Food Safety and Zoonoses

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  1. Published

    Time-lapse Imaging of Bacterial Swarms and the Collective Stress Response

    Bru, J., Siryaporn, A. & Høyland-Kroghsbo, Nina Molin, 2020, In: Journal of visualized experiments : JoVE. 159, e60915.

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Published

    PQS Produced by the Pseudomonas aeruginosa Stress Response Repels Swarms Away from Bacteriophage and Antibiotics

    Bru, J., Rawson, B., Trinh, C., Whiteson, K., Høyland-Kroghsbo, Nina Molin & Siryaporn, A., 1 Dec 2019, In: Journal of Bacteriology. 201, 23, e00383-19.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Aflatoxins and fumonisins in rice and maize staple cereals in Northern Vietnam and dietary exposure in different ethnic groups

    Bui, H. M., Tuyen, L. D., Do, T. T., Madsen, Henry & Dalsgaard, Anders, Dec 2016, In: Food Control. 70, p. 191-200

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Dietary exposure to aflatoxin B-1, ochratoxin A and fuminisins of adults in Lao Cai province, Viet Nam: A total dietary study approach

    Bui, H. M., Le Danh Tuyen, Do Huu Tuan, Brimer, L. & Dalsgaard, Anders, Dec 2016, In: Food and Chemical Toxicology. 98, Part B, p. 127-133

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Phenotypic resistance and the dynamics of bacterial escape from phage control

    Bull, J. J., Vegge, C. S., Schmerer, M., Chaudhry, W. N. & Levin, B. R., 2014, In: PloS one. 9, 4, 10 p., e94690.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Dabigatran and the Risk of Staphylococcus aureus Bacteremia: A Nationwide Cohort Study

    Butt, J. H., Fosbøl, E. L., Verhamme, P., Gerds, Thomas Alexander, Iversen, Kasper, Bundgård, Henning, Bruun, Niels Eske, Larsen, A. R., Petersen, A., Andersen, P. S., Skov, R. L., Gislason, Gunnar Hilmar, Torp-Pedersen, Christian, Køber, Lars Valeur & Olesen, J. B., 2021, In: Clinical infectious diseases : an official publication of the Infectious Diseases Society of America. 73, 3, p. 480-486 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    A Staphylococcus aureus clpX Mutant Used as a Unique Screening Tool to Identify Cell Wall Synthesis Inhibitors that Reverse β-Lactam Resistance in MRSA

    Bæk, K. T., Jensen, C., Farha, M. A., Nielsen, T. K., Paknejadi, E., Mebus, Viktor Hundtofte, Vestergaard, M., Brown, E. D. & Frees, Dorte, 2021, In: Frontiers in Molecular Biosciences. 8, 691569.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Stepwise decrease in daptomycin susceptibility in clinical Staphylococcus aureus isolates associated with an initial mutation in rpoB and a compensatory inactivation of the clpX gene

    Bæk, K. T., Thøgersen, L., Mogensen, R. G., Pedersen, M. M., Thomsen, Line Elnif, Petersen, A., Skov, Søren, Cameron, D. R., Peleg, A. Y. & Frees, Dorte, Nov 2015, In: Antimicrobial Agents and Chemotherapy. 59, 11, p. 6983-6991 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Role of HtrA protease and chaperone activity in stress tolerance and virulence of Campylobacter jejuni

    Bæk, K. T., Vegge, C. S., Skórko-Glonek, J. & Brøndsted, Lone, 2010, Abstracts 2010: 110th General Meeting (Abstracts of the Annual Meeting of the American Society for Microbiology) . 1 p.

    Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research

  10. Published

    Genetic variation in the Staphylococcus aureus 8325 strain lineage revealed by whole-genome sequencing

    Bæk, K. T., Frees, Dorte, Renzoni, A., Barras, C., Rodriguez, N., Manzano, C. & Kelley, W. L., 2013, In: P L o S One. 8, 9, 16 p., e77122.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    β-lactam resistance in methicillin-resistant Staphylococcus aureus USA300 is increased by inactivation of the ClpXP protease

    Bæk, K. T., Gründling, A., Mogensen, R. G., Thøgersen, L., Petersen, A., Paulander, W. E. A. & Frees, Dorte, 2014, In: Antimicrobial Agents and Chemotherapy. 58, 8, p. 4593-4603 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    The food safety value of de-boning finishing pig carcasses with lesions indicative of prior septicaemia

    Bækbo, A. K., Petersen, J. V., Larsen, M. H. & Alban, L. M., Nov 2016, In: Food Control. 69, p. 177-184

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Complete chromosome sequence of Carnobacterium maltaromaticum LMA 28

    Cailliez-Grimala, C., Chaillou, S., Anba-Mondoloni, J., Loux, V., Afzal, M. I., Rahman, A., Kergourlay, G., Champomier-Vergès, M., Zagorec, M., Dalgaard, P., Leisner, Jørgen, Prévost, H., Revol-Junelles, A. & Borges, F., 2013, In: Genome Announcements. 1 , 1, 2 p., e00115-12.

    Research output: Contribution to journal › Letter › Research › peer-review

  14. Published

    Cross-Talk between Staphylococcus aureus and Other Staphylococcal Species via the agr Quorum Sensing System

    Canovas de la Nuez, J., Baldry, M., Bojer, Martin Saxtorph, Andersen, P. S., Grzeskowiak, P. K., Stegger, M., Damborg, Peter Panduro, Olsen, Christian Adam & Ingmer, Hanne, 2016, In: Frontiers in Microbiology. 7, 1733.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Moving objects by imagination? Amount of finger movement and pendulum length determine success in the Chevreul pendulum illusion

    Cantergi, D., Awasthi, B. & Friedman, J., 2021, In: Human Movement Science. 80, 9 p., 102879.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Genomic characterization, phylogenetic analysis, and identification of virulence factors in Aerococcus sanguinicola and Aerococcus urinae strains isolated from infection episodes

    Carkaci, D., Højholt, K., Nielsen, X. C., Dargis, R., Rasmussen, Simon, Skovgaard, O., Fuursted, K., Andersen, P. S., Stegger, M. & Christensen, J. J., Nov 2017, In: Microbial Pathogenesis. 112, p. 327-340 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Expert opinion on livestock antimicrobial usage indications and patterns in Denmark, Portugal and Switzerland

    Carmo, L. P., Bouzalas, I., Nielsen, Liza Rosenbaum, Alban, L. M., da Costa, P. M., Müntener, C., Schüpbach-Regula, G., Abreu, Y. & Magouras, I., Nov 2018, p. 1.

    Research output: Contribution to conference › Poster › Research › peer-review

  18. Published

    Presencia de Salmonella spp en plantas de beneficio porcícolas en Colombia: revisión sistemática y metaanálisis

    Carrascal-Camacho, A. K., Barrientos-Anzol, I., Sampedro, F., Rojas, F., Pérez, M., Dalsgaard, Anders, Pulido-Villamarín, A. A. & Camacho-Carrillo, M. A., 2023, In: Revista de Investigaciones Veterinarias del Peru. 34, 6, 10 p., e25111.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Cloning and occurrence of czrC, a gene conferring cadmium and zinc resistance in methicillin-resistant Staphylococcus aureus CC398 isolates

    Cavaco, L. M., Hasman, H., Stegger, M., Andersen, P. S., Skov, R., Fluit, A. C., Ito, T. & Aarestrup, F. M., Sep 2010, In: Antimicrobial Agents and Chemotherapy. 54, 9, p. 3605-8 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Bacterial species diversity of traditionally ripened sheep legs from the Faroe Islands (skerpikjøt)

    Charmpi, C., Thamsborg, K. K. M., Mikalsen, S. O., Magnussen, E., Sosa Fajardo, A., Van der Veken, D., Leisner, Jørgen & Leroy, F., 2023, In: International Journal of Food Microbiology. 386, 110023.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Increased risk of Staphylococcus aureus bacteremia in hemodialysis—A nationwide study

    Chaudry, M. S., Gislason, Gunnar Hilmar, Kamper, A. L., Rix, M., Larsen, A. R., Petersen, A., Andersen, P. S., Skov, R. L., Fosbøl, Emil Loldrup, Westh, Henrik T., Schønheyder, H. C., Benfield, Thomas, Fowler, V. G., Torp-Pedersen, C. & Bruun, Niels Eske, 2019, In: Hemodialysis International. 23, 2, p. 230-238 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Effect of clove (Syzygium aromaticum) and seaweed (Kappaphycus alvarezii) water extracts pretreatment on lipid oxidation in sun-dried sardines (Rastrineobola argentea) from Lake Victoria, Tanzania

    Chaula, D., Laswai, H., Chove, B., Dalsgaard, Anders, Mdegela, R., Jacobsen, C. & Hyldig, G., 2019, In: Food Science and Nutrition. 7, 4, p. 1406-1416 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Changes in fatty acids during storage of artisanal-processed freshwater sardines (Rastrineobola argentea)

    Chaula, D., Jacobsen, C., Laswai, H. S., Chove, B. E., Dalsgaard, Anders, Mdegela, R. & Hyldig, G., 2023, In: Food Science and Nutrition. 11, 6, p. 3040-3047

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Fatty Acid Profiles and Lipid Oxidation Status of Sun Dried, Deep Fried, and Smoked Sardine (Rastrineobola argentea) from Lake Victoria, Tanzania

    Chaula, D., Laswai, H., Chove, B., Dalsgaard, Anders, Mdegela, R. & Hyldig, G., 2019, In: Journal of Aquatic Food Product Technology. 28, 2, p. 165-176 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Farmer preference, utilization, and biochemical composition of improved cassava (Manihot esculenta Crantz) varieties in southeastern Africa

    Chiwona-Karltun, L., Nyirenda, D., Mwansa, C. N., Kongor, J. E., Brimer, L., Haggblade, S. & Afoakwa, E. O., 2015, In: Economic Botany. 69, 1, p. 42-56 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Varietal diversity and processing effects on the biochemical composition, cyanogenic glucoside potential (HCNp) and appearance of cassava flours from South-Eastern African region

    Chiwona-Karltuna, L., Afoakwa, E. O., Nyirenda, D., Mwansa, C. N., Kongor, J. E. & Brimer, L., 2015, In: International Food Research Journal. 22, 3, p. 973-980 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Genetic relationship among avian isolates classified as Pasteurella haemolytica. 'Actinobacillus salpingitidis' or Pasteurella anatis with proposal of Gallibacterium anatis gen. nov., comb. nov. and description of additional genomospecies with Gallibacterium gen. nov

    Christensen, Henrik, Bisgaard, M., Bojesen, Anders Miki, Mutters, R. & Olsen, John Elmerdahl, Jan 2003, In: International Journal of Systematic and Evolutionary Microbiology. 53, 1, p. 275-287 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Arian pasteurellosis: Taxonomy of the organisms involved and aspects of pathogenesis

    Christensen, Jens Peter & Bisgaard, M., 1 Jan 1997, In: Avian Pathology. 26, 3, p. 461-483 23 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Salmonella enterica serovar Gallinarum biovar gallinarum in layers: Epidemiological investigations of a recent outbreak in Denmark

    Christensen, Jens Peter & Skov, M. N., 1 Sep 1994, In: Avian Pathology. 23, 3, p. 489-501 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    Phenotypic and genotypic characters of isolates of Pasteurella multocida obtained from back-yard poultry and from two outbreaks of avian cholera in avifauna in Denmark

    Christensen, Jens Peter, Dietz, Hans Henrik & Bisgaard, M., 1 Jan 1998, In: Avian Pathology. 27, 4, p. 373-381 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Characterization of Salmonella Enterica Serovar Gallinarum Biovars Gallinarum and Pullorum By Plasmid Profiling and Biochemical Analysis

    Christensen, Jens Peter, Olsen, John Elmerdahl, Hansen, H. C. & Bisgaard, M., 1 Sep 1992, In: Avian Pathology. 21, 3, p. 461-470 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    The gastrointestinal tract as a port of entry for bacterial infections in poultry

    Christensen, Jens Peter, Chadfield, M. S., Olsen, John Elmerdahl & Bisgaard, M., 20 Dec 2006, Avian Gut Function in Health and Disease. CABI Publishing, Vol. 28. p. 244-258 15 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  33. Published

    Ribotypes of Salmonella enterica serovar Gallinarum biovars gallinarum and pullorum

    Christensen, Jens Peter, Olsen, John Elmerdahl & Bisgaard, M., 1 Dec 1993, In: Avian Pathology. 22, 4, p. 725-738 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    1-β-vicianosyl-(S)-2-methylbutyrate, a 1-O-acylglycoside from Acacia sieberana var. Woodii

    Christensen, Søren Brøgger, Brimer, L. & Nartey, F., 1982, In: Phytochemistry. 21, 11, p. 2683-2685 3 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    The expression signatures in liver and adipose tissue from obese Göttingen Minipigs reveal a predisposition for healthy fat accumulation

    Cirera, Susanna, Taşöz, E., Juul Jacobsen, M., Schumacher-Petersen, Camilla, Østergaard Christoffersen, B., Kaae Kirk, R., Pagh Ludvigsen, T., Hvid, H., Duelund Pedersen, H., Olsen, Lisbeth Høier & Fredholm, Merete, 2020, In: Nutrition and Diabetes. 10, 1, 12 p., 9.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    The effectiveness of different intervention strategies for the prevention of zoonotic metacercariae infection in cultured fish

    Clausen, J. H., Madsen, Henry, Murrell, K. D., Bui, T. N., Nguyen, N. T., Do, D. T., Thi, L. A. N., Manh, H. N. & Dalsgaard, Anders, 2013, In: Aquaculture. 416-417, p. 135-140 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Integrated parasite management: path to sustainable control of fishborne trematodes in aquaculture

    Clausen, J. H., Madsen, Henry, Van, P. T., Dalsgaard, Anders & Murrell, K. D., 1 Jan 2015, In: Trends in Parasitology. 31, 1, p. 8-15 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Staphylococcus aureus colonization in atopic eczema and its association with filaggrin gene mutations

    Clausen, M. L., Edslev, S. M., Andersen, P. S., Clemmensen, K., Krogfelt, K. A. & Agner, Tove, Nov 2017, In: British Journal of Dermatology. 177, 5, p. 1394-1400 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Temporal variation of Staphylococcus aureus clonal complexes in atopic dermatitis: a follow-up study

    Clausen, M., Edslev, S. M., Nørreslet, L. B., Sørensen, J. A., Andersen, P. S. & Agner, Tove, Jan 2019, In: British Journal of Dermatology. 180, 1, p. 181-186 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    Association of Disease Severity With Skin Microbiome and Filaggrin Gene Mutations in Adult Atopic Dermatitis

    Clausen, M. L., Agner, Tove, Lilje, B., Edslev, S. M., Johannesen, T. B. & Andersen, P. S., Mar 2018, In: JAMA Dermatology. 154, 3, p. 293-300

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    In vivo expression of antimicrobial peptides in atopic dermatitis

    Clausen, M., Slotved, H., Krogfelt, K. A., Andersen, P. S. & Agner, Tove, Jan 2016, In: Experimental Dermatology. 25, 1, p. 3-9

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Sub-inhibitory concentrations of antibiotics increase tolerance of Staphylococcus aureus to different classes of antibiotics

    Cohn, M. T., Haaber, J. K. & Ingmer, Hanne, 2010. 1 p.

    Research output: Contribution to conference › Poster › Research

  43. Published

    Engineering of receptor-binding proteins in bacteriophages and phage tail-like bacteriocins

    Dams, D., Brøndsted, Lone, Drulis-Kawa, Z. & Briers, Y., 2019, In: Biochemical Society Transactions. 47, 1, p. 449-460 12 p.

    Research output: Contribution to journal › Review › Research › peer-review

  44. Published

    Cephalosporin-resistant Escherichia coli isolated from farm workers and pigs in northern Vietnam

    Dang, S. T. T., Bortolaia, V., Tran, N. T., Le, H. Q. & Dalsgaard, Anders, 2018, In: Tropical Medicine and International Health. 23, 4, p. 415-424 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Research note: Occurrence of mcr-encoded colistin resistance in Escherichia coli from pigs and pig farm workers in Vietnam

    Dang, S. T. T., Truong, D. T. Q., Olsen, John Elmerdahl, Tran, N. T., Truong, G. T. H., Vu, H. T. K. & Dalsgaard, Anders, 2020, In: FEMS Microbes. 1, 1, 6 p., xtaa003.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    Penicillin resistance and serotype distribution of Streptococcus pneumoniae in Ghanaian children less than six years of age

    Dayie, N. T. K. D., Arhin, R. E., Newman, M. J., Dalsgaard, Anders, Bisgaard, M., Frimodt-Moller, N. & Slotved, H., 2013, In: B M C Infectious Diseases. 13, p. 1-7 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Multidrug-resistant Streptococcus pneumoniae isolates from healthy Ghanaian preschool children

    Dayie, N. T. K. D., Arhin, R. E., Newman, M. J., Dalsgaard, Anders, Bisgaard, M., Frimodt-Møller, N. & Slotved, H., 10 Dec 2015, In: Microbial Drug Resistance. 21, 6, p. 636-642 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Methicillin-resistant Staphylococcus pseudintermedius in Italian dogs

    De Lucia, M., Giordano, A., Moodley, Arshnee, Fondati, A., Caldin, M., Furlanello, T. & Guardabassi, Luca, 2009. 1 p.

    Research output: Contribution to conference › Poster › Research

  49. Published

    Cross-sectional study identifies lower risk of Staphylococcus aureus nasal colonization in Danish blood donors with hidradenitis suppurativa symptoms

    Dinh, K. M., Erikstrup, L. T., Andersen, Rune Kjærsgaard, Andersen, P. S., Mikkelsen, S., Kjerulff, B. D., Burgdorf, K. S., Hansen, Thomas Folkmann, Nielsen, K. R., Hjalgrim, H., Jemec, Gregor, Ullum, H., Erikstrup, C. & Pedersen, O. B., 2020, In: British Journal of Dermatology. 183, 2, p. 387-389

    Research output: Contribution to journal › Letter › Research › peer-review

  50. Published

    Convergent evolution involving dimeric and trimeric dUTPases in pathogenicity island mobilization

    Donderis, J., Bowring, Janine Zara, Maiques, E., Ciges Tomas, Jose Rafael, Alite, C., Mehmedov, I., Tormo-Mas, M. A., Penadés, J. R. & Marina, A., Sep 2017, In: PLoS Pathogens. 13, 9, p. e1006581

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    Presence and analysis of plasmids in human and animal associated Arcobacter species

    Douidah, L., De Zutter, L., Van Nieuwerburgh, F., Deforce, D., Ingmer, Hanne, Vandenberg, O., Van den Abeele, A. & Houf, K., 2014, In: PloS one. 9, 1, 8 p., e85487.

    Research output: Contribution to journal › Journal article › Research › peer-review

  52. Published

    Skin microbiome in atopic dermatitis

    Edslev, S. M., Agner, Tove & Andersen, P. S., 2020, In: Acta Dermato-Venereologica. 100, 100-year theme Atopic dermatitis, p. 358-366 9 p., adv00164.

    Research output: Contribution to journal › Review › Research › peer-review

  53. Published

    Genomic analysis reveals different mechanisms of fusidic acid resistance in Staphylococcus aureus from Danish atopic dermatitis patients

    Edslev, S. M., Clausen, M. L., Agner, Tove, Stegger, M. & Andersen, P. S., 2018, In: Journal of Antimicrobial Chemotherapy. 73, 4, p. 856-861 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  54. Published

    Staphylococcal communities on skin are associated with atopic dermatitis and disease severity.

    Edslev, S. M., Olesen, C. M., Nørreslet, L. B., Ingham, A. C., Iversen, S., Lilje, B., Clausen, M. L., Jensen, J. S., Stegger, M., Agner, Tove & Andersen, P. S., 2021, In: Microorganisms. 9, 2, p. 1-17 17 p., 432.

    Research output: Contribution to journal › Journal article › Research › peer-review

  55. Published

    Identification of cutaneous fungi and mites in adult atopic dermatitis: analysis by targeted 18S rRNA amplicon sequencing

    Edslev, S. M., Andersen, P. S., Agner, Tove, Saunte, Ditte Marie, Ingham, A. C., Johannesen, T. B. & Clausen, M. L., 2021, In: BMC Microbiology. 21, 1, 8 p., 72.

    Research output: Contribution to journal › Journal article › Research › peer-review

  56. Published

    Soluble C-Type Lectin-Receptor Ligands Stimulate ROS Production in Dendritic Cells and Potentiate Killing of MRSA as Well as the MRSA Induced IL-12 Production

    Eld, H. M. S., Johnsen, Peter Riber, Nielsen, E. M., Jørgensen, F. Z., Lindstrøm-Svendsen, M., Baldry, M., Ingmer, Hanne & Frøkiær, Hanne, 2022, In: Frontiers in Immunology. 13, 845881.

    Research output: Contribution to journal › Journal article › Research › peer-review

  57. Published

    Cefoxitin treatment of MRSA leads to a shift in the IL-12/IL-23 production pattern in dendritic cells by a mechanism involving changes in the MAPK signaling

    Eld, H. M. S., Nielsen, E. M., Johnsen, Peter Riber, Marengo, M., Kamper, I. W., Frederiksen, L., Bonomi, F., Frees, Dorte, Iametti, S. & Frøkiær, Hanne, 2021, In: Molecular Immunology. 134, p. 1-12 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  58. Published

    Antimicrobial resistant E. coli and enterococci in pangasius fillets and prawns in Danish retail imported from Asia.

    Ellis-Iversen, J., Seyfarth, A. M., Korsgaard, H., Bortolaia, V., Munck, N. & Dalsgaard, Anders, 2020, In: Food Control. 114, 106958.

    Research output: Contribution to journal › Journal article › Research › peer-review

  59. Published

    Comparative genomic analysis of Aeromonas dhakensis and Aeromonas hydrophila from diseased striped catfish fingerlings cultured in Vietnam

    Erickson, Vera Irene, Khoi, L. M., Hounmanou, Yaovi Mahuton Gildas, Dung, T. T., Phu, T. M. & Dalsgaard, Anders, 2023, In: Frontiers in Microbiology. 14, 14 p., 1254781.

    Research output: Contribution to journal › Journal article › Research › peer-review

  60. Published

    Genomic traits of Aeromonas veronii isolated from slaughtered Danish broilers

    Erickson, Vera Irene, Alfifi, Ahmed Eassa H, Hounmanou, Yaovi Mahuton Gildas, Sana, M. J., Christensen, Jens Peter & Dalsgaard, Anders, 2023, In: Veterinary Microbiology. 283, 109772.

    Research output: Contribution to journal › Journal article › Research › peer-review

  61. Published

    Cohort description: The Danish blood donor staphylococcus aureus carriage study

    Erikstrup, L. T., Dinh, K. M., Andersen, P. S., Skov, R. L., Kaspersen, K. A., Nielsen, K. R., Ellermann-Eriksen, S. & Erikstrup, C., 2019, In: Clinical Epidemiology. 11, p. 885-900 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  62. Published

    Association between SARS-CoV-2 infection and self-harm: Danish nationwide register-based cohort study

    Erlangsen, A., Qin, P., Madsen, Trine, Hawton, K., Osler, Merete, Hjorthøj, Carsten, Benros, Michael Eriksen, Ethelberg, Steen, Mølbak, Kåre, Laursen, T. M., Nordentoft, Merete & Nilsson, S. F., 2023, In: The British journal of psychiatry : the journal of mental science. 222, 4, p. 167–174 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  63. Published

    Adaptive laboratory evolution and independent component analysis disentangle complex vancomycin adaptation trajectories

    Fait, A., Seif, Y., Mikkelsen, K., Poudel, S., Wells, J. M., Palsson, B. O. & Ingmer, Hanne, 2022, In: Proceedings of the National Academy of Sciences of the United States of America. 119, 30, e2118262119.

    Research output: Contribution to journal › Journal article › Research › peer-review

  64. Published

    Evolutionary history of Staphylococcus aureus influences antibiotic resistance evolution

    Fait, A., Andersson, D. I. & Ingmer, Hanne, 2023, In: Current Biology. 33, 16, p. 3389-3397.e5

    Research output: Contribution to journal › Journal article › Research › peer-review

  65. Published

    Proteomic analyses of iron-responsive, Clp-dependent changes in Staphylococcus aureus

    Farrand, A. J., Friedman, D. B., Reniere, M. L., Ingmer, Hanne, Frees, Dorte & Skaar, E. P., Apr 2015, In: Pathogens and Disease. 73, 3, 6 p., ftv004.

    Research output: Contribution to journal › Journal article › Research › peer-review

  66. Published

    Regulation of host hemoglobin binding by the Staphylococcus aureus Clp proteolytic system

    Farrand, A. J., Reniere, M. L., Ingmer, Hanne, Frees, Dorte & Skaar, E. P., 2013, In: Journal of Bacteriology. 195, 22, p. 5041-5050 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  67. Published

    Trapping and proteomic identification of cellular substrates of the ClpP protease in Staphylococcus aureus

    Feng, J., Michalik, S., Varming, A. N., Andersen, J. H., Albrecht, D., Jelsbak, L., Krieger, S., Ohlsen, K., Hecker, M., Gerth, U., Ingmer, Hanne & Frees, Dorte, 2013, In: Journal of Proteome Research. 12, 2, p. 547-558 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  68. Published

    Diet-Dependent Changes of the DNA Methylome Using a Göttingen Minipig Model for Obesity

    Feng, Y., Cirera, Susanna, Taşöz, E., Liu, Y., Olsen, Lisbeth Høier, Christoffersen, B. Ø., Pedersen, H. D., Ludvigsen, T. P., Kirk, R. K., Schumacher-Petersen, Camilla, Deng, Y., Fredholm, Merete & Gao, Fei, 2021, In: Frontiers in Genetics. 12, 632859.

    Research output: Contribution to journal › Journal article › Research › peer-review

  69. Published

    Bacteriophages benefit from generalized transduction

    Fillol-Salom, A., Alsaadi, Ahlam Musaibeh M, Sousa, J. A. M. D., Zhong, L., Foster, K. R., Rocha, E. P. C., Penadés, J. R., Ingmer, Hanne & Haaber, J., 2019, In: PLOS Pathogens. 15, 7, 22 p., e1007888.

    Research output: Contribution to journal › Journal article › Research › peer-review

  70. Published

    PasT of Escherichia coli sustains antibiotic tolerance and aerobic respiration as a bacterial homolog of mitochondrial Coq10

    Fino, C., Vestergaard, M., Ingmer, Hanne, Pierrel, F., Gerdes, K. & Harms, A., 2020, In: MicrobiologyOpen. 9, 8, 36 p., e1064.

    Research output: Contribution to journal › Journal article › Research › peer-review

  71. Published

    A Cross-Sectional Study of SARS-CoV-2 Antibodies and Risk Factors for Seropositivity in Staff in Day Care Facilities and Preschools in Denmark

    Fogh, K., Eriksen, A. R. R., Larsen, T. G., Hasselbalch, R. B., Bundgaard, H., Scharff, B., Nielsen, S. D., Jørgensen, C. S., Erikstrup, C., Østergaard, L., Ellermann-Eriksen, S., Andersen, B., Nielsen, H., Johansen, I. S., Wiese, L., Hindhede, L., Mikkelsen, S., Sækmose, S. G., Aagaard, B., Holm, D. K. & 16 others, Harritshøj, Lene Holm, Simonsen, L., Fischer, Thea Kølsen, Folke, Fredrik, Lippert, F., Ostrowski, Sisse Rye, Benfield, Thomas, Mølbak, Kåre, Ethelberg, Steen, Koch, A., Vangsted, A., Krause, Tyra Grove, Fomsgaard, A., Ullum, H., Skov, R. & Iversen, Kasper, 2023, In: Microbiology Spectrum. 11, 1, 11 p., e0417422.

    Research output: Contribution to journal › Journal article › Research › peer-review

  72. Published

    Molecular epidemiology of the SARS-CoV-2 variant Omicron BA.2 sub-lineage in Denmark, 29 November 2021 to 2 January 2022

    Fonager, J., Bennedbæk, M., Bager, P., Wohlfahrt, J., Ellegaard, K. M., Ingham, A. C., Edslev, S. M., Stegger, M., Sieber, R. N., Lassauniere, R., Fomsgaard, A., Lillebaek, T., Svarrer, C. W., Møller, F. T., Møller, C. H., Legarth, R., Sydenham, T. V., Steinke, K., Paulsen, S. J., Castruita, J. A. S. & 15 others, Schneider, Uffe Vest, Schouw, C. H., Nielsen, X. C., Overvad, M., Nielsen, R. T., Marvig, R. L., Pedersen, M. S., Nielsen, L., Nilsson, L. L., Bybjerg-Grauholm, J., Tarpgaard, I. H., Ebsen, T. S., Lam, J. U. H., Gunalan, V. & Rasmussen, M., 2022, In: Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin. 27, 10, 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  73. Published

    A universal primer-independent next-generation sequencing approach for investigations of norovirus outbreaks and novel variants

    Fonager, J., Stegger, M., Rasmussen, L. D., Poulsen, M. W., Ronn, J., Andersen, P. S. & Fischer, Thea Kølsen, 2017, In: Scientific Reports. 7, 11 p., 813.

    Research output: Contribution to journal › Journal article › Research › peer-review

  74. Published

    Faecal contamination and health aspects of processing tomatoes (Solanum lycopersicum) irrigated with wastewater treated by decentralised wastewater treatment technologies

    Forslund, A., Battilani, A., Ensink, J. H. J., Markussen, Bo, Gola, S., Sandei, L., Solimando, D. & Dalsgaard, Anders, 2013, In: Acta Horticulturae. 971, p. 85-92 6 p.

    Research output: Contribution to journal › Conference article › Research › peer-review

  75. Published

    Does Virulence Assessment of Vibrio anguillarum Using Sea Bass (Dicentrarchus labrax) Larvae Correspond with Genotypic and Phenotypic Characterization?

    Frans, I., Dierckens, K., Crauwels, S., Van Assche, A., Leisner, Jørgen, Larsen, M. H., Michiels, C. W., Willems, K. A., Lievens, B., Bossier, P. & Rediers, H., 2013, In: P L o S One. 8, 8, p. 1-9 9 p., e70477.

    Research output: Contribution to journal › Journal article › Research › peer-review

  76. Published

    Bacterial chitinases and chitin-binding proteins as virulence factors

    Frederiksen, R. F., Paspaliari, D. K., Larsen, T., Storgaard, B. G., Larsen, M. H., Ingmer, Hanne, Palcic, M. & Leisner, Jørgen, 2013, In: Microbiology. 159, 5, p. 833-847 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  77. Published

    Effects of Listeria monocytogenes EGD-e and Salmonella enterica ser. Typhimurium LT2 chitinases on intracellular survival in Dictyostelium discoideum and mammalian cell lines

    Frederiksen, R. F. & Leisner, Jørgen, May 2015, In: F E M S Microbiology Letters. 362, 10, 7 p., fnv067.

    Research output: Contribution to journal › Journal article › Research › peer-review

  78. Published

    A diverse range of bacterial and eukaryotic chitinases hydrolyzes the LacNAc (Galβ1-4GlcNAc) and LacdiNAc (GalNAcβ1-4GlcNAc) motifs found on vertebrate and insect cells

    Frederiksen, R. F., Yoshimura, Y., Storgaard, B. G., Paspaliari, D. K., Petersen, B. O., Chen, K., Larsen, T., Duus, J. Ø., Ingmer, Hanne, Bovin, N. V., Westerlind, U., Blixt, K. O., Palcic, M. M. & Leisner, Jørgen, 2015, In: The Journal of Biological Chemistry. 290, 9, p. 5354-5366 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  79. Published

    Stress Responses in Staphylococcus aureus

    Frees, Dorte & Ingmer, Hanne, Oct 2016, Staphylococcus: Genetics and Physiology. Somerville, G. A. (ed.). Caister Academic Press, p. 221-248

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  80. Published

    Clp chaperones and proteases are central in stress survival, virulence and antibiotic resistance of Staphylococcus aureus

    Frees, Dorte, Gerth, U. & Ingmer, Hanne, 2014, In: International Journal of Medical Microbiology. 304, 2, p. 142-149 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  81. Published

    Finding New Fundamental Pieces for the Bacterial Cell Division Puzzle

    Frees, Dorte & Ingmer, Hanne, 2022, In: mBio. 13, 4, e0073722.

    Research output: Contribution to journal › Journal article › Research › peer-review

  82. Published

    Bacterial proteases and virulence

    Frees, Dorte, Brøndsted, Lone & Ingmer, Hanne, 2013, Regulated proteolysis in microorganisms. Dougan, D. A. (ed.). Springer, p. 161-192 32 p. (Subcellular biochemistry, Vol. 66).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  83. Published

    Human antimicrobial peptide, LL-37, induces non-inheritable reduced susceptibility to vancomycin in Staphylococcus aureus

    Friberg, C., Haaber, J. K., Vestergaard, M., Fait, A., Perrot, V., Levin, B. R. & Ingmer, Hanne, 2020, In: Scientific Reports. 10, 1, 8 p., 13121.

    Research output: Contribution to journal › Journal article › Research › peer-review

  84. Published

    Impact of the Gram-Negative-Selective Inhibitor MAC13243 on In Vitro Simulated Gut Microbiota

    Svanberg Frisinger, Frida, Pirolo, Mattia, Ng, D. Y. K., Mao, Xiaotian, Nielsen, Dennis Sandris & Guardabassi, Luca, 2022, In: Pharmaceuticals. 15, 6, 731.

    Research output: Contribution to journal › Journal article › Research › peer-review

  85. Published

    Determinants of sporadic Campylobacter infections in Denmark: a nationwide case-control study among children and young adults

    Gaardbo Kuhn, K., Nielsen, E. M., Mølbak, Kåre & Ethelberg, Steen, 2018, In: Clinical Epidemiology. 10, p. 1695-1707

    Research output: Contribution to journal › Journal article › Research › peer-review

  86. Published

    A simple and reliable methodology to detect egg white in art samples

    Gambino, Michela, Cappitelli, F., Cattò, C., Carpen, A., Principi, P., Ghezzi, L., Bonaduce, I., Galano, E., Pucci, P., Birolo, L., Villa, F. & Forlani, F., 2013, In: Journal of Biosciences.

    Research output: Contribution to journal › Journal article › Research › peer-review

  87. Published

    The tombstones at the Monumental Cemetery of Milano select for a specialized microbial community

    Gambino, Michela, Lepri, G., Štovícek, A., Ghazayarn, L., Villa, F., Gillor, O. & Cappitelli, F., 2021, In: International Biodeterioration and Biodegradation. 164, 105298.

    Research output: Contribution to journal › Journal article › Research › peer-review

  88. Published

    Phage s144, a new polyvalent phage infecting salmonella spp. And cronobacter sakazakii

    Gambino, Michela, Sørensen, Anders Nørgaard, Ahern, S., Smyrlis, G., Gencay, Y. E., Hendrix, H., Neve, H., Noben, J. P., Lavigne, R. & Brøndsted, Lone, 2020, In: International Journal of Molecular Sciences . 21, 15, 42 p., 5196.

    Research output: Contribution to journal › Journal article › Research › peer-review

  89. Published

    Flagellotropic phages: common yet diverse host interaction strategies

    Gambino, Michela & Sørensen, Martine Camilla Holst, 2024, In: Current Opinion in Microbiology. 78, 7 p., 102451.

    Research output: Contribution to journal › Review › Research › peer-review

  90. Published

    Looking into the future of phage-based control of zoonotic pathogens in food and animal production

    Gambino, Michela & Brøndsted, Lone, 2021, In: Current Opinion in Biotechnology. 68, p. 96-103 8 p.

    Research output: Contribution to journal › Review › Research › peer-review

  91. Published

    SWOT analysis of risk factors associated with introduction of African Swine Fever through vehicles returning after export of pigs

    Gao, Y., Nielsen, L. H., Boklund, Anette, de Jong, M. C. M. & Alban, L., 2023, In: Frontiers in Veterinary Science. 9, 1049940.

    Research output: Contribution to journal › Journal article › Research › peer-review

  92. Published

    Estimating the impact of low temperature on African swine fever virus transmission through contaminated environments

    Gao, Y., Boklund, Anette, Nielsen, L. H., Alban, L. & de Jong, M. C. M., 2023, In: Preventive Veterinary Medicine. 219, 105991.

    Research output: Contribution to journal › Journal article › Research › peer-review

  93. Published

    ECOPHAGE: Combating Antimicrobial Resistance Using Bacteriophages for Eco-Sustainable Agriculture and Food Systems

    García, P., Tabla, R., Anany, H., Bastias, R., Brøndsted, Lone, Casado, S., Cifuentes, P., Deaton, J., Denes, T. G., Islam, M. A., Lavigne, R., Moreno-Switt, A. I., Nakayama, N., Muñoz Madero, C., Sulakvelidze, A., Svircev, A. M., Wagemans, J., Biosca, E. G. & Rivera, D., 2023, In: Viruses. 15, 11, 18 p., 2224.

    Research output: Contribution to journal › Journal article › Research › peer-review

  94. Published

    F4- and F18-Positive Enterotoxigenic Escherichia coli Isolates from Diarrhea of Postweaning Pigs: Genomic Characterization

    García, V., Gambino, Michela, Pedersen, K., Haugegaard, S., Olsen, John Elmerdahl & Herrero-Fresno, A., 2020, In: Applied and Environmental Microbiology. 86, 23

    Research output: Contribution to journal › Journal article › Research › peer-review

  95. Published

    Methods for isolation, purification, and propagation of bacteriophages of Campylobacter jejuni

    Gencay, Y. E., Birk, T., Sørensen, Martine Camilla Holst & Brøndsted, Lone, 2017, Campylobacter jejuni: Methods and Protocols. Humana Press, Vol. 1512. p. 19-28 10 p. (Methods in Molecular Biology, Vol. 1512).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  96. Published

    Bacteriophages for biological control of foodborne pathogens

    Gencay, Y. E. & Brøndsted, Lone, 2019, Food Microbiology: Fundamentals and Frontiers. 5 ed. Wiley, p. 755-786 32 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  97. Published

    The genera of bacteriophages and their receptors are the major determinants of host range

    Gencay, Y. E., Gambino, Michela, Prüssing, T. F. & Brøndsted, Lone, 2019, In: Environmental Microbiology. 21, 6, p. 2095-2111

    Research output: Contribution to journal › Journal article › Research › peer-review

  98. Published

    Whole-genome sequence of the bacteriophage-sensitive strain Campylobacter jejuni NCTC12662

    Gencay, Y. E., Sørensen, Martine Camilla Holst & Brøndsted, Lone, 2017, In: Genome Announcements. 5, 21, e00409-17.

    Research output: Contribution to journal › Journal article › Research › peer-review

  99. Published

    Phase variable expression of a single phage receptor in Campylobacter jejuni NCTC12662 influences sensitivity toward several diverse CPS-dependent phages

    Gencay, Y. E., Sørensen, Martine Camilla Holst, Wenzel, C. Q., Szymanski, C. M. & Brøndsted, Lone, Feb 2018, In: Frontiers in Microbiology. 9, 2, 13 p., 82.

    Research output: Contribution to journal › Journal article › Research › peer-review

  100. Published

    Koyun orijinli Toxoplasma gondii izolatlarının multilokus PCR-RFLP yöntemi ile genotiplendirilmesi

    Gençay, Y. E., Gökpinar, S., Babür, C. & Yildiz, K., 2019, In: Ankara Universitesi Veteriner Fakultesi Dergisi. 66, 3, p. 273-280 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

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