis thaliana development

    Nektarios Markakis, M., Karolina Boron, A., Van Loock, B., Saini, K., Cirera, Susanna, Verbelen, J. & Vissenberg, K., 2013, In: PloS One. 8, 11, 13 p., e82596.

    Research output: Contribution to journalJournal articleResearchpeer-review

  68. Published

    Expression of innate immune genes, proteins and microRNAs in lung tissue of pigs infected experimentally with influenza virus (H1N2)

    Skovgaard, K., Cirera, Susanna, Vasby, Ditte Erika Leth, Podolska, A., Breum, S. Ø., Dürrwald, R., Schlegel, M. & Heegaard, P. M. H., 2013, In: Innate Immunity. 19, 5, p. 531-544 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  69. Published

    Extensive changes in innate immune gene expression in obese Göttingen minipigs do not lead to changes in concentrations of circulating cytokines and acute phase proteins

    Højbøge, T. R., Skovgaard, K., Moesgaard, S. G., Cirera, Susanna, Christoffersen, B. Ø. & Heegaard, P. M. H., 2013, In: Animal Genetics. 45, 1, p. 67-73 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  70. Published

    Functional characterization of a porcine emphysema model

    Bruun, Camilla Vibeke Sichlau, Jensen, Louise Kruse, Leifsson, Páll S., Nielsen, J., Cirera, Susanna, Jørgensen, Claus Bøttcher, Jensen, Henrik Elvang & Fredholm, Merete, 2013, In: Lung. 191, 6, p. 669-675 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  71. Published

    Global Analysis of Genetic and Epigenetic differences associated with Obesity

    Jacobsen, M. J., Mentzel, Caroline M. Junker, Kogelman, L., Mark, T., Karlskov-Mortensen, Peter, Bruun, Camilla Vibeke Sichlau, Cirera, Susanna, Gorodkin, Jan, Kadarmideen, H., Barrès, Romain, Jørgensen, Claus Bøttcher & Fredholm, Merete, 2013.

    Research output: Contribution to conferencePosterResearchpeer-review

  72. Published

    Highly efficient method for isolation of total RNA from adipose tissue

    Cirera, Susanna, 2013, In: BMC Research Notes. 6, 5 p., 472.

    Research output: Contribution to journalJournal articleResearchpeer-review

  73. Published

    New insights into the melanophilin (MLPH) gene controlling coat color phenotypes in American mink

    Cirera, Susanna, Markakis, M. N., Christensen, Knud Arnbjerg & Anistoroaei, R. M., 2013, In: Gene. 527, 1, p. 48-54 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  74. Published

    Orosomucoid expression profiles in liver, adipose tissues and serum of lean and obese domestic pigs, Göttingen minipigs and Ossabaw minipigs

    Højbøge, T. R., Stagsted, J., Christoffersen, B. Ø., Cirera, Susanna, Moesgaard, S. G., Sturek, M., Alloosh, M. & Heegaard, P. M. H., 2013, In: Veterinary Immunology and Immunopathology. 151, 3-4, p. 325-330 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  75. Published

    Plasma proANP and SDMA and microRNAs are associated with chronic mitral regurgitation in a pig model

    Cirera, Susanna, Moesgaard, S. G., Zois, N. E., Ravn, N., Goetze, Jens P. , Cremer, Signe Emilie, Teerlink, T., Leifsson, Páll S., Honge, J. L., Hasenkam, J. M. & Olsen, Lisbeth Høier, 2013, In: Endocrine Connections. 2, 3, p. 161-171 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  76. Published

    Potential role of the porcine superoxide dismutase 1 (SOD1) gene in pig reproduction

    Bjerre, D., Madsen, L. B., Mark, T., Cirera, Susanna, Larsen, K., Jørgensen, Claus Bøttcher & Fredholm, Merete, 2013, In: Animal Biotechnology (Print Edition). 24, 1, p. 1-9 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  77. Published

    Systems genetics analysis of obesity using RNA-Seq data

    Kogelman, L., Cirera, Susanna, Fredholm, Merete & Kadarmideen, H., 2013.

    Research output: Contribution to conferencePosterResearchpeer-review

  78. Published

    The pig as a model for studies of genomics of obesity and obesity related metabolic diseases

    Kadarmideen, H., Pant, S. D., Karlskov-Mortensen, Peter, Kogelman, L., Cirera, Susanna, Jacobsen, M. J., Bruun, Camilla Vibeke Sichlau, Jørgensen, Claus Bøttcher, Meuwissen, T. H. E. & Fredholm, Merete, 2013.

    Research output: Contribution to conferencePosterResearchpeer-review

  79. Published

    Gene expression in mesenteric lymph nodes of pigs with two different genotypes associated with resistance or susceptibility to Ascaris suum

    Skallerup, P., Nejsum, P., Jørgensen, Claus Bøttcher, Cirera, Susanna, Skovgaard, K., Pipper, C. B., Fredholm, Merete & Thamsborg, Stig Milan, 26 Aug 2013.

    Research output: Contribution to conferencePosterResearchpeer-review

  80. Published

    Gene expression in mesenteric lymph nodes of pigs with two different genotypes associated with resistance or susceptibility to Ascaris suum

    Skallerup, P., Nejsum, P., Jørgensen, Claus Bøttcher, Cirera, Susanna, Skovgaard, K., Pipper, C. B., Fredholm, Merete & Thamsborg, Stig Milan, 10 Sep 2013.

    Research output: Contribution to conferencePosterResearchpeer-review

  81. 2014
  82. Published

    Expression studies of six human obesity-related genes in seven tissues from divergent pig breeds

    Cirera, Susanna, Jensen, M. S., Elbrønd, V. S., Moesgaard, S. G., Christoffersen, B. O., Kadarmideen, H., Skovgaard, K., Bruun, Camilla Vibeke Sichlau, Karlskov-Mortensen, Peter, Jørgensen, Claus Bøttcher & Fredholm, Merete, 2014, In: Animal Genetics. 45, 1, p. 59-66 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  83. Published

    Extensive changes in innate immune gene expression in obese Gottingen minipigs do not lead to changes in concentrations of circulating cytokines and acute phase proteins

    Højbøge, T. R., Skovgaard, K., Moesgaard, S. G., Cirera, Susanna, Christoffersen, B. Ø. & Heegaard, P. M. H., 2014, In: Animal Genetics. 45, 1, p. 67-73 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  84. Published

    Functional network analysis of obese and lean Göttingen minipigs elucidates changes in oxidative and inflammatory networks in obese pigs

    Boonen, H. C. M., Moesgaard, S. G., Birck, M. M., Christoffersen, B. Ø., Cirera, Susanna, Heegaard, P. M. H., Højbøge, T. R., Jensen, Lars Jørn, Mortensen, A., Olsen, Lisbeth Høier, Sheykhzade, Majid, Tang, J. & Lykkesfeldt, Jens, 2014, In: Pflügers ARchiv (European Journal of Physiology). 466, 12, p. 2167-2176 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  85. Published

    Genome-wide Linkage Disequilibrium Linkage Analysis (LDLA) of Body Fat Traits in an F2 Porcine Model for Human Obesity

    Pant, S. D., Karlskov-Mortensen, Peter, Cirera, Susanna, Kogelman, L., Jacobsen, M. J., Bruun, Camilla Vibeke Sichlau, Jørgensen, Claus Bøttcher, Meuwissen, T. H. E., Kadarmideen, H. & Fredholm, Merete, 2014. 4 p.

    Research output: Contribution to conferencePosterResearchpeer-review

  86. Published

    Identification of co-expression gene networks, regulatory genes and pathways for obesity based on adipose tissue RNA Sequencing in a porcine model

    Kogelman, L., Cirera, Susanna, Zhernakova, D. V., Fredholm, Merete, Franke, L. & Kadarmideen, H., 2014, In: B M C Genomics. 7, 16 p., 57.

    Research output: Contribution to journalJournal articleResearchpeer-review

  87. Published

    Quantification of miRNAs by a simple and specific qPCR method

    Cirera, Susanna & Busk, P. K., 2014, In: Methods in Molecular Biology. 1182, p. 73-81 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  88. Published

    Strong association between activated valvular interstitial cells and histopathological lesions in porcine model of induced mitral regurgitation

    Cremer, Signe Emilie, Zois, N. E., Moesgaard, S. G., Ravn, N., Cirera, Susanna, Honge, J. L., Smerup, M. H., Hasenkam, J. M., Sloth, E., Leifsson, Páll S., Falk, B. T., Oyama, M. A., Orton, C., Martinussen, Torben & Olsen, Lisbeth Høier, 2014, In: International Journal of Cardiology. 174, 2, p. 443-446 4 p.

    Research output: Contribution to journalLetterResearchpeer-review

  89. Published

    Systems biology and RNA-Seq analyses to detect biomarkers for metabolic syndrome in a porcine model

    Mantas, P., Kogelman, L., Cirera, Susanna, Fredholm, Merete & Kadarmideen, H., 2014.

    Research output: Contribution to conferenceConference abstract for conferenceResearchpeer-review

  90. Published

    Systems genetics analysis of RNA-Seq data to unravel the genetics of obesity using a porcine model

    Kogelman, L., Zhernakova, D. V., Westra, H., Cirera, Susanna, Fredholm, Merete, Franke, L. & Kadarmideen, H., 2014.

    Research output: Contribution to conferenceConference abstract for conferenceResearchpeer-review

  91. Published

    Systems genetics analysis of obesity using RNA-Seq data in an F2 pig resource population

    Kogelman, L., Zhernakova, D. V., Westra, H., Cirera, Susanna, Fredholm, Merete, Franke, L. & Kadarmideen, H., 2014, Proceedings, 10th World Congress of Genetics Applied to Livestock Production. 3 p.

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  92. Published

    Wet-lab Tested MicroRNA Assays for qPCR Studies with SYBR®Green and DNA Primers in Pig Tissues

    Mentzel, Caroline M. Junker, Skovgaard, K., Cordoba, S., Herrera Uribe, J., Busk, P. K. & Cirera, Susanna, 26 Dec 2014, In: MicroRNA. 3, 3, p. 174-88 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  93. 2015
  94. Published
  95. Published

    Serotonin markers show altered transcription levels in an experimental pig model of mitral regurgitation

    Cremer, Signe Emilie, Zois, N. E., Moesgaard, S. G., Ravn, N., Cirera, Susanna, Honge, J. L., Smerup, M. H., Hasenkam, J. M., Sloth, E., Leifsson, Páll S., Falk, B. T., Oyama, M. A., Orton, C., Martinussen, Torben & Olsen, Lisbeth Høier, 2015, In: The Veterinary Journal. 203, 2, p. 192-198 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  96. Published

    Alpha-smooth muscle actin and serotonin receptors 2A and 2B in dogs with myxomatous mitral valve disease

    Cremer, Signe Emilie, Moesgaard, S. G., Rasmussen, C. E., Zois, N. E., Falk, T., Reimann, Maria Josefine, Cirera, Susanna, Aupperle, H., Oyama, M. A. & Olsen, Lisbeth Høier, 19 Mar 2015, In: Research in Veterinary Science. 100, p. 197-206 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  97. Published

    Gender and obesity specific MicroRNA expression in adipose tissue from lean and obese pigs

    Mentzel, Caroline M. Junker, Anthon, Christian, Jacobsen, M. J., Karlskov-Mortensen, Peter, Bruun, Camilla Vibeke Sichlau, Jørgensen, Claus Bøttcher, Gorodkin, Jan, Cirera, Susanna & Fredholm, Merete, 29 Jul 2015, In: P L o S One. 10, 7, 19 p., e0131650.

    Research output: Contribution to journalJournal articleResearchpeer-review

  98. Published

    Comparative analyses of QTLs influencing obesity and metabolic phenotypes in pigs and humans

    Pant, S. D., Karlskov-Mortensen, Peter, Jacobsen, M. J., Cirera, Susanna, Kogelman, L., Bruun, Camilla Vibeke Sichlau, Mark, T., Jørgensen, Claus Bøttcher, Grarup, Niels, Appel, E. V. R., Galjatovic, E. A. A., Hansen, T., Pedersen, Oluf Borbye, Guerin, M., Huby, T., Lesnik, P., Meuwissen, T. H. E., Kadarmideen, H. & Fredholm, Merete, 8 Sep 2015, In: PLOS ONE. 10, 9, 22 p., e0137356.

    Research output: Contribution to journalJournal articleResearchpeer-review

  99. Published

    An integrative systems genetics approach reveals potential causal genes and pathways related to obesity

    Kogelman, L., Zhernakova, D. V., Westra, H., Cirera, Susanna, Fredholm, Merete, Franke, L. & Kadarmideen, H., 20 Oct 2015, In: Genome Medicine. 7, 15 p., 105.

    Research output: Contribution to journalJournal articleResearchpeer-review

  100. Published

    Expression study of GLUT4 translocation-related genes in a porcine pre-diabetic model

    Kristensen, Thea, Fredholm, Merete & Cirera, Susanna, Dec 2015, In: Mammalian Genome. 26, 11, p. 650-657 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  101. Published

    Comparison of American mink embryonic stem and induced pluripotent stem cell transcriptomes

    Menzorov, A. G., Matveeva, N. M., Markakis, M. N., Fishman, V. S., Christensen, Knud Arnbjerg, Khabarova, A. A., Pristyazhnyuk, I. E., Kizilova, E. A., Cirera, Susanna, Anistoroaei, R. M. & Serov, O. L., 16 Dec 2015, In: BMC Genomics. 16 , Suppl. 13, 12 p., 56.

    Research output: Contribution to journalJournal articleResearchpeer-review

  102. 2016
  103. Published

    Identification of protein-damaging mutations in 10 swine taste receptors and 191 appetite-reward genes

    Clop, A., Sharaf, A., Castelló, A., Ramos-Onsins, S., Cirera, Susanna, Mercadé, A., Derdak, S., Beltran, S., Huisman, A., Fredholm, Merete, van As, P. & Sánchez, A., 2016, In: BMC Genomics. 17, 17 p., 685.

    Research output: Contribution to journalJournal articleResearchpeer-review

  104. Published

    Neurosphere based differentiation of human iPSC improves astrocyte differentiation

    Zhou, S., Szczesna, K., Ochalek, A., Kobolák, J., Varga, E., Nemes, C., Chandrasekaran, A., Rasmussen, M., Cirera, Susanna, Hyttel, P., Dinnyés, A., Freude, Kristine & Avci, H. X., 2016, In: Stem Cells International. 2016, 15 p., 4937689.

    Research output: Contribution to journalJournal articleResearchpeer-review

  105. Published

    Physical training and weight loss in dogs lead to transcriptional changes in genes involved in the glucose-transport pathway in muscle and adipose tissues

    Herrera Uribe, J., Vitger, Anne Désiré, Ritz, C., Fredholm, Merete, Bjørnvad, Charlotte Reinhard & Cirera, Susanna, 2016, In: The Veterinary Journal. 208, p. 22-27 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  106. Published

    Transcriptional analysis of porcine intestinal mucosa infected with Salmonella Typhimurium revealed a massive inflammatory response and disruption of bile acid absorption in ileum

    Uribe, J. H., Collado-Romero, M., Zaldívar-López, S., Arce, C., Bautista, R., Carvajal, A., Cirera, Susanna, Claros, M. G. & Garrido, J. J., 2016, In: Veterinary Research. 47, 10 p., 11.

    Research output: Contribution to journalJournal articleResearchpeer-review

  107. Published

    A large insertion in intron 2 of the TYRP1 gene associated with American Palomino phenotype in American mink

    Cirera, Susanna, Markakis, M. N., Kristensen, Thea, Vissenberg, K., Fredholm, Merete, Christensen, Knud Arnbjerg & Anistoroaei, R. M., Apr 2016, In: Mammalian Genome. 27, 3, p. 135-143 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  108. Published

    Hepatic expression of inflammatory genes and microRNAs in pigs with high "cholesteryl ester transfer protein" (CETP) activity

    Cirera, Susanna, Tørsleff, B. C. J., Ritz, C., Fredholm, Merete, Heegaard, P. M. H. & Skovgaard, K., 30 May 2016, In: Mammalian Genome. 27, 9, p. 503-510 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  109. Published

    The positional identity of iPSC-derived neural progenitor cells along the anterior-posterior axis is controlled in a dosage-dependent manner by bFGF and EGF

    Zhou, S., Ochalek, A., Szczesna, K., Avci, H. X., Kobolak, J., Varga, E., Rasmussen, M., Holst, B., Cirera, Susanna, Hyttel, P., Freude, Kristine & Dinnyes, A., Oct 2016, In: Differentiation. 92, 4, p. 183-194 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  110. Published

    Adipocyte gene expression and DNA methylation patterns differ significantly between lean and obese pigs

    Jacobsen, M. J., Havgaard, Jakob Hull, Mentzel, Caroline M. Junker, Sørensen, P. M., Pundhir, Sachin, Anthon, Christian, Karlskov-Mortensen, Peter, Bruun, Camilla Vibeke Sichlau, Cirera, Susanna, Gorodkin, Jan, Jørgensen, Claus Bøttcher, Barrès, Romain & Fredholm, Merete, 9 Nov 2016, In: Journal of Animal Science. 94, Supplement 4, p. 46-47 2 p., P2019.

    Research output: Contribution to journalConference abstract in journalResearchpeer-review

  111. Published

    Focus on atherosclerosis and the pig as a model to identify genes affecting cholesterol and other plasma lipid levels.

    Karlskov-Mortensen, Peter, Frederiksen, S. D., Pant, S. D., Cirera, Susanna, Jørgensen, Claus Bøttcher, Bruun, Camilla Vibeke Sichlau, Mark, T. & Fredholm, Merete, 9 Nov 2016, In: Journal of Animal Science. 94, Supplement4, p. 152-152 1 p., P6009.

    Research output: Contribution to journalConference abstract in journalResearchpeer-review

  112. Published

    Joint profiling of miRNAs and mRNAs reveals miRNA mediated gene regulation in the Göttingen minipig obesity model

    Mentzel, Caroline M. Junker, Alkan, F., Keinicke, H., Jacobsen, M. J., Gorodkin, Jan, Fredholm, Merete & Cirera, Susanna, 30 Nov 2016, In: P L o S One. 11, 11, 16 p., e0167285.

    Research output: Contribution to journalJournal articleResearchpeer-review

  113. 2017
  114. Published
  115. Published

    Evaluation of microRNA stability in plasma and serum from healthy dogs

    Enelund, L., Nielsen, Lise Nikolic & Cirera, Susanna, 2017, In: MicroRNA. 6, 1, p. 42-52 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  116. Published

    FEELnc: A tool for long non-coding RNA annotation and its application to the dog transcriptome

    Wucher, V., Legeai, F., Hédan, B., Rizk, G., Lagoutte, L., Leeb, T., Jagannathan, V., Cadieu, E., David, A., Lohi, H., Cirera Salicio, S., Fredholm, M., Botherel, N., Leegwater, P. A. J., Le Béguec, C., Fieten, H., Johnson, J. J., Alföldi, J., André, C., Lindblad-Toh, K. & 2 others, Hitte, C. & Derrien, T., 2017, In: Nucleic Acids Research. 45, 8, 12 p., e57.

    Research output: Contribution to journalJournal articleResearchpeer-review

  117. Published

    Fat and carbohydrate content in the diet induces drastic changes in gene expression in young Göttingen minipigs

    Mentzel, Caroline M. Junker, Figueiredo Cardoso, T., Haagensen, A. M. J., Sørensen, Dorte Bratbo, Fredholm, Merete & Cirera, Susanna, 2017, In: Mammalian Genome. 28, 5-6, p. 166-175 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

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