Veterinary Clinical Microbiology

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  1. 2021
  2. Published

    Characterization of a Streptococcus species isolated from Siganus guttatus in South China

    Li, L., Wang, C., Olsen, Rikke Heidemann, Li, X., Meng, H., Xu, L. & Shi, L., 2021, In: Aquaculture. 545, 737163.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Classification of bisgaard’s taxa 14 and 32 and a taxon from kestrels demonstrating satellitic growth and proposal of spirabiliibacterium gen. nov., including the description of three species: spirabiliibacterium mucosae sp. nov., spirabiliibacterium pneumoniae sp. nov. and spirabiliibacterium falconis sp. nov.

    Bisgaard, M. & Christensen, Henrik, 2021, In: International Journal of Systematic and Evolutionary Microbiology. 71, 3, 004758.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Clonal spread of multi-resistant Gallibacterium anatis isolates among Iranian broilers and layers

    Allahghadry, T., Ng, D. Y. K., Dibaei, A. & Bojesen, Anders Miki, 2021, In: Veterinary Research. 52, 27.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Co-circulation of multiple influenza a reassortants in swine harboring genes from seasonal human and swine influenza viruses

    Ryt-Hansen, Pia, Krog, J. S., Breum, S. Ø., Hjulsager, C. K., Pedersen, A. G., Trebbien, R. & Larsen, Lars, 2021, In: eLife. 10, 24 p., e60940.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Co-occurrence of antimicrobial and metal resistance genes in pig feces and agricultural fields fertilized with slurry

    Peng, S., Zheng, H., Herrero-Fresno, A., Olsen, John Elmerdahl, Dalsgaard, Anders & Ding, Z., 2021, In: Science of the Total Environment. 792, 148259.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Design of a High-Throughput Real-Time PCR System for Detection of Bovine Respiratory and Enteric Pathogens

    Goecke, Nicole Bakkegård, Nielsen, B. H., Petersen, Mette Bisgaard & Larsen, Lars, 2021, In: Frontiers in Veterinary Science. 8, 677993.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Detection of Atypical Porcine Pestivirus in Piglets from Danish Sow Herds

    Pedersen, K., Kristensen, C. S., Strandbygaard, B., Bøtner, A. & Rasmussen, T. B., 2021, In: Viruses. 13, 5, 717.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Determination of the pharmacokinetic-pharmacodynamic cut-off values of marbofloxacin in horses to support the establishment of a clinical breakpoint for antimicrobial susceptibility testing

    Bousquet-Mélou, A., Schneider, M., El Garch, F., Broussou, D. C., Ferran, A. A., Lallemand, E. A., Triboulloy, C., Damborg, Peter Panduro & Toutain, P. L., 2021, In: Equine Veterinary Journal. 53, 5, p. 1047-1055

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Development of an aerogenous Escherichia coli infection model in adult broiler breeders

    Kromann, Sofie, Olsen, Rikke Heidemann, Bojesen, Anders Miki, Jensen, Henrik Elvang & Thoefner, Ida , 2021, In: Scientific Reports. 11, 15 p., 19556.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Did giraffe cardiovascular evolution solve the problem of heart failure with preserved ejection fraction?

    Natterson-Horowitz, B., Baccouche, B. M., Mary, J., Shivkumar, T., Bertelsen, Mads Frost, Aalkjær, C., Smerup, Morten Holdgaard, Ajijola, O. A., Hadaya, J. & Wang, T., 2021, In: Evolution, Medicine, and Public Health. 9, 1, p. 248-255 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Dogs are carriers of Clostridioides difficile lineages associated with human community-acquired infections

    Bjöersdorff, O. G., Lindberg, S., Kiil, K., Persson, S., Guardabassi, Luca & Damborg, Peter Panduro, 2021, In: Anaerobe. 67, 102317.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Driving laboratory standardization of bacterial culture and antimicrobial susceptibility testing in veterinary clinical microbiology in Europe and beyond

    Timofte, D., Broens, E. M., Guardabassi, Luca, Pomba, C., Allerton, F., Ikonomopoulos, J., Overesch, G. & Damborg, Peter Panduro, 2021, In: Journal of Clinical Microbiology. 59, 6, e02572-20.

    Research output: Contribution to journal › Review › Research › peer-review

  14. Published

    Duo: A Signature Based Method to Batch-Analyze Functional Similarities of Proteins

    Fei, Xiao, Li, Q., Olsen, John Elmerdahl & Jiao, X., 2021, In: Frontiers in Microbiology. 12, 698322.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    ESBL and AmpC β-Lactamase Encoding Genes in E. coli From Pig and Pig Farm Workers in Vietnam and Their Association With Mobile Genetic Elements

    Hounmanou, Yaovi Mahuton Gildas, Bortolaia, V., Dang, S. T. T., Truong, D., Olsen, John Elmerdahl & Dalsgaard, Anders, 2021, In: Frontiers in Microbiology. 12, 14 p., 629139.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Effect of Detergents on Morphology, Size Distribution, and Concentration of Copolymer-Based Polymersomes

    Górecki, R., Antenucci, F., Norinkevicius, K., Elmstrøm Christiansen, L., Myers, S. T., Trzaskuś, K. & Hélix-Nielsen, C., 2021, In: Langmuir. 37, 6, p. 2079–2090

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Efficacy of a novel antimicrobial hydrogel for eradication of Staphylococcus epidermidis, Staphylococcus aureus and Cutibacterium acnes from preformed biofilm and treatment performance in an in vivo MRSA wound model

    Ronco, T., Aragao, M. F., Svenningsen, Søren Wedel, Christensen, Jørn Bolstad, Permin, A., Saaby, Lasse, Bionda, N., Lantz, E. E. & Olsen, Rikke Heidemann, 2021, In: JAC-Antimicrobial Resistance. 3, 3, 7 p., dlab108.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Enteral broad-spectrum antibiotics antagonize the effect of fecal microbiota transplantation in preterm pigs

    Brunse, Anders, Offersen, Simone Margaard, Mosegaard, J. J., Deng, Ling, Damborg, Peter Panduro, Nielsen, Dennis Sandris, Sangild, Per Torp, Thymann, Thomas & Nguyen, Duc Ninh, 2021, In: Gut Microbes. 13, 1, p. 1-16 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Estimating Clinically Relevant Cut-Off Values for a High-Throughput Quantitative Real-Time PCR Detecting Bacterial Respiratory Pathogens in Cattle

    Klompmaker, A. F., Brydensholt, M., Michelsen, Anne Marie, Denwood, Matt, Kirkeby, Carsten, Larsen, Lars, Goecke, Nicole Bakkegård, Dam Otten, Nina & Nielsen, Liza Rosenbaum, 2021, In: Frontiers in Veterinary Science. 8, 674771.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Evaluating a tylosin dosage regimen for treatment of Staphylococcus delphini infection in mink (Neovison vison): a pharmacokinetic-pharmacodynamic approach

    Ronaghinia, A. A., Birch, Julie Knippel Melsted, Frandsen, H. L., Toutain, P. L., Damborg, Peter Panduro & Struve, T., 2021, In: Veterinary Research. 52, 1, 16 p., 34.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    First Report of a Foodborne Salmonella enterica Serovar Gloucester (4:i:l,w) ST34 Strain Harboring blaCTX–M–55 and qnrS Genes Located in IS26-Mediated Composite Transposon

    Li, L., Olsen, Rikke Heidemann, Song, A., Xiao, J., Wang, C., Meng, H. & Shi, L., 2021, In: Frontiers in Microbiology. 12, 646101.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    First report of two foodborne Salmonella enterica subsp. enterica serovar Bovismorbificans isolates carrying a novel mega-plasmid harboring blaDHA-1 and qnrB4 genes

    Li, L., Olsen, Rikke Heidemann, Wang, C., Song, A., Xiao, J., Meng, H., Ronco, T. & Shi, L., 2021, In: International Journal of Food Microbiology. 360, 109439.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Foot-and-mouth disease in animals

    Belsham, Graham John, Bøtner, A. G. & Lohse, L., 2021, MSD Manual-Veterinary Manual.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Communication

  24. Published

    Foot-and-mouth disease viruses of the O/ME-SA/Ind-2001e sublineage in Pakistan

    Jamal, S. M., Khan, S., Knowles, N. J., Wadsworth, J., Hicks, H. M., Mioulet, V., Bin-Tarif, A., Ludi, A. B., Shah, S. A. A., Abubakar, M., Manzoor, S., Afzal, M., Eschbaumer, M., King, D. P. & Belsham, Graham John, 2021, In: Transboundary and Emerging Diseases. 68, 6, p. 3126-3135 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Full-genome sequences of alphacoronaviruses and astroviruses from myotis and pipistrelle bats in denmark

    Lazov, C. M., Belsham, Graham John, Bøtner, A. & Rasmussen, T. B., 2021, In: Viruses. 13, 6, 1073.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Genetic Comparison of ESBL-Producing Escherichia coli from Workers and Pigs at Vietnamese Pig Farms

    Truong, D. T. Q., Hounmanou, Yaovi Mahuton Gildas, Dang, S. T. T., Olsen, John Elmerdahl, Truong, G. T. H., Tran, N. T., Scheutz, F. & Dalsgaard, Anders, 2021, In: Antibiotics. 10, 10, 1165.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Genome-resolved metagenomics suggests a mutualistic relationship between Mycoplasma and salmonid hosts

    Rasmussen, Jacob Agerbo, Villumsen, Kasper Rømer, Duchene, David, Puetz, Lara Christine, Delmont, T. O., Sveier, H., Jørgensen, Louise von Gersdorff, Præbel, K., Martin, M. D., Bojesen, Anders Miki, Gilbert, M Thomas P, Kristiansen, Karsten & Limborg, Morten Tønsberg, 2021, In: Communications Biology. 4, 10 p., 579.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Genome-wide analysis of fitness-factors in uropathogenic Escherichia coli during growth in laboratory media and during urinary tract infections

    García, V., Grønnemose, R. B., Torres-Puig, S., Kudirkiene, E., Piantelli, M., Ahmed, S., Andersen, T. E., Møller-Jensen, J., Olsen, John Elmerdahl & Herrero-Fresno, A., 2021, In: Microbial Genomics. 7, 12, 22 p., :000719.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Genomic analysis of antimicrobial resistance and resistance plasmids in salmonella serovars from poultry in Nigeria

    Jibril, A. H., Okeke, I. N., Dalsgaard, Anders, Menéndez, V. G. & Olsen, John Elmerdahl, 2021, In: Antibiotics. 10, 2, p. 1-22 22 p., 99.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    Heat inactivation of foot-and-mouth disease virus, swine vesicular disease virus and classical swine fever virus when air-dried on plastic and glass surfaces

    Kristensen, Thea, Belsham, Graham John & Tjørnehøj, K., 2021, In: Biosafety and Health. 3, 4, p. 217-223

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Histological examination of testes and epididymides from boars naturally infected with porcine reproductive and respiratory syndrome virus (PRRSV)

    Blirup-Plum, Sophie Amalie, Larsen, Lars, Jensen, Henrik Elvang, Kristensen, C. S. & Kvisgaard, L. K., 2021.

    Research output: Contribution to conference › Conference abstract for conference › Communication

  32. Published

    Horsing around: Escherichia coli ST1250 of equine origin harboring epidemic IncHI1/ST9 plasmid with blaCTX-M-1and an operon for short-chain fructooligosaccharide metabolism

    Valcek, A., Sismova, P., Nesporova, K., Overballe-Petersen, S., Bitar, I., Jamborova, I., Kant, A., Hrabak, J., Wagenaar, J. A., Madec, J. Y., Damborg, Peter Panduro, Van Duijkeren, E., Ewers, C., Hordijk, J., Hasman, H., Brouwer, M. S. M. & Dolejska, M., 2021, In: Antimicrobial Agents and Chemotherapy. 65, 5, e02556-20.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Identification and characterization of a spreadable IncI1 plasmid harbouring a blaCTX-M-15 gene in an Italian human isolate of Salmonella serovar Napoli

    Petrin, S., Orsini, M., Mastrorilli, E., Longo, A., Cozza, D., Olsen, John Elmerdahl, Ricci, A., Losasso, C. & Barco, L., 2021, In: Plasmid. 114, 102566.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Identification of African swine fever virus transcription within peripheral blood mononuclear cells of acutely infected pigs

    Olesen, A. S., Kodama, M., Lohse, L., Accensi, F., Rasmussen, T. B., Lazov, C. M., Limborg, Morten Tønsberg, Gilbert, M Thomas P, Bøtner, A. & Belsham, Graham John, 2021, In: Viruses. 13, 11, 2333.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Immunological and bacteriological shifts associated with a flagellin-hyperproducing Salmonella Enteritidis mutant in chickens

    de Oliveira Barbosa, F., de Freitas Neto, O. C., Rodrigues Alves, L. B., Benevides, V. P., de Souza, A. I. S., da Silva Rubio, M., de Almeida, A. M., Saraiva, M. M., de Oliveira, C. J. B., Olsen, John Elmerdahl & Junior, A. B., 2021, In: Brazilian Journal of Microbiology. 52, p. 419–429

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Impact of Yeast Endometritis on Fertility in the Mare

    Nielsen, J. M., Fog, P. & Bojesen, Anders Miki, 2021, In: Journal of Equine Veterinary Science. 99, 103409.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Impacts of quarterly sow mass vaccination with a porcine reproductive and respiratory syndrome virus type 1 (Prrsv-1) modified live vaccine in two herds

    Pedersen, K., Kristensen, C. S., Kvisgaard, L. K. & Larsen, Lars, 2021, In: Vaccines. 9, 10, 1057.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    In silico prediction and prioritization of novel selective antimicrobial drug targets in escherichia coli

    Svanberg Frisinger, Frida, Jana, B., Donadio, S. & Guardabassi, Luca, 2021, In: Antibiotics. 10, 6, 632.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Infection, recovery and re-infection of farmed mink with SARS-CoV-2

    Rasmussen, T. B., Fonager, J., Jørgensen, C. S., Lassaunière, R., Hammer, Anne Sofie Vedsted, Quaade, Michelle Lauge, Boklund, Anette, Lohse, L., Strandbygaard, B., Rasmussen, M., Michaelsen, T. Y., Mortensen, S., Fomsgaard, A., Belsham, Graham John & Bøtner, A., 2021, In: PLOS Pathogens. 17, 11, e1010068.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    Kan vi få mere ud af databaser på fjerkræområdet?

    Lund, Vibe Pedersen, Nielsen, Liza Rosenbaum, Thoefner, Ida & Christensen, Jens Peter, 2021, In: Dansk Erhvervsfjerkrae. 2021, Juni, p. 14-15 2 p.

    Research output: Contribution to journal › Journal article › Communication

  41. Published

    Keel bone fractures are more prevalent in White Leghorn hens than in Red Jungle fowl hens—A pilot study

    Kittelsen, K. E., Gretarsson, P., Jensen, P., Christensen, Jens Peter, Toftaker, I., Moe, R. O. & Vasdal, G., 2021, In: PLoS ONE. 16, 7, e0255234.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Keel bone fractures in Danish laying hens: Prevalence and risk factors

    Thoefner, Ida , Dahl, J. & Christensen, Jens Peter, 2021, In: PLoS ONE. 16, 8, 23 p., e0256105.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Latent Uterine Bacterial Infections

    Petersen, M. R. & Bojesen, Anders Miki, 2021, Equine Reproductive Procedures. 2 ed. Wiley, p. 141-142 2 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  44. Published

    Methicillin-resistant and methicillin-susceptible staphylococcus from vervet monkeys (Chlorocebus sabaeus) in saint kitts

    Hoefer, A., Boyen, F., Beierschmitt, A., Moodley, Arshnee, Roberts, M. C. & Butaye, P., 2021, In: Antibiotics. 10, 3, 290.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Molecular characterization of highly pathogenic avian influenza viruses h5n6 detected in denmark in 2018–2019

    Liang, Yuan, Krog, J. S., Ryt-Hansen, Pia, Pedersen, A. G., Kvisgaard, L. K., Holm, E., Nielsen, P. D., Hammer, Anne Sofie Vedsted, Madsen, Jesper Johannes, Thorup, Kasper, Larsen, Lars & Hjulsager, C. K., 2021, In: Viruses. 13, 6, 1052.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    Molecular identification of members of the family pasteurellaceae from the oral cavity of koalas (phascolarctos cinereus) and their relationship with isolates from koala bite wounds in humans

    Chong, C. W. H., Espinosa-Gongora, C., Blackall, P. J., Sinclair, H. A., Bojesen, Anders Miki, Omaleki, L. & Turni, C., 2021, In: Journal of Zoo and Wildlife Medicine. 51, 4, p. 771-779 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    New strategies to prevent and control avian pathogenic Escherichia coli (APEC)

    Christensen, Henrik, Bachmeier, J. & Bisgaard, M., 2021, In: Avian Pathology. 50, 5, p. 370-381

    Research output: Contribution to journal › Review › Research › peer-review

  48. Published

    Novel clade 2.3.4.4b highly pathogenic avian influenza a h5n8 and h5n5 viruses in Denmark, 2020

    Liang, Yuan, Nissen, J. N., Krog, J. S., Breum, S., Trebbien, R., Larsen, Lars & Hjulsager, C. K., 2021, In: Viruses. 13, 5, 886.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Occurrence of major and minor pathogens in calves diagnosed with bovine respiratory disease

    Kudirkiene, E., Aagaard, A. K., Schmidt, L. M. B., Pansri, P., Krogh, K. M. & Olsen, John Elmerdahl, 2021, In: Veterinary Microbiology. 259, 109135.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Overview and evaluation of existing guidelines for rational antimicrobial use in small-animal veterinary practice in europe

    Allerton, F., Prior, C., Bagcigil, A. F., Broens, E., Callens, B., Damborg, Peter Panduro, Dewulf, J., Filippitzi, M. E., Carmo, L. P., Gómez-Raja, J., Harpaz, E., Mateus, A., Nolff, M., Phythian, C. J., Timofte, D., Zendri, F. & Jessen, Lisbeth Rem, 2021, In: Antibiotics. 10, 4, 409.

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    Overvågning af influenza A virus i svin: Slutrapport 2020

    Ryt-Hansen, Pia, Goecke, Nicole Bakkegård, Krog, J. S., Hjulsager, C. K. & Larsen, Lars, 2021, Københavns Universitet. 28 p.

    Research output: Book/Report › Report › Research

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