Predicting the distribution of Ixodes ricinus and Dermacentor reticulatus in Europe: a comparison of climate niche modelling approaches

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Predicting the distribution of Ixodes ricinus and Dermacentor reticulatus in Europe : a comparison of climate niche modelling approaches. / Noll, Madeleine; Wall, Richard; Makepeace, Benjamin L.; Newbury, Hannah; Adaszek, Lukasz; Bødker, René; Estrada-Peña, Agustín; Guillot, Jacques; da Fonseca, Isabel Pereira; Probst, Julia; Overgaauw, Paul; Strube, Christina; Zakham, Fathiah; Zanet, Stefania; Rose Vineer, Hannah.

In: Parasites and Vectors, Vol. 16, 384, 2023.

Research output: Contribution to journalJournal articleResearchpeer-review

Harvard

Noll, M, Wall, R, Makepeace, BL, Newbury, H, Adaszek, L, Bødker, R, Estrada-Peña, A, Guillot, J, da Fonseca, IP, Probst, J, Overgaauw, P, Strube, C, Zakham, F, Zanet, S & Rose Vineer, H 2023, 'Predicting the distribution of Ixodes ricinus and Dermacentor reticulatus in Europe: a comparison of climate niche modelling approaches', Parasites and Vectors, vol. 16, 384. https://doi.org/10.1186/s13071-023-05959-y

APA

Noll, M., Wall, R., Makepeace, B. L., Newbury, H., Adaszek, L., Bødker, R., Estrada-Peña, A., Guillot, J., da Fonseca, I. P., Probst, J., Overgaauw, P., Strube, C., Zakham, F., Zanet, S., & Rose Vineer, H. (2023). Predicting the distribution of Ixodes ricinus and Dermacentor reticulatus in Europe: a comparison of climate niche modelling approaches. Parasites and Vectors, 16, [384]. https://doi.org/10.1186/s13071-023-05959-y

Vancouver

Noll M, Wall R, Makepeace BL, Newbury H, Adaszek L, Bødker R et al. Predicting the distribution of Ixodes ricinus and Dermacentor reticulatus in Europe: a comparison of climate niche modelling approaches. Parasites and Vectors. 2023;16. 384. https://doi.org/10.1186/s13071-023-05959-y

Author

Noll, Madeleine ; Wall, Richard ; Makepeace, Benjamin L. ; Newbury, Hannah ; Adaszek, Lukasz ; Bødker, René ; Estrada-Peña, Agustín ; Guillot, Jacques ; da Fonseca, Isabel Pereira ; Probst, Julia ; Overgaauw, Paul ; Strube, Christina ; Zakham, Fathiah ; Zanet, Stefania ; Rose Vineer, Hannah. / Predicting the distribution of Ixodes ricinus and Dermacentor reticulatus in Europe : a comparison of climate niche modelling approaches. In: Parasites and Vectors. 2023 ; Vol. 16.

Bibtex

@article{a1ea6150da214c9e916f56b2d00b741d,
title = "Predicting the distribution of Ixodes ricinus and Dermacentor reticulatus in Europe: a comparison of climate niche modelling approaches",
abstract = "Background: The ticks Ixodes ricinus and Dermacentor reticulatus are two of the most important vectors in Europe. Climate niche modelling has been used in many studies to attempt to explain their distribution and to predict changes under a range of climate change scenarios. The aim of this study was to assess the ability of different climate niche modelling approaches to explain the known distribution of I. ricinus and D. reticulatus in Europe. Methods: A series of climate niche models, using different combinations of input data, were constructed and assessed. Species occurrence records obtained from systematic literature searches and Global Biodiversity Information Facility data were thinned to different degrees to remove sampling spatial bias. Four sources of climate data were used: bioclimatic variables, WorldClim, TerraClimate and MODIS satellite-derived data. Eight different model training extents were examined and three modelling frameworks were used: maximum entropy, generalised additive models and random forest models. The results were validated through internal cross-validation, comparison with an external independent dataset and expert opinion. Results: The performance metrics and predictive ability of the different modelling approaches varied significantly within and between each species. Different combinations were better able to define the distribution of each of the two species. However, no single approach was considered fully able to capture the known distribution of the species. When considering the mean of the performance metrics of internal and external validation, 24 models for I. ricinus and 11 models for D. reticulatus of the 96 constructed were considered adequate according to the following criteria: area under the receiver-operating characteristic curve > 0.7; true skill statistic > 0.4; Miller{\textquoteright}s calibration slope 0.25 above or below 1; Boyce index > 0.9; omission rate < 0.15. Conclusions: This comprehensive analysis suggests that there is no single {\textquoteleft}best practice{\textquoteright} climate modelling approach to account for the distribution of these tick species. This has important implications for attempts to predict climate-mediated impacts on future tick distribution. It is suggested here that climate variables alone are not sufficient; habitat type, host availability and anthropogenic impacts, not included in current modelling approaches, could contribute to determining tick presence or absence at the local or regional scale. Graphical abstract: [Figure not available: see fulltext.].",
keywords = "Climate change, Climate niche, Climate niche modelling, Dermacentor, Ixodes, Species distribution modelling, Ticks",
author = "Madeleine Noll and Richard Wall and Makepeace, {Benjamin L.} and Hannah Newbury and Lukasz Adaszek and Ren{\'e} B{\o}dker and Agust{\'i}n Estrada-Pe{\~n}a and Jacques Guillot and {da Fonseca}, {Isabel Pereira} and Julia Probst and Paul Overgaauw and Christina Strube and Fathiah Zakham and Stefania Zanet and {Rose Vineer}, Hannah",
note = "Publisher Copyright: {\textcopyright} 2023, BioMed Central Ltd., part of Springer Nature.",
year = "2023",
doi = "10.1186/s13071-023-05959-y",
language = "English",
volume = "16",
journal = "Parasites & Vectors",
issn = "1756-3305",
publisher = "BioMed Central",

}

RIS

TY - JOUR

T1 - Predicting the distribution of Ixodes ricinus and Dermacentor reticulatus in Europe

T2 - a comparison of climate niche modelling approaches

AU - Noll, Madeleine

AU - Wall, Richard

AU - Makepeace, Benjamin L.

AU - Newbury, Hannah

AU - Adaszek, Lukasz

AU - Bødker, René

AU - Estrada-Peña, Agustín

AU - Guillot, Jacques

AU - da Fonseca, Isabel Pereira

AU - Probst, Julia

AU - Overgaauw, Paul

AU - Strube, Christina

AU - Zakham, Fathiah

AU - Zanet, Stefania

AU - Rose Vineer, Hannah

N1 - Publisher Copyright: © 2023, BioMed Central Ltd., part of Springer Nature.

PY - 2023

Y1 - 2023

N2 - Background: The ticks Ixodes ricinus and Dermacentor reticulatus are two of the most important vectors in Europe. Climate niche modelling has been used in many studies to attempt to explain their distribution and to predict changes under a range of climate change scenarios. The aim of this study was to assess the ability of different climate niche modelling approaches to explain the known distribution of I. ricinus and D. reticulatus in Europe. Methods: A series of climate niche models, using different combinations of input data, were constructed and assessed. Species occurrence records obtained from systematic literature searches and Global Biodiversity Information Facility data were thinned to different degrees to remove sampling spatial bias. Four sources of climate data were used: bioclimatic variables, WorldClim, TerraClimate and MODIS satellite-derived data. Eight different model training extents were examined and three modelling frameworks were used: maximum entropy, generalised additive models and random forest models. The results were validated through internal cross-validation, comparison with an external independent dataset and expert opinion. Results: The performance metrics and predictive ability of the different modelling approaches varied significantly within and between each species. Different combinations were better able to define the distribution of each of the two species. However, no single approach was considered fully able to capture the known distribution of the species. When considering the mean of the performance metrics of internal and external validation, 24 models for I. ricinus and 11 models for D. reticulatus of the 96 constructed were considered adequate according to the following criteria: area under the receiver-operating characteristic curve > 0.7; true skill statistic > 0.4; Miller’s calibration slope 0.25 above or below 1; Boyce index > 0.9; omission rate < 0.15. Conclusions: This comprehensive analysis suggests that there is no single ‘best practice’ climate modelling approach to account for the distribution of these tick species. This has important implications for attempts to predict climate-mediated impacts on future tick distribution. It is suggested here that climate variables alone are not sufficient; habitat type, host availability and anthropogenic impacts, not included in current modelling approaches, could contribute to determining tick presence or absence at the local or regional scale. Graphical abstract: [Figure not available: see fulltext.].

AB - Background: The ticks Ixodes ricinus and Dermacentor reticulatus are two of the most important vectors in Europe. Climate niche modelling has been used in many studies to attempt to explain their distribution and to predict changes under a range of climate change scenarios. The aim of this study was to assess the ability of different climate niche modelling approaches to explain the known distribution of I. ricinus and D. reticulatus in Europe. Methods: A series of climate niche models, using different combinations of input data, were constructed and assessed. Species occurrence records obtained from systematic literature searches and Global Biodiversity Information Facility data were thinned to different degrees to remove sampling spatial bias. Four sources of climate data were used: bioclimatic variables, WorldClim, TerraClimate and MODIS satellite-derived data. Eight different model training extents were examined and three modelling frameworks were used: maximum entropy, generalised additive models and random forest models. The results were validated through internal cross-validation, comparison with an external independent dataset and expert opinion. Results: The performance metrics and predictive ability of the different modelling approaches varied significantly within and between each species. Different combinations were better able to define the distribution of each of the two species. However, no single approach was considered fully able to capture the known distribution of the species. When considering the mean of the performance metrics of internal and external validation, 24 models for I. ricinus and 11 models for D. reticulatus of the 96 constructed were considered adequate according to the following criteria: area under the receiver-operating characteristic curve > 0.7; true skill statistic > 0.4; Miller’s calibration slope 0.25 above or below 1; Boyce index > 0.9; omission rate < 0.15. Conclusions: This comprehensive analysis suggests that there is no single ‘best practice’ climate modelling approach to account for the distribution of these tick species. This has important implications for attempts to predict climate-mediated impacts on future tick distribution. It is suggested here that climate variables alone are not sufficient; habitat type, host availability and anthropogenic impacts, not included in current modelling approaches, could contribute to determining tick presence or absence at the local or regional scale. Graphical abstract: [Figure not available: see fulltext.].

KW - Climate change

KW - Climate niche

KW - Climate niche modelling

KW - Dermacentor

KW - Ixodes

KW - Species distribution modelling

KW - Ticks

U2 - 10.1186/s13071-023-05959-y

DO - 10.1186/s13071-023-05959-y

M3 - Journal article

C2 - 37880680

AN - SCOPUS:85174863238

VL - 16

JO - Parasites & Vectors

JF - Parasites & Vectors

SN - 1756-3305

M1 - 384

ER -

ID: 390413732