Matt Denwood

Matt Denwood

Professor

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    ORCID: 0000-0001-5212-4273

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    1. Published

      runjags: an R package providing interface utilities, model templates, parallel computing methods and additional distributions for MCMC models in JAGS

      Denwood, Matt, 2016, In: Journal of Statistical Software. 71, 9, p. 1-25 25 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    2. Published

      World Association for the Advancement of Veterinary Parasitology (W.A.A.V.P.) guideline for diagnosing anthelmintic resistance using the faecal egg count reduction test in ruminants, horses and swine

      Kaplan, R. M., Denwood, Matt, Nielsen, M. K., Thamsborg, Stig Milan, Torgerson, P. R., Gilleard, J. S., Dobson, R. J., Vercruysse, J. & Levecke, B., 2023, In: Veterinary Parasitology. 318, 20 p., 109936.

      Research output: Contribution to journal › Review › Research › peer-review

    3. Published

      Vurdering af dyrs transportegnethed

      Herskin, M. S., Dahl-Pedersen, Kirstin, Denwood, Matt, Fogsgaard, K. K., Forkman, Björn, Gaillard, C., Houe, Hans, Lund, Vibe Pedersen, Nielsen, Liza Rosenbaum, Dam Otten, Nina, Thodberg, K. & Thomsen, P. T., 2016, DCA - Nationalt Center for Jordbrug og Fødevarer. 122 p.

      Research output: Book/Report › Report › Communication

    4. Published

      Variation in individual antibody response to Mycoplasma bovis

      Petersen, Mette Bisgaard, Denwood, Matt & Nielsen, Liza Rosenbaum, 2016. 1 p.

      Research output: Contribution to conference › Poster › Research › peer-review

    5. Published

      Using registry data to identify individual dairy cows with abnormal patterns in routinely recorded somatic cell counts

      Henningsen, Maj Beldring, Reimert, Mossa Merhi, Denwood, Matt, Gussmann, Maya Katrin, Kirkeby, Carsten & Nielsen, Søren Saxmose, 21 Feb 2024, In: Journal of Theoretical Biology. 579, p. 1-7 7 p., 111718.

      Research output: Contribution to journal › Journal article › Research › peer-review

    6. Published

      Use of register data to assess animal welfare

      Houe, Hans, Nielsen, Søren Saxmose, Denwood, Matt, Rousing, T., Sørensen, J. T. & Forkman, Björn, Apr 2015, Improving Pig Welfare - what are the ways forward?: International conference on pig welfare. Ministeriet for Fødevarer, Landbrug og Fiskeri, p. 42-45 4 p.

      Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research

    7. Published

      Use of Danish national somatic cell count data to assess the need for dry-off treatment in Holstein dairy cattle

      Henningsen, Maj Beldring, Denwood, Matt, Kirkeby, Carsten & Nielsen, Søren Saxmose, 2023, In: Animals. 13, 15, 13 p., 2523.

      Research output: Contribution to journal › Journal article › Research › peer-review

    8. Published

      Uptake of Diagnostic Tests by Livestock Farmers: A Stochastic Game Theory Approach

      Mohr, S., Beard, R., Nisbet, A. J., Burgess, S. T. G., Reeve, R., Denwood, Matt, Porphyre, T., Zadoks, R. N. & Matthews, L., 2020, In: Frontiers in Veterinary Science. 7, 36.

      Research output: Contribution to journal › Journal article › Research › peer-review

    9. Published

      Treatment of mild to moderate clinical bovine mastitis caused by gram-positive bacteria: A noninferiority randomized trial of local penicillin treatment alone or combined with systemic treatment

      Svennesen, Line, Skarbye, Alice Puk, Farre, M., Astrup, L. B., Halasa, T., Krömker, Volker, Denwood, Matt & Kirkeby, Carsten, 2023, In: Journal of Dairy Science. 106, 8, p. 5696-5714

      Research output: Contribution to journal › Journal article › Research › peer-review

    10. Published

      Transmission of SARS-CoV-2 Omicron VOC subvariants BA.1 and BA.2: Evidence from Danish Households

      Lyngse, Frederik Plesner, Kirkeby, Carsten, Denwood, Matt, Christiansen, L. E., Mølbak, Kåre, Møller, C. H., Skov, R. L., Krause, Tyra Grove, Rasmussen, M., Sieber, R. N., Johannesen, T. B., Lillebaek, Troels, Fonager, J., Fomsgaard, A., Møller, F. T., Stegger, M., Overvad, M., Spiess, K. & Mortensen, Laust Hvas, 30 Jan 2022, 2 p.

      Research output: Other contribution › Research

    11. Published

      To what extent do experts agree? A study of perceived validity of animal welfare indicators

      Sandøe, Peter, Forkman, Björn, Nøhr, R., Denwood, Matt & Lund, Thomas Bøker, Jun 2017, Measuring Animal Welfare and Applying Scientific Advances: Why Is It Still So Difficult?. Wheathampstead, UK: Universities Federation for Animal Welfare, p. 32 1 p.

      Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research

    12. Published

      Tillægsrapport af den 4. april 2020 til ekspertrapport af den 2. april 2020 vedr. matematisk modellering af COVID19 smittespredning og sygehusbelastning ved scenarier for delvis genåbning af Danmark

      Kirkeby, Carsten, Denwood, Matt & Halasa, T., 2020

      Research output: Other contribution › Commissioned

    13. Published

      Tillægsrapport af den 20. maj 2020 til ekspertrapporten af den 6. maj 2020 og i forlængelse af tillægsrapporten af den 13. maj. Matematisk modellering af COVID-19 smittespredning og sygehusbelastning – beregning af en udvidelse af anden fase af genåbningen af Danmark

      Kirkeby, Carsten, Denwood, Matt, Halasa, T. & Lyngse, Frederik Plesner, 2020

      Research output: Other contribution › Commissioned

    14. Published

      Tillægsrapport af den 13. maj 2020 til ekspertrapport af 6. maj 2020. Matematisk modellering af COVID-19 smittespredning og sygehusbelastning – beregning af anden fase af genåbningen af Danmark

      Kirkeby, Carsten, Halasa, T., Denwood, Matt & Lyngse, Frederik Plesner, 2020

      Research output: Other contribution › Commissioned

    15. Published

      Tillægsnotat af d. 3. februar til notat af d. 31. januar 2021 om prognoser for smittetal og indlæggelser ved yderligere genåbningsscenarie

      Kirkeby, Carsten, Denwood, Matt & Lyngse, Frederik Plesner, 3 Feb 2021

      Research output: Book/Report › Report › Commissioned

    16. The prevalences of Salmonella Genomic Island 1 variants in human and animal Salmonella Typhimurium DT104 are distinguishable using a Bayesian approach

      Mather, A. E., Denwood, Matt, Haydon, D. T., Matthews, L., Mellor, D. J., Coia, J. E., Brown, D. J. & Reid, S. W. J., 2011, In: PLOS ONE. 6, 11, p. e27220

      Research output: Contribution to journal › Journal article › Research › peer-review

    17. Published

      The epidemic volatility index, a novel early warning tool for identifying new waves in an epidemic

      Kostoulas, P., Meletis, E., Pateras, K., Eusebi, P., Kostoulas, T., Furuya-Kanamori, L., Speybroeck, N., Denwood, Matt, Doi, S. A. R., Althaus, C. L., Kirkeby, Carsten, Rohani, P., Dhand, N. K., Peñalvo, J. L., Thabane, L., BenMiled, S., Sharifi, H. & Walter, S. D., 2021, In: Scientific Reports. 11, 1, 23775.

      Research output: Contribution to journal › Journal article › Research › peer-review

    18. The effectiveness of faecal removal methods of pasture management to control the cyathostomin burden of donkeys.

      Corbett, C. J., Love, S., Moore, A., Burden, F. A., Matthews, J. B., Denwood, M. J. & Denwood, Matt, Jan 2014, In: Parasites & Vectors. 7, 1, p. 48 1 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    19. Published

      The effect of age when group housed and other management factors on playing and non-nutritive sucking behaviour in dairy calves: a cross sectional observational study

      Reipurth, M., Klausen, S. K., Denwood, Matt, Forkman, Björn & Houe, Hans, 2020, In: Acta Veterinaria Scandinavica. 62, 1, 63.

      Research output: Contribution to journal › Journal article › Research › peer-review

    20. Published

      The diversity of antimicrobial resistance is different in Salmonella Typhimurium DT104 from co-located animals and humans

      Mather, A. E., Matthews, L., Mellor, D. J., Reeve, R., Denwood, Matt, Boerlin, P., Reid-Smith, R. J., Brown, D. J., Coia, J. E., Browning, L. M., Haydon, D. T. & Reid, S. W. J., 1 Jan 2012, In: Proceedings of the Royal Society B: Biological Sciences. 279, 1740, p. 2924-2925 2 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    21. Published

      The distribution of the pathogenic nematode Nematodirus battus in lambs is zero-inflated

      Denwood, Matt, Stear, M. J., Matthews, L., Reid, S. W. J., Toft, N. & Innocent, G. T., 2008, In: Parasitology. 135, 10, p. 1225-35 11 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    22. Published

      The convergence epidemic volatility index (cEVI) as an alternative early warning tool for identifying waves in an epidemic

      Pateras, K., Meletis, E., Denwood, Matt, Eusebi, P. & Kostoulas, P., 2023, In: Infectious Disease Modelling. 8, 2, p. 484-490 7 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    23. Published

      The construction of a Danish National Animal Welfare Index.

      Forkman, Björn, Holm, L., Sørensen, J. T., Rousing, T., Kirchner, M., Dam Otten, Nina, Michelsen, Anne Marie, Lund, Vibe Pedersen, Hakansson, Franziska, Denwood, Matt & Houe, Hans, 2016. 1 p.

      Research output: Contribution to conference › Paper › Communication

    24. Published

      The aggregation procedure of welfare measures - a comparison between the Danish Animal Welfare Index and the Welfare Quality System

      Kirchner, M., Forkman, Björn, Denwood, Matt, Nielsen, Søren Saxmose, Dam Otten, Nina, Rousing, T., Sørensen, J. T. & Houe, Hans, 2015. 1 p.

      Research output: Contribution to conference › Conference abstract for conference › Research

    25. Published

      Teknisk gennemgang af modellerne

      Kirkeby, Carsten, Denwood, Matt & Halasa, T., 2020

      Research output: Other contribution › Commissioned

    26. Published

      Særskilt bilag af d. 3. februar til ”Notat om prognoser for smittetal og indlæggelser ved scenarier for genåbning af 0.-4. klasse i grundskolen”

      Kirkeby, Carsten, Denwood, Matt & Lyngse, Frederik Plesner, 3 Feb 2021

      Research output: Book/Report › Report › Commissioned

    27. Published

      Survey Design to Monitor Drug Efficacy for the Control of Soil-Transmitted Helminthiasis and Schistosomiasis

      Coffeng, L. E., Levecke, B., Hattendorf, J., Walker, M. & Denwood, Matt, 2021, In: Clinical infectious diseases : an official publication of the Infectious Diseases Society of America. 72, 3, p. S195-S202

      Research output: Contribution to journal › Journal article › Research › peer-review

    28. Published

      Smittemodeller bygger på videnskab, ikke på blokpolitik

      Kirkeby, Carsten, Denwood, Matt & Petersen, Troels Christian, 2021

      Research output: Other contribution › Net publication - Internet publication › Communication

    29. Published

      Should the contribution of one more lame cow depend on how many other cows on the farm are lame?

      Sandøe, Peter, Lund, Thomas Bøker, Forkman, Björn & Denwood, Matt, 2017, WAFL 2017: Proceedings of the 7th International Conference on the Assessment of Animal Welfare at Farm and Group Level. De Jong, I. C. & Koene, P. (eds.). p. 103 1 p.

      Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research

    30. Published

      Should the contribution of one additional lame cow depend on how many other cows on the farm are lame?

      Sandøe, Peter, Forkman, Björn, Hakansson, Franziska, Andreasen, S. N., Nøhr, R., Denwood, Matt & Lund, Thomas Bøker, Dec 2017, In: Animals. 7, 12, 13 p., 96.

      Research output: Contribution to journal › Journal article › Research › peer-review

    31. Published

      Seroprevalence of Toxoplasma gondii infection in sows and finishers from conventional and organic herds in Denmark: implications for potential future serological surveillance

      Olsen, Abbey , Sandberg, M., Houe, Hans, Nielsen, H. V., Denwood, Matt, Jensen, T. B. & Alban, L., 2020, In: Preventive Veterinary Medicine. 185, 10 p., 105149.

      Research output: Contribution to journal › Journal article › Research › peer-review

    32. Published

      Selection of meat inspection data for animal welfare index

      Nielsen, Søren Saxmose, Denwood, Matt & Houe, Hans, 2017, Proceedings of the 7th international conference of the assessment of animal welfare at farm and group level. Wageningen Academic Publishers, p. 136 1 p.

      Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research › peer-review

    33. Published

      Selection of Meat Inspection Data for an Animal Welfare Index in Cattle and Pigs in Denmark

      Nielsen, Søren Saxmose, Denwood, Matt, Forkman, Björn & Houe, Hans, 6 Dec 2017, In: Animals - Open Access Journal. 7, 2, 20 p., 94.

      Research output: Contribution to journal › Journal article › Research › peer-review

    34. Published

      Scenarier for udviklingen i den engelske virusvariant af SARS-COV-2 (cluster B.1.1.7)

      Kirkeby, Carsten & Denwood, Matt, 2 Jan 2021, 3 p.

      Research output: Book/Report › Report › Commissioned

    35. Published

      Risk factors associated with skin and vulva lesions in Danish loose-housed gestating sows and gilts

      Lund, Vibe Pedersen, Michelsen, Anne Marie, Hakansson, Franziska, Kirchner, M., Dam Otten, Nina, Denwood, Matt & Forkman, Björn, 2017, Proceedings of the 7th International Conference on the Assessment of Animal Welfare at Farm and Group Level. Wageningen Academic Publishers, p. 139 1 p.

      Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research › peer-review

    36. Published

      Risk factors Associated with skin and vulva lesions in loose-housed gestating sows and gilts in Denmark

      Lund, Vibe Pedersen, Michelsen, Anne Marie, Hakansson, Franziska, Kirchner, M., Dam Otten, Nina, Denwood, Matt & Forkman, Björn, 2017. 1 p.

      Research output: Contribution to conference › Poster › Research › peer-review

    37. Published

      Random effect selection in generalised linear models: a practical application to slaughterhouse surveillance data in Denmark

      Denwood, Matt, Houe, Hans, Forkman, Björn & Nielsen, Søren Saxmose, 26 Mar 2015. 11 p.

      Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

    38. Quantifying the sources of variability in equine faecal egg counts: implications for improving the utility of the method

      Denwood, Matt, Love, S., Innocent, G. T., Matthews, L., McKendrick, I. J., Hillary, N., Smith, A. & Reid, S. W. J., 13 Aug 2012, In: Veterinary Parasitology. 188, 1-2, p. 120-6 7 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    39. Published

      Quantifying the impact of infectious diseases on animal welfare

      Dam Otten, Nina, Agger, Jens Frederik Gramstrup, Denwood, Matt, Nielsen, Søren Saxmose, Nielsen, Liza Rosenbaum, Forkman, Björn & Houe, Hans, 2021, Proceedings of the 8th International Conference on the Assessment of Animal Welfare at Farm and Group level. Wageningen Academic Publishers, p. 132

      Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research › peer-review

    40. Published

      Quantifying human toxoplasmosis risk from pork consumption in Denmark : A conceptual framework for tissue cyst-based analysis

      Olsen, Abbey , Swart, A., Pires, S. M., Fagt, S., Møgelmose, V., Houe, Hans, Denwood, Matt, Nielsen, H. V. & Alban, L. M., 2024, Vergne, T. and Robinson, P.A. (eds). Proceedings of the Society for Veterinary Epidemiology and Preventive Medicine annual meeting held in Uppsala, Sweden, SVEPM.

      Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research

    41. Published

      Prediction Models in Veterinary and Human Epidemiology: Our Experience With Modeling Sars-CoV-2 Spread

      Halasa, T., Græsbøll, K., Denwood, Matt, Christensen, L. E. & Kirkeby, Carsten, 2020, In: Frontiers in Veterinary Science. 7, 513.

      Research output: Contribution to journal › Journal article › Research › peer-review

    42. Published

      Practical and effective diagnosis of animal anthrax in endemic low-resource settings

      Aminu, O. R., Lembo, T., Zadoks, R. N., Biek, R., Lewis, S., Kiwelu, I., Mmbaga, B. T., Mshanga, D., Shirima, G., Denwood, Matt & Forde, T. L., 2020, In: P L o S Neglected Tropical Diseases. 14, 9, 17 p., e0008655.

      Research output: Contribution to journal › Journal article › Research › peer-review

    43. Published

      Pen-level risk factors associated with tail lesions in Danish weaner pigs: a crosssectional study

      Hakansson, Franziska, Michelsen, Anne Marie, Lund, Vibe Pedersen, Kirchner, M., Dam Otten, Nina, Denwood, Matt & Forkman, Björn, Aug 2018, Proceedings of the 52nd Congress of the International Society of Applied Ethology. p. 211 1 p.

      Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research › peer-review

    44. Published

      Patterns of Fasciola hepatica infection in Danish dairy cattle: implications for on-farm control of the parasite based on different diagnostic methods

      Takeuchi-Storm, N., Denwood, Matt, Petersen, H. H., Enemark, H. L., Stensgaard, Anna-Sofie, Sengupta, Mita Eva, Beesley, N. J., Hodgkinson, J., Williams, D. & Thamsborg, Stig Milan, 2018, In: Parasites & Vectors. 11, 18 p., 674.

      Research output: Contribution to journal › Journal article › Research › peer-review

    45. Published

      Pathway of oxfendazole from the host into the worm: Trichuris suis in pigs

      Hansen, Tina Vicky Alstrup, Williams, Andrew Richard, Denwood, Matt, Nejsum, P., Thamsborg, Stig Milan & Friis, C., 2017, In: International Journal for Parasitology: Drugs and Drug Resistance. 7, 3, p. 416-424 9 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    46. Published

      PREPAREDNESS FOR POTENTIAL FUTURE SEROLOGICAL SURVEILLANCE OF TOXOPLASMA GONDII IN THE DANISH PIG POPULATION: A REVIEW OF LATEST EPIDEMIOLOGICAL STUDIES FROM DENMARK

      Olsen, Abbey , Houe, Hans, Nielsen, H. V., Denwood, Matt, Sandberg, M., Pires, S. M. & Alban, L. M., 2022, p. 173-176.

      Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

    47. Published

      Ny testmetode kan redde danske malkekøer

      Petersen, Mette Bisgaard, Nielsen, Liza Rosenbaum & Denwood, Matt, Jun 2018, In: videnskab.dk. p. 1

      Research output: Contribution to journal › Journal article › Communication

    48. Published

      Notat om prognoser for smittetal og indlæggelser ved scenarier for genåbning af 0.-4. klasse i grundskolen

      Kirkeby, Carsten, Denwood, Matt & Lyngse, Frederik Plesner, 1 Feb 2021

      Research output: Book/Report › Report › Commissioned

    49. Published

      Notat om effekten af nedlukning frem til jul, den 6. december 2020

      Kirkeby, Carsten & Denwood, Matt, 6 Dec 2021

      Research output: Book/Report › Report › Commissioned

    50. Published

      Modeling the Risk of Human Toxoplasmosis in the Danish Population From Ingestion of Tissue Cysts Present in Pork Products

      Olsen, Abbey , Swart, A., Pires, S. M., Fagt, S., Houe, Hans, Denwood, Matt, Møgelmose, V., Nielsen, H. V. & Alban, L. M., 2023, 14th International Symposium on the Epidemiology and Control of Biological, Chemical and Physical Hazards in Pigs and Pork: Proceedings. Iowa State University Digital Press, 4 p.

      Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research

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