Jakob Hull Havgaard
Associate Professor
Preclinical Disease Biology
Ridebanevej 9, 1870 Frederiksberg C
- Published
SNP mining porcine ESTs with MAVIANT, a novel tool for SNP evaluation and annotation
Panitz, F., Stengaard, H., Hornshøj, H., Gorodkin, J., Hedegaard, J., Cirera, S., Thomsen, B. S., Madsen, L. B., Høj, A., Vingborg, R., Zahn, B., Wang, X., Wang, X., Wernersson, R., Jørgensen, C. B., Scheibye-Knudsen, K., Arvin, T., Lumholdt, S., Sawera, M., Green, T. & 5 others, , 2007, In: Bioinformatics. 23, 13, p. i387-91 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Using GPU to accelerate the pairwise structural RNA alignment with base pair probabilities
Sundfeld, D., Teodoro, G., Havgaard, Jakob Hull, Gorodkin, Jan & Melo, A. C. M. A., 2020, In: Concurrency Computation. 32, 10, e5468.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
CUDA-Sankoff: Using GPU to Accelerate the Pairwise Structural RNA Alignment
Sundfeld, D., Havgaard, Jakob Hull, Gorodkin, Jan & De Melo, A. C. M. A., 2017, Proceedings: 2017 25th Euromicro International Conference on Parallel, Distributed and Network-Based Processing, PDP 2017. IEEE, p. 295-302 8 p. 7912663Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Foldalign 2.5: multithreaded implementation for pairwise structural RNA alignment
Sundfeld, D., Havgaard, Jakob Hull, de Melo, A. C. M. A. & Gorodkin, Jan, 2016, In: Bioinformatics. 32, 8, p. 1238-1240 3 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Thousands of corresponding human and mouse genomic regions unalignable in primary sequence contain common RNA structure
Torarinsson, E., Sawera, M., Havgaard, Jakob Hull, Fredholm, Merete & Gorodkin, Jan, 2006, In: Genome Research. 16, 7, p. 885-889 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Multiple structural alignment and clustering of RNA sequences: sequence analysis
Torarinsson, E., Havgaard, Jakob Hull & Gorodkin, Jan, 2007, In: Bioinformatics. 23, 8, p. 926-32 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
ID: 4240647
Most downloads
-
2867
downloads
Porcine transcriptome analysis based on 97 non-normalized cDNA libraries and assembly of 1,021,891 expressed sequence tags
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
1257
downloads
Fast pairwise structural RNA alignments by pruning of the dynamical programming matrix
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
879
downloads
Structured RNAs and synteny regions in the pig genome
Research output: Contribution to journal › Journal article › Research › peer-review
Published