Jan Gorodkin

Jan Gorodkin

Professor

Member of:


    Publication year:
    All
    61 - 70 out of 151Page size: 10
    1. 2018
    2. Published

      Translational co-regulation of a ligand and inhibitor by a conserved RNA element

      Zaucker, A., Nagorska, A., Kumari, P., Hecker, N., Wang, Y., Huang, S., Cooper, L., Sivashanmugam, L., VijayKumar, S., Brosens, J., Gorodkin, Jan & Sampath, K., Jan 2018, In: Nucleic Acids Research. 46, 1, p. 104–119

      Research output: Contribution to journal › Journal article › Research › peer-review

    3. 2017
    4. Published

      RIsearch2: suffix array-based large-scale prediction of RNA-RNA interactions and siRNA off-targets

      Alkan, F., Wenzel, Anne, Palasca, Oana, Kerpedjiev, P., Rudebeck, A. F., Stadler, P. F., Hofacker, I. L. & Gorodkin, Jan, 2017, In: Nucleic Acids Research. 45, 8, 13 p., e60.

      Research output: Contribution to journal › Journal article › Research › peer-review

    5. Published

      Associating transcription factors and conserved RNA structures with gene regulation in the human brain

      Hecker, N., Seemann, Ernst Stefan, Silahtaroglu, Asli, Ruzzo, W. L. & Gorodkin, Jan, 2017, In: Scientific Reports. 7, 1, 16 p., 5776.

      Research output: Contribution to journal › Journal article › Research › peer-review

    6. Published

      Assessing the miRNA sponge potential of RUNX1T1 in t(8;21) acute myeloid leukemia

      Junge, A., Zandi, R., Havgaard, Jakob Hull, Gorodkin, Jan & Cowland, J. B., 2017, In: Gene. 615, p. 35-40 6 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    7. Published

      RAIN: RNA-protein Association and Interaction Networks

      Junge, A., Refsgaard, J. C., Garde, C., Pan, X., Santos, A., Alkan, F., Anthon, Christian, von Mering, C., Workman, C. T., Jensen, Lars Juhl & Gorodkin, Jan, 2017, In: Database: The Journal of Biological Databases and Curation. 2017, 9 p., baw167.

      Research output: Contribution to journal › Journal article › Research › peer-review

    8. Published

      Alignment-free comparative genomic screen for structured RNAs using coarse-grained secondary structure dot plots

      Kato, Y., Gorodkin, Jan & Havgaard, Jakob Hull, Dec 2017, In: BMC Genomics. 18, 1, 935.

      Research output: Contribution to journal › Journal article › Research › peer-review

    9. Published

      RNAscClust: Clustering RNA sequences using structure conservation and graph based motifs

      Miladi, M., Junge, A., Costa, F., Seemann, Ernst Stefan, Havgaard, Jakob Hull, Gorodkin, Jan & Backofen, R., 2017, In: Bioinformatics. 33, 14, p. 2089-2096 8 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    10. Published

      The identification and functional annotation of RNA structures conserved in vertebrates

      Seemann, Ernst Stefan, Mirza, A. H., Hansen, C., Bang-Berthelsen, C. H., Garde, C., Christensen-Dalsgaard, M., Torarinsson, E., Yao, Z., Workman, C. T., Pociot, Flemming, Nielsen, Henrik, Tommerup, Niels, Ruzzo, W. L. & Gorodkin, Jan, 2017, In: Genome Research. 27, p. 1371-1383 14 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    11. Published

      CUDA-Sankoff: Using GPU to Accelerate the Pairwise Structural RNA Alignment

      Sundfeld, D., Havgaard, Jakob Hull, Gorodkin, Jan & De Melo, A. C. M. A., 2017, Proceedings: 2017 25th Euromicro International Conference on Parallel, Distributed and Network-Based Processing, PDP 2017. IEEE, p. 295-302 8 p. 7912663

      Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

    12. 2016
    13. Published

      Differential transcriptional responses to Ebola and Marburg virus infection in bat and human cells: [Plus] Corrigendum

      Hölzer, M., Krähling, V., Amman, F., Barth, E., Bernhart, S. H., Carmelo, V. A. O., Collatz, M., Doose, G., Eggenhofer, F., Ewald, J., Fallmann, J., Feldhahn, L. M., Fricke, M., Gebauer, J., Gruber, A. J., Hufsky, F., Indrischek, H., Kanton, S., Linde, J., Mostajo, N. & 19 others, Ochsenreiter, R., Riege, K., Rivarola-Duarte, L., Sahyoun, A. H., Saunders, S. J., Seemann, Ernst Stefan, Tanzer, A., Vogel, B., Wehner, S., Wolfinger, M. T., Backofen, R., Gorodkin, Jan, Grosse, I., Hofacker, I., Hoffmann, S., Kaleta, C., Stadler, P. F., Becker, S. & Marz, M., 7 Oct 2016, In: Scientific Reports. 6, 16 p., 34589.

      Research output: Contribution to journal › Journal article › Research › peer-review

    Previous 1...3 4 5 6 7 8 9 10 ...16 Next

    ID: 4356276