Food Safety and Zoonoses

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  1. Published

    Dietary Risk Assessment Due to the Consumption of Polycyclic Aromatic Hydrocarbon in Two Commonly Consumed Street Vended Foods

    Ankar-Brewoo, G. M., Darko, G., Abaidoo, R. C., Dalsgaard, Anders, Johnson, P. N., Ellis, W. O. & Brimer, L., 2022, In: Polycyclic Aromatic Compounds. 42, 5, p. 2151-2161

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Published

    Dietary exposure to aflatoxin B-1, ochratoxin A and fuminisins of adults in Lao Cai province, Viet Nam: A total dietary study approach

    Bui, H. M., Le Danh Tuyen, Do Huu Tuan, Brimer, L. & Dalsgaard, Anders, Dec 2016, In: Food and Chemical Toxicology. 98, Part B, p. 127-133

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Differences in code terminology and frequency of findings in meat inspection of finishing pigs in seven European countries

    Alban, L., Vieira-Pinto, M., Meemken, D., Maurer, P., Ghidini, S., Santos, S., Laguna, J. G., Laukkanen-Ninios, R., Alvseike, O. & Langkabel, N., 2022, In: Food Control. 132, 108394.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Diseases and treatment reported by shrimp and tilapia farmers in Guangdong Province, China

    Li, K., Liu, L., Clausen, J. H. & Dalsgaard, Anders, 2013.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  5. Published

    Dissemination and characteristics of a novel plasmid-encoded carbapenem-hydrolyzing class D β-lactamase, OXA-436, found in isolates from four patients at six different hospitals in Denmark

    Samuelsen, Ø., Hansen, F., Aasnæs, B., Hasman, H., Lund, B. A., Leiros, H. K. S., Lilje, B., Janice, J., Jakobsen, L., Littauer, P., Søes, L. M., Holzknecht, Barbara Juliane, Andersen, Leif Percival, Stegger, M., Andersen, P. S. & Hammerum, A. M., Jan 2018, In: Antimicrobial Agents and Chemotherapy. 62, 1, 13 p., e01260-17.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Distribution and ecology of the generalist lactic acid bacterium Carnobacterium maltaromaticum in different freshwater habitats: Metabolic and antagonistic abilities

    Tang, Taya, Martinenghi, Laura Daniela, Hounmanou, Yaovi Mahuton Gildas & Leisner, Jørgen, 2023, In: Environmental Microbiology. 25, 12, p. 3556-3576 21 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Distribution of salmonella serovars in humans, foods, farm animals and environment, companion and wildlife animals in Singapore

    Aung, K. T., Khor, W. C., Octavia, S., Ye, A., Leo, J., Chan, P. P., Lim, G., Wong, W. K., Tan, B. Z. Y., Schlundt, J., Dalsgaard, Anders, Ng, L. C. & Lin, Y. N., 2020, In: International Journal of Environmental Research and Public Health. 17, 16, p. 1-13 13 p., 5774.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Diverse bacteriophages for biocontrol of ESBL- and AmpC-β-lactamase-producing E. coli

    Vitt, Amira Ruslanovna, Sørensen, Anders Nørgaard, Bojer, Martin Saxtorph, Bortolaia, V., Sørensen, Martine Camilla Holst & Brøndsted, Lone, 2024, In: iScience. 27, 2, 21 p., 108826.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Diversity and population overlap between avian and human Escherichia coli belonging to sequence type 95

    Jørgensen, S. L., Stegger, M., Kudirkiene, E., Lilje, B., Poulsen, Louise Ladefoged, Ronco, T., Dos Santos, T. P., Kiil, K., Bisgaard, M., Pedersen, K., Nolan, L. K., Price, L. B., Olsen, Rikke Heidemann, Andersen, P. S. & Christensen, Henrik, 2019, In: mSphere. 4, 1, 12 p., e00333-18.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Diversity of Blastocystis subtypes in dogs in different geographical settings

    Wang, W., Cuttell, L., Bielefeldt-Ohmann, H., Inpankaew, T., Owen, H. & Traub, R. J., 2013, In: Parasites & Vectors. 6, p. 1-5 5 p., 215.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Does Virulence Assessment of Vibrio anguillarum Using Sea Bass (Dicentrarchus labrax) Larvae Correspond with Genotypic and Phenotypic Characterization?

    Frans, I., Dierckens, K., Crauwels, S., Van Assche, A., Leisner, Jørgen, Larsen, M. H., Michiels, C. W., Willems, K. A., Lievens, B., Bossier, P. & Rediers, H., 2013, In: P L o S One. 8, 8, p. 1-9 9 p., e70477.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Domestic animals as reservoirs of zoonotic hookwork and Giardia duodenalis in a rural village, Cambodia

    Inpankaew, T., 2014, Department of Veterinary Disease Biology, Faculty of Health and Medical Sciences, University of Copenhagen. 179 p.

    Research output: Book/Report › Ph.D. thesis › Research

  13. Published

    Dose dependent induction of hypocoagulability and leukocyte interaction by aggregating Methicillin Resistant Staphylococcus aureus (MRSA) in canine whole blood in vitro

    Krogh, Anne Kirstine Havnsøe, Haaber, J. K., Bochsen, L., Ingmer, Hanne & Kristensen, Annemarie T., 7 Sep 2017.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  14. Published

    DpiA binding to the replication origin of Escherichia coli plasmids and chromosomes destabilizes plasmid inheritance and induces the bacterial SOS response

    Miller, C., Ingmer, Hanne, Thomsen, Line Elnif, Skarstad, K. & Cohen, S. N., 1 Oct 2003, In: Journal of Bacteriology. 185, 20, p. 6025-6031 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Draft genome sequences of three Carnobacterium maltaromaticum isolates from two low pH bogs in Denmark

    Tang, Taya & Leisner, Jørgen, 2024, In: Microbiology resource announcements. 13, 1, 4 p., e00969-23.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Drivers, opportunities, and challenges of the European risk-based meat safety assurance system

    Blagojevic, B., Nesbakken, T., Alvseike, O., Vågsholm, I., Antic, D., Johler, S., Houf, K., Meemken, D., Nastasijevic, I., Vieira Pinto, M., Antunovic, B., Georgiev, M. & Alban, L., 2021, In: Food Control. 124, 12 p., 107870.

    Research output: Contribution to journal › Review › Research › peer-review

  17. Published

    ECOPHAGE: Combating Antimicrobial Resistance Using Bacteriophages for Eco-Sustainable Agriculture and Food Systems

    García, P., Tabla, R., Anany, H., Bastias, R., Brøndsted, Lone, Casado, S., Cifuentes, P., Deaton, J., Denes, T. G., Islam, M. A., Lavigne, R., Moreno-Switt, A. I., Nakayama, N., Muñoz Madero, C., Sulakvelidze, A., Svircev, A. M., Wagemans, J., Biosca, E. G. & Rivera, D., 2023, In: Viruses. 15, 11, 18 p., 2224.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    ESBL and AmpC β-Lactamase Encoding Genes in E. coli From Pig and Pig Farm Workers in Vietnam and Their Association With Mobile Genetic Elements

    Hounmanou, Yaovi Mahuton Gildas, Bortolaia, V., Dang, S. T. T., Truong, D., Olsen, John Elmerdahl & Dalsgaard, Anders, 2021, In: Frontiers in Microbiology. 12, 14 p., 629139.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Editorial: Bridging Science and Policy for Surveillance, Economics and Social Sciences: ICAHS and ISESSAH 2020

    Alban, L., Sauter-Louis, C., Brookes, V. J., Bartels, C. J. M., Vosough Ahmadi, B., Rushton, J. & Dürr, S., 2021, In: Frontiers in Veterinary Science. 8, 790248.

    Research output: Contribution to journal › Editorial › Research › peer-review

  20. Published

    Effect of cefotaxime on conjugation of IncN and IncI1 plasmids encoding beta-lactamases: The 9th International Symposium on Antimicrobials Agents and Resistance (ISAAR 2013). 13-15 march 2013. Kuala Lumpur, Malaysia

    Minoia, M., Bortolaia, V. & Guardabassi, Luca, 2013.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  21. Published

    Effect of cephalosporins on conjugation of IncI1 plasmids encoding CMY-2 beta-lactamases: The 53rd Interscience Conference on Antimicrobial Agents and Chemotherapy (ICAAC 2013). 10-13 September 2013. Denver, Colorado, USA

    Minoia, M., Bortolaia, V., Villa, L., Carattoli, A. & Guardabassi, Luca, 2013.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  22. Published

    Effect of clove (Syzygium aromaticum) and seaweed (Kappaphycus alvarezii) water extracts pretreatment on lipid oxidation in sun-dried sardines (Rastrineobola argentea) from Lake Victoria, Tanzania

    Chaula, D., Laswai, H., Chove, B., Dalsgaard, Anders, Mdegela, R., Jacobsen, C. & Hyldig, G., 2019, In: Food Science and Nutrition. 7, 4, p. 1406-1416 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Effect of co-inhabiting coagulase negative staphylococci on S. Aureus agr quorum sensing, host factor binding, and biofilm formation

    Peng, P., Baldry, M., Gless, B. H., Bojer, Martin Saxtorph, Espinosa-Gongora, C., Baig, S. J., Andersen, P. S., Olsen, Christian Adam & Ingmer, Hanne, 2019, In: Frontiers in Microbiology. 10, SEP, 14 p., 2212.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Effect of dietary tall oil fatty acids and hydrolysed yeast in SNP2-positive and SNP2-negative piglets challenged with F4 enterotoxigenic Escherichia coli

    Middelkoop, A., Kettunen, H., Guan, X., Vuorenmaa, J., Tichelaar, R., Gambino, Michela, Rydal, Martin Peter & Molist, F., 2024, In: Scientific Reports. 14, 12 p., 2060.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Effect of pond water depth on snail populations and fish-borne zoonotic trematode transmission in juvenile giant gourami (Osphronemus goramy) aquaculture nurseries

    Thien, P. C., Madsen, Henry, Nga, H. T. N., Dalsgaard, Anders & Murrell, K. D., 21 Jul 2015, In: Parasitology International. 64, 6, p. 522-526 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Effect of vaccination on household transmission of SARS-CoV-2 Delta variant of concern

    Lyngse, Frederik Plesner, Mølbak, Kåre, Denwood, Matt, Christiansen, L. E., Møller, C. H., Rasmussen, M., Cohen, A. S., Stegger, M., Fonager, J., Sieber, R. N., Ellegaard, K. M., Nielsen, C. & Kirkeby, Carsten, 2022, In: Nature Communications. 13, 1, 3764.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Effects of chronic sub-lethal oxidative stress on biofilm formation by Azotobacter vinelandii

    Villa, F., Remelli, W., Forlani, F., Gambino, Michela, Landini, P. & Cappitelli, F., 2012, In: Biofouling.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Effects of grade, smiley, and text on Danish and Finnish consumers’ perceptions of food safety inspection reports

    Vainio, A., Ollila, S., Sørensen, T. A., Kaskela, J., Finell, E., Leisner, Jørgen & Lundén, J., 2023, In: Food Control. 144, 109382.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Effects of Listeria monocytogenes EGD-e and Salmonella enterica ser. Typhimurium LT2 chitinases on intracellular survival in Dictyostelium discoideum and mammalian cell lines

    Frederiksen, R. F. & Leisner, Jørgen, May 2015, In: F E M S Microbiology Letters. 362, 10, 7 p., fnv067.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    Electronic reporting of diagnostic laboratory test results from all healthcare sectors is a cornerstone of national preparedness and control of COVID-19 in Denmark

    Schønning, Kristian, Dessau, R. B., Jensen, T. G., Thorsen, N. M., Wiuff, C., Nielsen, L., Gubbels, S., Denwood, Matt, Thygesen, U. H., Christensen, L. E., Møller, C. H., Møller, J. K., Ellermann-Eriksen, S., Østergaard, C., Lam, J. U. H., Abushalleeh, N., Meaidi, M., Olsen, S., Mølbak, Kåre & Voldstedlund, M., 2021, In: APMIS. 129, 7, p. 438-451

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Elimination of enrofloxacin in striped catfish (Pangasianodon hypophthalmus) following on-farm treatment

    Phu, T. M., Douny, C., Scippo, M., De Pauw, E., Nguyen, Q. T., Huong, D. T. T., Vinh, H. P., Nguyen Thanh, P. & Dalsgaard, Anders, 1 Mar 2015, In: Aquaculture. 438, p. 1-5 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Engineering of Salmonella Phages into Novel Antimicrobial Tailocins

    Woudstra, Cedric Folkert Julien, Sørensen, Anders Nørgaard & Brøndsted, Lone, 2023, In: Cells. 12, 22, 15 p., 2637.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Engineering of receptor-binding proteins in bacteriophages and phage tail-like bacteriocins

    Dams, D., Brøndsted, Lone, Drulis-Kawa, Z. & Briers, Y., 2019, In: Biochemical Society Transactions. 47, 1, p. 449-460 12 p.

    Research output: Contribution to journal › Review › Research › peer-review

  34. Published

    Enterococcus and Streptococcus spp. associated with chronic and self-medicated urinary tract infections in Vietnam

    Poulsen, Louise Ladefoged, Bisgaard, M., Son, N. T., Trung, N. V., An, H. M. & Dalsgaard, Anders, 2013, In: B M C Infectious Diseases. 12, 7 p., 320.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Environmental contamination and transmission of Ascaris suum in Danish organic pig farms

    Katakam, K. K., Thamsborg, Stig Milan, Dalsgaard, Anders, Kyvsgaard, N. C. & Mejer, Helena, 9 Feb 2016, In: Parasites & Vectors. 9, 80.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Epidemiology of motile Salmonella infections in poultry in Bangladesh and its role in human non-typhoidal salmonellosis

    Barua, H., 2013, Department of Veterinary Disease Biology, Faculty of Health and Medical Sciences, University of Copenhagen. 148 p.

    Research output: Book/Report › Ph.D. thesis › Research

  37. Published

    Er en bakteriologisk undersøgelse af slagtekrop og organer brugbar i forbindelse med kødkontrol?

    Alban, L. M., Kogka, E., Larsen, M. H., Petersen, J. V., Vester, C. H. & Poulsen, M. K., 2020, In: Dansk Veterinaertidsskrift. 2020, 08, p. 22-28

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Erratum: Comparative studies on [Pasteurella] testudinis and [P.] testudinis-like bacteria and proposal of Chelonobacter oris gen. nov., sp. nov. as a new member of the family Pasteurellaceae (International Journal of Systematic and Evolutionary Microbiology (2009) vol. 59 (1583-1588) 10.1099/ijs.0.007203-0)

    Gregersen, R. H., Neubauer, C., Christensen, Henrik, Bojesen, Anders Miki, Hess, M. & Bisgaard, M., 2009, In: International Journal of Systematic and Evolutionary Microbiology. 59, 10, p. 2646 1 p.

    Research output: Contribution to journal › Comment/debate › Research › peer-review

  39. Published

    Estimating the impact of low temperature on African swine fever virus transmission through contaminated environments

    Gao, Y., Boklund, Anette, Nielsen, L. H., Alban, L. & de Jong, M. C. M., 2023, In: Preventive Veterinary Medicine. 219, 105991.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    Estimating the true seroprevalence of Toxoplasma gondii in Danish pigs

    Olsen, Abbey , Sandberg, M., Houe, Hans, Nielsen, H. V., Denwood, Matt & Alban, L. M., 2022, 16th International Symposium of Veterinary Epidemiology and Economics: Connecting Animals, People, and their shared environments - Abstract book. p. 453 1 p. 36

    Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research › peer-review

  41. Published

    European all-cause excess and influenza-attributable mortality in the 2017/18 season: should the burden of influenza B be reconsidered?

    Nielsen, J., Vestergaard, L. S., Richter, L., Schmid, D., Bustos, N., Asikainen, T., Trebbien, R., Denissov, G., Innos, K., Virtanen, M. J., Fouillet, A., Lytras, T., Gkolfinopoulou, K., Heiden, M. A. D., Grabenhenrich, L., Uphoff, H., Paldy, A., Bobvos, J., Domegan, L., O'Donnell, J. & 26 others, Scortichini, M., de Martino, A., Mossong, J., England, K., Melillo, J., van Asten, L., de Lange, M. M., Tønnessen, R., White, R. A., da Silva, S. P., Rodrigues, A. P., Larrauri, A., Mazagatos, C., Farah, A., Carnahan, A. D., Junker, C., Sinnathamby, M., Pebody, R. G., Andrews, N., Reynolds, A., McMenamin, J., Brown, C. S., Adlhoch, C., Penttinen, P., Mølbak, Kåre & Krause, T. G., 2019, In: Clinical Microbiology and Infection. 25, 10, p. 1266-1276 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Evaluating integrated surveillance of antimicrobial resistance: experiences from use of three evaluation tools

    Nielsen, Liza Rosenbaum, Alban, L., Ellis-Iversen, J., Mintiens, K. & Sandberg, M., 2020, In: Clinical Microbiology and Infection. 26, 12, p. 1606-1611

    Research output: Contribution to journal › Review › Research › peer-review

  43. Published

    Evaluating the OH-EpiCap tool using the Danish integrated surveillance program for AMU and AMR as a case study

    Moura, P., Høg, B. B., Alban, L., Sönksen, U. W., Ribeiro Duarte, A. S. & Sandberg, M., 2023, In: Frontiers in Public Health. 11, 8 p., 1127701.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Evaluation of a Salmonella‐specific DNA probe by colony hybridization using non‐isotopic and isotopic labeling

    AABO, S., THOMAS, A., HALL, M. L. M., SMITH, H. R. & Olsen, John Elmerdahl, Jul 1992, In: APMIS. 100, 7-12, p. 623-628 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Evaluation of antimicrobial products used in tilapia (Oreochromis spp.) and whiteleg shrimp (Litopenaeus vannamei) aquaculture

    Li, K., Liu, L., Zhan, J., Scippo, M. L. & Dalsgaard, Anders, 2019, In: Aquaculture Research. 50, 3, p. 925-933 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    Evaluation of the food safety risk associated with de-boning of Danish sows: Investigations on sows with chronic purulent lesions indicative of prior septicaemia

    Pedersen, T. Ø., Bækbo, A. K., Petersen, J. V., Larsen, M. H. & Alban, L. M., 2017, In: Fleischwirtschaft International. 2017, 2, p. 66-70

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Evaluation of the value of using bovine kidneys as an additional matrix in a bacteriological examination of carcass fitness for human consumption

    Abildgaard, K., Petersen, J. V., Kiel Poulsen, M. & Alban, L., 2023, In: Food Control. 153, 109928.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Evidence for Human Adaptation and Foodborne Transmission of Livestock-Associated Methicillin-Resistant Staphylococcus aureus

    Larsen, J., Stegger, M., Andersen, P. S., Petersen, A., Larsen, A. R., Westh, H., Agersø, M. Y. F., Fetsch, A., Kraushaar, B., Käsbohrer, A., Feβler, A. T., Schwarz, S., Cuny, C., Witte, W., Butaye, P., Denis, O., Haenni, M., Madec, J-Y., Jouy, E., Laurent, F. & 15 others, Battisti, A., Franco, A., Alba, P., Mammina, C., Pantosti, A., Monaco, M., Wagenaar, J. A., de Boer, E., van Duijkeren, E., Heck, M., Domínguez, L., Torres, C., Zarazaga, M., Price, L. B. & Skov, R. L., Nov 2016, In: Clinical Infectious Diseases. 63, 10, p. 1349-1352 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Evolution and Population Dynamics of Clonal Complex 152 Community-Associated Methicillin-Resistant Staphylococcus aureus

    Baig, S., Rhod Larsen, A., Martins Simões, P., Laurent, F., Johannesen, T. B., Lilje, B., Tristan, A., Schaumburg, F., Egyir, B., Cirkovic, I., Nimmo, G. R., Spiliopoulou, I., Blanc, D. S., Mernelius, S., Moen, A. E. F., David, M. Z., Andersen, P. S. & Stegger, M., 2020, In: mSphere. 5, 4, 9 p., e00226-20 .

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Evolution of metabolic divergence in Pseudomonas aeruginosa during long-term infection facilitates a proto-cooperative interspecies interaction

    Michelsen, C. F., Hossein Khademi, S. M., Johansen, Helle Krogh, Ingmer, Hanne, Dorrestein, P. C. & Jelsbak, L., Jun 2016, In: I S M E Journal. 10, 6, p. 1323-1336

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    Evolutionary history of Staphylococcus aureus influences antibiotic resistance evolution

    Fait, A., Andersson, D. I. & Ingmer, Hanne, 2023, In: Current Biology. 33, 16, p. 3389-3397.e5

    Research output: Contribution to journal › Journal article › Research › peer-review

  52. Published

    Excess all-cause mortality during the COVID-19 pandemic in Europe – preliminary pooled estimates from the EuroMOMO network, March to April 2020

    Vestergaard, L. S., Nielsen, J., Richter, L., Schmid, D., Bustos, N., Braeye, T., Denissov, G., Veideman, T., Luomala, O., Möttönen, T., Fouillet, A., Caserio-Schönemann, C., der Heiden, M. A., Uphoff, H., Lytras, T., Gkolfinopoulou, K., Paldy, A., Domegan, L., O’Donnell, J., de’ Donato, F. & 24 others, Noccioli, F., Hoffmann, P., Velez, T., England, K., van Asten, L., White, R. A., Tønnessen, R., da Silva, S. P., Rodrigues, A. P., Larrauri, A., Delgado-Sanz, C., Farah, A., Galanis, I., Junker, C., Perisa, D., Sinnathamby, M., Andrews, N., O’Doherty, M., Marquess, D. F. P., Kennedy, S., Olsen, S. J., Pebody, R., Krause, T. G. & Mølbak, Kåre, 2020, In: Eurosurveillance. 25, 26, 6 p., 2001214.

    Research output: Contribution to journal › Journal article › Research › peer-review

  53. Published

    Excess all-cause mortality in the USA and Europe during the COVID-19 pandemic, 2020 and 2021

    Rossen, L. M., Nørgaard, S. K., Sutton, P. D., Krause, Tyra Grove, Ahmad, F. B., Vestergaard, L. S., Mølbak, Kåre, Anderson, R. N. & Nielsen, J., 2022, In: Scientific Reports. 12, 18559.

    Research output: Contribution to journal › Journal article › Research › peer-review

  54. Published

    Exit tunnel modulation as resistance mechanism of S. aureus erythromycin resistant mutant

    Halfon, Y., Matzov, D., Eyal, Z., Bashan, A., Zimmerman, E., Kjeldgaard, J., Ingmer, Hanne & Yonath, A., 2019, In: Scientific Reports. 9, 1, 8 p., 11460.

    Research output: Contribution to journal › Journal article › Research › peer-review

  55. Published

    Experimental infection with the small intestinal trematode, Haplorchis pumilio, in young dogs

    Nissen, S., Nguyen, L. A. T., Dalsgaard, Anders, Thamsborg, Stig Milan & Johansen, M. V., 2013, In: Veterinary Parasitology. 191, 1-2, p. 138-142 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  56. Published

    Experimental non-alcoholic steatohepatitis in Göttingen Minipigs: Consequences of high fat-fructose-cholesterol diet and diabetes

    Schumacher-Petersen, Camilla, Christoffersen, B. O., Kirk, R. K., Ludvigsen, T. P., Zois, N. E., Pedersen, H. D., Vyberg, M. & Olsen, Lisbeth Høier, 2019, In: Journal of Translational Medicine. 17, 1, 110.

    Research output: Contribution to journal › Journal article › Research › peer-review

  57. Published

    Expert opinion on livestock antimicrobial usage indications and patterns in Denmark, Portugal and Switzerland

    Carmo, L. P., Bouzalas, I., Nielsen, Liza Rosenbaum, Alban, L. M., da Costa, P. M., Müntener, C., Schüpbach-Regula, G., Abreu, Y. & Magouras, I., Nov 2018, p. 1.

    Research output: Contribution to conference › Poster › Research › peer-review

  58. Published

    Exploiting phage receptor binding proteins to enable endolysins to kill Gram-negative bacteria

    Zampara, A., Sørensen, Martine Camilla Holst, Grimon, D., Antenucci, F., Vitt, Amira Ruslanovna, Bortolaia, V., Briers, Y. & Brøndsted, Lone, 2020, In: Scientific Reports. 10, 12 p., 12087.

    Research output: Contribution to journal › Journal article › Research › peer-review

  59. Published

    Exploration of the Diversity of Clustered Regularly Interspaced Short Palindromic Repeats-Cas Systems in Clostridium novyi sensu lato

    Le Gratiet, T., Le Marechal, C., Devaere, M., Chemaly, M. & Woudstra, Cedric Folkert Julien, 2021, In: Frontiers in Microbiology. 12, 17 p., 711413.

    Research output: Contribution to journal › Journal article › Research › peer-review

  60. Published

    Exposure, protection and self-reported health problems among solid waste handlers in a Coastal Peri-urban community in Ghana

    Kretchy, J., Dzodzomenyo, M., Vildekilde, Thilde, Ayi, I., Konradsen, Flemming, Fobil, J. N. & Dalsgaard, Anders, 2015, In: International Journal of Public Health and Epidemiology. 4, 2, p. 121-128 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  61. Published

    F4- and F18-Positive Enterotoxigenic Escherichia coli Isolates from Diarrhea of Postweaning Pigs: Genomic Characterization

    García, V., Gambino, Michela, Pedersen, K., Haugegaard, S., Olsen, John Elmerdahl & Herrero-Fresno, A., 2020, In: Applied and Environmental Microbiology. 86, 23

    Research output: Contribution to journal › Journal article › Research › peer-review

  62. Published

    Faecal contamination and health aspects of processing tomatoes (Solanum lycopersicum) irrigated with wastewater treated by decentralised wastewater treatment technologies

    Forslund, A., Battilani, A., Ensink, J. H. J., Markussen, Bo, Gola, S., Sandei, L., Solimando, D. & Dalsgaard, Anders, 2013, In: Acta Horticulturae. 971, p. 85-92 6 p.

    Research output: Contribution to journal › Conference article › Research › peer-review

  63. Published

    Farmer preference, utilization, and biochemical composition of improved cassava (Manihot esculenta Crantz) varieties in southeastern Africa

    Chiwona-Karltun, L., Nyirenda, D., Mwansa, C. N., Kongor, J. E., Brimer, L., Haggblade, S. & Afoakwa, E. O., 2015, In: Economic Botany. 69, 1, p. 42-56 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  64. Published

    Fate of CMY-2-Encoding Plasmids Introduced into the Human Fecal Microbiota by Exogenous Escherichia coli

    Anjum, M., Madsen, Jonas Stenløkke, Nesme, Joseph, Jana, B., Wiese, M., Jasinskyte, D., Nielsen, Dennis Sandris, Sørensen, Søren Johannes, Dalsgaard, Anders, Moodley, Arshnee, Bortolaia, V. & Guardabassi, Luca, 2019, In: Antimicrobial Agents and Chemotherapy. 63, 5, 13 p., e02528-18.

    Research output: Contribution to journal › Journal article › Research › peer-review

  65. Published

    Fatty Acid Profiles and Lipid Oxidation Status of Sun Dried, Deep Fried, and Smoked Sardine (Rastrineobola argentea) from Lake Victoria, Tanzania

    Chaula, D., Laswai, H., Chove, B., Dalsgaard, Anders, Mdegela, R. & Hyldig, G., 2019, In: Journal of Aquatic Food Product Technology. 28, 2, p. 165-176 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  66. Published

    Fecal Shedding of Multidrug Resistant Escherichia coli Isolates in Dogs Fed with Raw Meat-Based Diets in Brazil

    Ramos, C. P., Kamei, C. Y. I., Viegas, F. M., de Melo Barbieri, J., Cunha, J. L. R., Hounmanou, Yaovi Mahuton Gildas, Coura, F. M., Santana, J. A., Lobato, F. C. F., Bojesen, Anders Miki & Silva, R. O. S., 2022, In: Antibiotics. 11, 4, 534.

    Research output: Contribution to journal › Journal article › Research › peer-review

  67. Published

    Finding New Fundamental Pieces for the Bacterial Cell Division Puzzle

    Frees, Dorte & Ingmer, Hanne, 2022, In: mBio. 13, 4, e0073722.

    Research output: Contribution to journal › Journal article › Research › peer-review

  68. Published

    Fishborne trematodes in cultured Nile tilapia (Oreochromis niloticus) and wild-caught fish from Thailand

    Wiriya, B., Clausen, J. H., Inpankaew, T., Thaenkham, U., Jittapalapong, S., Satapornvanit, K. & Dalsgaard, Anders, 2013, In: Veterinary Parasitology. 198, 1-2, p. 230-234 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  69. Published

    Flagellotropic phages: common yet diverse host interaction strategies

    Gambino, Michela & Sørensen, Martine Camilla Holst, 2024, In: Current Opinion in Microbiology. 78, 7 p., 102451.

    Research output: Contribution to journal › Review › Research › peer-review

  70. Published

    Fluoroquinolone resistance does not facilitate phage Φ13 integration or excision in Staphylococcus aureus

    Leinweber, H., Sieber, R. N., Bojer, Martin Saxtorph, Larsen, J. & Ingmer, Hanne, 2023, In: Access microbiology. 5, 6, 19 p., 000583.v4.

    Research output: Contribution to journal › Journal article › Research › peer-review

  71. Published

    Free-living birds from Caatinga and Atlantic Forest of northeast Brazil as hosts of Enterobacterales, Mycoplasma spp., and Chlamydia psittaci

    Lugarini, C., Silva, L. T. R., de Amorim, M. M. R., de Lima, D. C. V., Santos, S. B., Becker Simoes Saidenberg, André, Raso, T. F., Mota, R. A. & Silva, J. C. R., 2021, In: Ornithology Research. 29, p. 149–159

    Research output: Contribution to journal › Journal article › Research › peer-review

  72. Published

    From Alpha Diversity to Zzz: Interactions among sleep, the brain, and gut microbiota in the first year of life

    Schoch, S. F., Castro-Mejía, J. L., Krych, Lukasz, Leng, B., Kot, Witold, Kohler, M., Huber, R., Rogler, G., Biedermann, L., Walser, J. C., Nielsen, Dennis Sandris & Kurth, S., 2022, In: Progress in Neurobiology. 209, 11 p., 102208.

    Research output: Contribution to journal › Journal article › Research › peer-review

  73. Published

    Full-scale industrial phage trial targeting Salmonella on pork carcasses

    Volpi, M., Gambino, Michela, Kirkeby, K., Elsser-Gravesen, A. & Brøndsted, Lone, 2023, In: Food Microbiology. 112, 104240.

    Research output: Contribution to journal › Journal article › Research › peer-review

  74. Published

    Functional Characterization of Type III-A CRISPR-Cas in a Clinical Human Methicillin-R Staphylococcus aureus Strain

    Yang, L., Mikkelsen, K., Grané, O. L. I., Wang, Z., Tang, Y., Jiao, X., Ingmer, Hanne, Høyland-Kroghsbo, Nina Molin & Li, Q., 2021, In: CRISPR Journal. 4, 5, p. 686-698

    Research output: Contribution to journal › Journal article › Research › peer-review

  75. Published

    Förster Resonance Energy Transfer Assay for Investigating the Reactivity of Thioesters in Biochemistry and Native Chemical Ligation

    Gless, B. H., Schmied, S. H., Bejder, Benjamin Svejdal & Olsen, Christian Adam, 2023, In: JACS Au. 3, 5, p. 1443–1451

    Research output: Contribution to journal › Journal article › Research › peer-review

  76. Published

    Fødevaresikkerhed i udvikling

    Ingmer, Hanne, Larsen, M. H., Leisner, Jørgen, Frees, Dorte, Brøndsted, Lone & Dalsgaard, Anders, 2019, In: Dansk Veterinaertidsskrift. 2019, 7, p. 10-13

    Research output: Contribution to journal › Journal article › Communication

  77. Published

    Fødevaresikkerhed, egenkontrol og kultur: et studie af egenkontrollen og fødevaresikkerhedskulturen på tre mindre kødforarbejdende virksomheder

    Nøhr, R., Larsen, M. H., Nørrung, Birgit & Lassen, J., 2016, Institut for Fødevare- og Ressourceøkonomi, Københavns Universitet. 42 p. (IFRO Rapport; No. 246).

    Research output: Book/Report › Report › Research

  78. Published

    Genes associated to lactose metabolism illustrate the high diversity of Carnobacterium maltaromaticum

    Iskandar, C. F., Cailliez-Grimal, C., Rahman, A., Rondags, E., Remenant, B., Zagorec, M., Leisner, Jørgen, Borges, F. & Revol-Junelles, A., Sep 2016, In: Food Microbiology. 58, p. 79-86

    Research output: Contribution to journal › Journal article › Research › peer-review

  79. Published

    Genetic Comparison of ESBL-Producing Escherichia coli from Workers and Pigs at Vietnamese Pig Farms

    Truong, D. T. Q., Hounmanou, Yaovi Mahuton Gildas, Dang, S. T. T., Olsen, John Elmerdahl, Truong, G. T. H., Tran, N. T., Scheutz, F. & Dalsgaard, Anders, 2021, In: Antibiotics. 10, 10, 1165.

    Research output: Contribution to journal › Journal article › Research › peer-review

  80. Published

    Genetic relationship among avian isolates classified as Pasteurella haemolytica. 'Actinobacillus salpingitidis' or Pasteurella anatis with proposal of Gallibacterium anatis gen. nov., comb. nov. and description of additional genomospecies with Gallibacterium gen. nov

    Christensen, Henrik, Bisgaard, M., Bojesen, Anders Miki, Mutters, R. & Olsen, John Elmerdahl, Jan 2003, In: International Journal of Systematic and Evolutionary Microbiology. 53, 1, p. 275-287 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  81. Published

    Genetic variation in the Staphylococcus aureus 8325 strain lineage revealed by whole-genome sequencing

    Bæk, K. T., Frees, Dorte, Renzoni, A., Barras, C., Rodriguez, N., Manzano, C. & Kelley, W. L., 2013, In: P L o S One. 8, 9, 16 p., e77122.

    Research output: Contribution to journal › Journal article › Research › peer-review

  82. Published

    Genetic variations in pattern recognition receptor loci are associated with anti-TNF response in patients with rheumatoid arthritis

    Sode, J., Vogel, U., Bank, S., Andersen, P. S., Hetland, Merete Lund, Locht, H., Heegaard, N. H. H. & Andersen, V., 6 Oct 2015, In: P L o S One. 10, 10, 13 p., e0139781.

    Research output: Contribution to journal › Journal article › Research › peer-review

  83. Published

    Genetically determined high activities of the TNF-alpha, IL23/IL17, and NFkB pathways were associated with increased risk of ankylosing spondylitis

    Sode, J., Bank, S., Vogel, U., Andersen, P. S., Sørensen, S. B., Bojesen, A. B., Andersen, M. R., Brandslund, I., Dessau, R. B., Hoffmann, H. J., Glintborg, B., Hetland, Merete Lund, Locht, H., Heegaard, N. H. & Andersen, V., 2018, In: BMC Medical Genetics. 19, 16 p., 165.

    Research output: Contribution to journal › Journal article › Research › peer-review

  84. Published

    Genetically determined high activity of IL-12 and IL-18 in ulcerative colitis and TLR5 in Crohns disease were associated with non-response to anti-TNF therapy

    Bank, S., Andersen, P. S., Burisch, J., Pedersen, N., Roug, S., Galsgaard, J., Turino, S. Y., Brodersen, J. B., Rashid, S., Rasmussen, B. K., Avlund, S., Olesen, T. B., Hoffmann, H. J., Nexø, B. A., Sode, J., Vogel, U. & Andersen, V., Jan 2018, In: Pharmacogenomics Journal. 18, 1, p. 87-97 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  85. Published

    Genome Sequences of 16 Escherichia coli Bacteriophages Isolated from Wastewater, Pond Water, Cow Manure, and Bird Feces

    Vitt, Amira Ruslanovna, Ahern, S. J., Gambino, Michela, Sørensen, Martine Camilla Holst & Brøndsted, Lone, 2022, In: Microbiology resource announcements. 11, 10

    Research output: Contribution to journal › Journal article › Research › peer-review

  86. Published

    Genome analysis of Clostridium perfringens isolates from healthy and necrotic enteritis infected chickens and turkeys

    Ronco, T., Stegger, M., Ng, K. L., Lilje, B., Lyhs, U., Andersen, P. S. & Pedersen, K., Jul 2017, In: BMC Research Notes. 10, 1, 6 p., 270.

    Research output: Contribution to journal › Journal article › Research › peer-review

  87. Published

    Genome-Based Analysis of Extended-Spectrum β-Lactamase-Producing Escherichia coli in the Aquatic Environment and Nile Perch (Lates niloticus) of Lake Victoria, Tanzania

    Baniga, Z., Hounmanou, Yaovi Mahuton Gildas, Kudirkiene, E., Kusiluka, L. J. M., Mdegela, R. H. & Dalsgaard, Anders, 2020, In: Frontiers in Microbiology. 11, p. 108 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  88. Published

    Genome-Wide Identification of Antimicrobial Intrinsic Resistance Determinants in Staphylococcus aureus

    Vestergaard, M., Leng, B., Haaber, J., Bojer, Martin Saxtorph, Vegge, C. S. & Ingmer, Hanne, 19 Dec 2016, In: Frontiers in Microbiology. 7, 10 p., 2018.

    Research output: Contribution to journal › Journal article › Research › peer-review

  89. Published

    Genome-wide identification of resveratrol intrinsic resistance determinants in staphylococcus aureus

    Liu, L., Ingmer, Hanne & Vestergaard, M., 2021, In: Antibiotics. 10, 1, p. 1-9 9 p., 82.

    Research output: Contribution to journal › Journal article › Research › peer-review

  90. Published

    Genomic Microevolution of Vibrio cholerae O1, Lake Tanganyika Basin, Africa

    Hounmanou, Yaovi Mahuton Gildas, Njamkepo, E., Rauzier, J., Gallandat, K., Jeandron, A., Kamwiziku, G., Porten, K., Luquero, F., Abedi, A. A., Rumedeka, B. B., Miwanda, B., Michael, M., Okitayemba, P. W., Saidi, J. M., Piarroux, R., Weill, F. X., Dalsgaard, Anders & Quilici, M. L., 2023, In: Emerging Infectious Diseases . 29, 1, p. 149-153 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  91. Published

    Genomic analyses of Staphylococcus aureus clonal complex 45 isolates does not distinguish nasal carriage from bacteraemia

    Roe, C., Stegger, M., Lilje, B., Johannesen, T. B., Ng, K. L., Sieber, R. N., Driebe, E., Engelthaler, D. M. & Andersen, P. S., 2020, In: Microbial Genomics. 6, 8, 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  92. Published

    Genomic analysis of antimicrobial resistance and resistance plasmids in salmonella serovars from poultry in Nigeria

    Jibril, A. H., Okeke, I. N., Dalsgaard, Anders, Menéndez, V. G. & Olsen, John Elmerdahl, 2021, In: Antibiotics. 10, 2, p. 1-22 22 p., 99.

    Research output: Contribution to journal › Journal article › Research › peer-review

  93. Published

    Genomic analysis of sewage from 101 countries reveals global landscape of antimicrobial resistance

    Munk, P., Brinch, C., Møller, F. D., Petersen, T. N., Hendriksen, R. S., Seyfarth, A. M., Kjeldgaard, J. S., Svendsen, C. A., van Bunnik, B., Berglund, F., Bego, A., Power, P., Rees, C., Lambrinidis, D., Neilson, E. H. J., Gibb, K., Coventry, K., Collignon, P., Cassar, S., Allerberger, F. & 31 others, Begum, A., Hossain, Z. Z., Worrell, C., Vandenberg, O., Pieters, I., Victorien, D. T., Gutierrez, A. D. S., Soria, F., Grujić, V. R., Mazalica, N., Rahube, T. O., Tagliati, C. A., Rodrigues, D., Oliveira, G., de Souza, L. C. R., Ivanov, I., Juste, B. I., Oumar, T., Sopheak, T., Vuthy, Y., Ngandijo, A., Nzouankeu, A., Olivier, Z. A. A. J., Yost, C. K., Hansen, L. T., Jensen, P. E., Parimannan, S., Hounmanou, Yaovi Mahuton Gildas, Thomsen, J., Aarestrup, F. M. & Global Sewage Surveillance Consortium, G. S. S. C., 2022, In: Nature Communications. 13, 16 p., 7251.

    Research output: Contribution to journal › Journal article › Research › peer-review

  94. Published

    Genomic analysis of the zoonotic ST73 lineage containing avian and human extraintestinal pathogenic Escherichia coli (ExPEC)

    Becker Simoes Saidenberg, André, van Vliet, A. H. M., Stegger, M., Johannesen, T. B., Semmler, T., Cunha, M., C. de O. Silveira, A., Kuroki Anzai, E., C.A. Scaletsky, I., Dalsgaard, Anders, La Ragione, R. M. & Knöbl, T., 2022, In: Veterinary Microbiology. 267, 109372.

    Research output: Contribution to journal › Journal article › Research › peer-review

  95. Published

    Genomic analysis reveals different mechanisms of fusidic acid resistance in Staphylococcus aureus from Danish atopic dermatitis patients

    Edslev, S. M., Clausen, M. L., Agner, Tove, Stegger, M. & Andersen, P. S., 2018, In: Journal of Antimicrobial Chemotherapy. 73, 4, p. 856-861 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  96. Published

    Genomic and Phenotypic Insights for Toxigenic Clinical Vibrio cholerae O141

    Hounmanou, Yaovi Mahuton Gildas, Sit, B., Fakoya, B., Waldor, M. K. & Dalsgaard, Anders, 2022, In: Emerging Infectious Diseases . 28, 3, p. 617-624 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  97. Published

    Genomic characterization, phylogenetic analysis, and identification of virulence factors in Aerococcus sanguinicola and Aerococcus urinae strains isolated from infection episodes

    Carkaci, D., Højholt, K., Nielsen, X. C., Dargis, R., Rasmussen, Simon, Skovgaard, O., Fuursted, K., Andersen, P. S., Stegger, M. & Christensen, J. J., Nov 2017, In: Microbial Pathogenesis. 112, p. 327-340 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  98. Published

    Genomic insights into Vibrio cholerae O1 responsible for cholera epidemics in Tanzania between 1993 and 2017

    Hounmanou, Yaovi Mahuton Gildas, Leekitcharoenphon, P., Kudirkiene, E., Mdegela, R. H., Hendriksen, R. S., Olsen, John Elmerdahl & Dalsgaard, Anders, 2019, In: PLOS Neglected Tropical Diseases . 13, 12, 14 p., e0007934.

    Research output: Contribution to journal › Journal article › Research › peer-review

  99. Published

    Genomic traits of Aeromonas veronii isolated from slaughtered Danish broilers

    Erickson, Vera Irene, Alfifi, Ahmed Eassa H, Hounmanou, Yaovi Mahuton Gildas, Sana, M. J., Christensen, Jens Peter & Dalsgaard, Anders, 2023, In: Veterinary Microbiology. 283, 109772.

    Research output: Contribution to journal › Journal article › Research › peer-review

  100. Published

    Global responses to oxytetracycline treatment in tetracycline-resistant Escherichia coli

    Møller, T. S. B., Liu, G., Hartman, H. B., Rau, M. H., Mortensen, S., Thamsborg, K., Johansen, A. E., Sommer, M. O. A., Guardabassi, Luca, Poolman, M. G. & Olsen, John Elmerdahl, 2020, In: Scientific Reports. 10, 1, 13 p., 8438.

    Research output: Contribution to journal › Journal article › Research › peer-review

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