Food Safety and Zoonoses

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  1. 2022
  2. Published

    Nationwide study on SARS-CoV-2 transmission within households from lockdown to reopening, Denmark, 27 February 2020 to 1 August 2020

    Lyngse, Frederik Plesner, Kirkeby, Carsten, Halasa, T., Andreasen, V., Skov, R. L., Møller, F. T., Krause, Tyra Grove & Mølbak, Kåre, 2022, In: Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin. 27, 6, p. 1-12

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Transmission of SARS-CoV-2 Omicron VOC subvariants BA.1 and BA.2: Evidence from Danish Households

    Lyngse, Frederik Plesner, Kirkeby, Carsten, Denwood, Matt, Christiansen, L. E., Mølbak, Kåre, Møller, C. H., Skov, R. L., Krause, Tyra Grove, Rasmussen, M., Sieber, R. N., Johannesen, T. B., Lillebaek, Troels, Fonager, J., Fomsgaard, A., Møller, F. T., Stegger, M., Overvad, M., Spiess, K. & Mortensen, Laust Hvas, 30 Jan 2022, 2 p.

    Research output: Other contribution › Research

  4. Published

    Scientists’ Assessments of Research on Lactic Acid Bacterial Bacteriocins 1990–2010

    Martinenghi, Laura Daniela & Leisner, Jørgen, 2022, In: Frontiers in Microbiology. 13, 908336.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Observed protection against SARS-CoV-2 reinfection following a primary infection: A Danish cohort study among unvaccinated using two years of nationwide PCR-test data

    Michlmayr, D., Hansen, C. H., Gubbels, S. M., Valentiner-Branth, P., Bager, P., Obel, Niels, Drewes, B., Møller, C. H., Møller, F. T., Legarth, R., Mølbak, Kåre & Ethelberg, Steen, 2022, In: The Lancet Regional Health - Europe. 20, 100452.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Rapid in vivo development of resistance to daptomycin in vancomycin-resistant Enterococcus faecium due to genomic alterations

    Mollerup, S., Elmeskov, C., Pinholt, M., Sejersen, T. S., Pedersen, M. S., Worning, P., Frees, Dorte & Westh, Henrik T., 2022, In: FEMS Microbiology Letters. 369, 1, 6 p., 063.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Genomic analysis of sewage from 101 countries reveals global landscape of antimicrobial resistance

    Munk, P., Brinch, C., Møller, F. D., Petersen, T. N., Hendriksen, R. S., Seyfarth, A. M., Kjeldgaard, J. S., Svendsen, C. A., van Bunnik, B., Berglund, F., Bego, A., Power, P., Rees, C., Lambrinidis, D., Neilson, E. H. J., Gibb, K., Coventry, K., Collignon, P., Cassar, S., Allerberger, F. & 31 others, Begum, A., Hossain, Z. Z., Worrell, C., Vandenberg, O., Pieters, I., Victorien, D. T., Gutierrez, A. D. S., Soria, F., Grujić, V. R., Mazalica, N., Rahube, T. O., Tagliati, C. A., Rodrigues, D., Oliveira, G., de Souza, L. C. R., Ivanov, I., Juste, B. I., Oumar, T., Sopheak, T., Vuthy, Y., Ngandijo, A., Nzouankeu, A., Olivier, Z. A. A. J., Yost, C. K., Hansen, L. T., Jensen, P. E., Parimannan, S., Hounmanou, Yaovi Mahuton Gildas, Thomsen, J., Aarestrup, F. M. & Global Sewage Surveillance Consortium, G. S. S. C., 2022, In: Nature Communications. 13, 16 p., 7251.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    A porcine model of subcutaneous Staphylococcus aureus infection: a pilot study

    Nielsen, O. L., Mellergaard, M., Frees, Dorte, Larsen, M. N., Skov, Søren, Olsen, Lisbeth Høier & Reimann, Maria Josefine, 2022, In: APMIS - Journal of Pathology, Microbiology and Immunology. 130, 7, p. 359-370

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Adverse SARS-CoV-2-associated outcomes among people experiencing social marginalisation and psychiatric vulnerability: A population-based cohort study among 4,4 million people

    Nilsson, S. F., Laursen, T. M., Osler, Merete, Hjorthøj, Carsten, Benros, Michael Eriksen, Ethelberg, Steen, Mølbak, Kåre & Nordentoft, Merete, 2022, In: The Lancet Regional Health - Europe. 15 p., 100421.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Vaccination against SARS-CoV-2 infection among vulnerable and marginalised population groups in Denmark: A nationwide population-based study

    Nilsson, S. F., Laursen, T. M., Osler, Merete, Hjorthøj, Carsten, Benros, Michael Eriksen, Ethelberg, Steen, Mølbak, Kåre & Nordentoft, Merete, 2022, In: The Lancet Regional Health - Europe. 16, 14 p., 100355.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Intrinsic tet(L) sub-class in Bacillus velezensis and Bacillus amyloliquefaciens is associated with a reduced susceptibility toward tetracycline

    Nøhr-Meldgaard, K., Struve, C., Ingmer, Hanne & Agersø, Marie Yvonne Feraren, 2022, In: Frontiers in Microbiology. 13, 966016.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Rectal Colonization and Nosocomial Transmission of Carbapenem-Resistant Acinetobacter baumannii in an Intensive Care Unit, Southwest Nigeria

    Odih, Erkison Ewomazino, Irek, E. O., Obadare, T. O., Oaikhena, A. O., Afolayan, A. O., Underwood, A., Adenekan, A. T., Ogunleye, V. O., Argimon, S., Dalsgaard, Anders, Aanensen, D. M., Okeke, I. N. & Aboderin, A. O., 2022, In: Frontiers in Medicine. 9, 846051.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Determination of an optimal ELISA cut-off for the diagnosis of Toxoplasma gondii infection in pigs using Bayesian latent class modelling of data from multiple diagnostic tests

    Olsen, Abbey , Nielsen, H. V., Alban, L., Houe, Hans, Jensen, T. B. & Denwood, Matt, 2022, In: Preventive Veterinary Medicine. 201, 105606.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Estimating the true seroprevalence of Toxoplasma gondii in Danish pigs

    Olsen, Abbey , Sandberg, M., Houe, Hans, Nielsen, H. V., Denwood, Matt & Alban, L. M., 2022, 16th International Symposium of Veterinary Epidemiology and Economics: Connecting Animals, People, and their shared environments - Abstract book. p. 453 1 p. 36

    Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research › peer-review

  15. Published

    PREPAREDNESS FOR POTENTIAL FUTURE SEROLOGICAL SURVEILLANCE OF TOXOPLASMA GONDII IN THE DANISH PIG POPULATION: A REVIEW OF LATEST EPIDEMIOLOGICAL STUDIES FROM DENMARK

    Olsen, Abbey , Houe, Hans, Nielsen, H. V., Denwood, Matt, Sandberg, M., Pires, S. M. & Alban, L. M., 2022, p. 173-176.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  16. Published

    Investigating ways of detecting and handling findings indicating prior septicaemia in bovines

    Petersen, J. V., Abildgaard, K. S., Poulsen, M. K. & Alban, L., 2022, In: Food Control. 137, 108901.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Fecal Shedding of Multidrug Resistant Escherichia coli Isolates in Dogs Fed with Raw Meat-Based Diets in Brazil

    Ramos, C. P., Kamei, C. Y. I., Viegas, F. M., de Melo Barbieri, J., Cunha, J. L. R., Hounmanou, Yaovi Mahuton Gildas, Coura, F. M., Santana, J. A., Lobato, F. C. F., Bojesen, Anders Miki & Silva, R. O. S., 2022, In: Antibiotics. 11, 4, 534.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Excess all-cause mortality in the USA and Europe during the COVID-19 pandemic, 2020 and 2021

    Rossen, L. M., Nørgaard, S. K., Sutton, P. D., Krause, Tyra Grove, Ahmad, F. B., Vestergaard, L. S., Mølbak, Kåre, Anderson, R. N. & Nielsen, J., 2022, In: Scientific Reports. 12, 18559.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Pilot study on CHCF1 genotype in a pig challenge model for enterotoxigenic Escherichia coli F4ab/ac associated post-weaning diarrhea

    Rydal, Martin Peter, Gambino, Michela, Jørgensen, Claus Bøttcher, Poulsen, Louise Ladefoged, Brøndsted, Lone & Nielsen, Jens Peter, 2022, In: BMC Veterinary Research. 18, 382.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    From Alpha Diversity to Zzz: Interactions among sleep, the brain, and gut microbiota in the first year of life

    Schoch, S. F., Castro-Mejía, J. L., Krych, Lukasz, Leng, B., Kot, Witold, Kohler, M., Huber, R., Rogler, G., Biedermann, L., Walser, J. C., Nielsen, Dennis Sandris & Kurth, S., 2022, In: Progress in Neurobiology. 209, 11 p., 102208.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Survival of hospital- and community-associated Enterococcus faecium following exposure to in-use concentrations of the biocide sodium dichloroisocyanurate (NaDCC)

    Skive, Bolette, Lawaetz, A. C., Hammerum, A. M., Hasman, H., Pinholt, M., Jensen, C. S., Knudsen, J. D., Kjerulf, A. & Ingmer, Hanne, 2022, In: Journal of Global Antimicrobial Resistance. 29, p. 281-288 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Targeting the ATP synthase in bacterial and fungal pathogens: beyond Mycobacterium tuberculosis

    Vestergaard, M., Bald, D. & Ingmer, Hanne, 2022, In: Journal of Global Antimicrobial Resistance. 29, p. 29-41 13 p.

    Research output: Contribution to journal › Review › Research › peer-review

  23. Published

    A European survey on post-mortem inspection of finishing pigs: Total condemnation criteria to declare meat unfit for human consumption

    Vieira-Pinto, M., Langkabel, N., Santos, S., Alban, L., Laguna, J. G., Blagojevic, B., Meemken, D., Bonardi, S., Antunović, B., Ghidini, S., Maurer, P., Alvseike, O. & Laukkanen-Ninios, R., 2022, In: Research in Veterinary Science. 152, p. 72-82 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Genome Sequences of 16 Escherichia coli Bacteriophages Isolated from Wastewater, Pond Water, Cow Manure, and Bird Feces

    Vitt, Amira Ruslanovna, Ahern, S. J., Gambino, Michela, Sørensen, Martine Camilla Holst & Brøndsted, Lone, 2022, In: Microbiology resource announcements. 11, 10

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    The menaquinone pathway is important for susceptibility of Staphylococcus aureus to the antibiotic adjuvant, cannabidiol

    Wassmann, C. S., Rolsted, A. P., Lyngsie, M. C., Torres-Puig, S., Kronborg, T., Vestergaard, M., Ingmer, Hanne, Pontoppidan, S. P. & Klitgaard, J. K., 2022, In: Microbiological Research. 257, 126974.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Prevalence of antibiotic-resistant bacteria amongst dogs in Africa: A meta-analysis review

    Yaovi, A. B., Sessou, P., Tonouhewa, A. B. N., Hounmanou, G. Y. M., Thomson, D., Pelle, R., Farougou, S. & Mitra, A., 2022, In: Onderstepoort Journal of Veterinary Research. 89, 1, a1970.

    Research output: Contribution to journal › Review › Research › peer-review

  27. 2021
  28. Published

    Editorial: Bridging Science and Policy for Surveillance, Economics and Social Sciences: ICAHS and ISESSAH 2020

    Alban, L., Sauter-Louis, C., Brookes, V. J., Bartels, C. J. M., Vosough Ahmadi, B., Rushton, J. & Dürr, S., 2021, In: Frontiers in Veterinary Science. 8, 790248.

    Research output: Contribution to journal › Editorial › Research › peer-review

  29. Published

    Modernising meat inspection of pigs – A review of the Danish process from 2006-2020

    Alban, L., Petersen, J. V., Bækbo, A. K., Pedersen, T. Ø., Kruse, Amanda Brinch, Pacheco, G. & Larsen, M. H., 2021, In: Food Control. 119, 107450.

    Research output: Contribution to journal › Review › Research › peer-review

  30. Published

    Potential of novel cadaverine biosensor technology to predict shelf life of chilled yellowfin tuna (Thunnus albacares)

    Alexi, N., Hvam, J., Lund, B. W., Nsubuga, L., de Oliveira Hansen, R. M., Thamsborg, K., Lofink, F., Byrne, D. V. & Leisner, Jørgen, 2021, In: Food Control. 119, 107458.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Staphylococcal ClpXP protease targets the cellular antioxidant system to eliminate fitness-compromised cells in stationary phase

    Alqarzaee, A. A., Chaudhari, S. S., Islam, M. M., Kumar, V., Zimmerman, M. C., Saha, R., Bayles, K. W., Frees, Dorte & Thomas, V. C., 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 47, e2109671118.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Learning From Mistakes: The Role of Phages in Pandemics

    Alsaadi, Ahlam Musaibeh M, Beamud, B., Easwaran, M., Abdelrahman, F., El-Shibiny, A., Alghoribi, M. F. & Domingo-Calap, P., 2021, In: Frontiers in Microbiology. 12, 653107.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Risk of hospitalisation associated with infection with SARS-CoV-2 lineage B.1.1.7 in Denmark: an observational cohort study

    Bager, P., Wohlfahrt, J., Fonager, J., Rasmussen, M., Albertsen, M., Michaelsen, T. Y., Møller, C. H., Ethelberg, Steen, Legarth, R., Button, M. S. F., Gubbels, S., Voldstedlund, M., Mølbak, Kåre, Skov, R. L., Fomsgaard, A., Krause, T. G. & The Danish Covid-19 Genome Consortium, T. D. C. G. C., 2021, In: The Lancet Infectious Diseases. 21, 11, p. 1507-1517 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Drivers, opportunities, and challenges of the European risk-based meat safety assurance system

    Blagojevic, B., Nesbakken, T., Alvseike, O., Vågsholm, I., Antic, D., Johler, S., Houf, K., Meemken, D., Nastasijevic, I., Vieira Pinto, M., Antunovic, B., Georgiev, M. & Alban, L., 2021, In: Food Control. 124, 12 p., 107870.

    Research output: Contribution to journal › Review › Research › peer-review

  35. Published

    Dabigatran and the Risk of Staphylococcus aureus Bacteremia: A Nationwide Cohort Study

    Butt, J. H., Fosbøl, E. L., Verhamme, P., Gerds, Thomas Alexander, Iversen, Kasper, Bundgård, Henning, Bruun, Niels Eske, Larsen, A. R., Petersen, A., Andersen, P. S., Skov, R. L., Gislason, Gunnar Hilmar, Torp-Pedersen, Christian, Køber, Lars Valeur & Olesen, J. B., 2021, In: Clinical infectious diseases : an official publication of the Infectious Diseases Society of America. 73, 3, p. 480-486 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    A Staphylococcus aureus clpX Mutant Used as a Unique Screening Tool to Identify Cell Wall Synthesis Inhibitors that Reverse β-Lactam Resistance in MRSA

    Bæk, K. T., Jensen, C., Farha, M. A., Nielsen, T. K., Paknejadi, E., Mebus, Viktor Hundtofte, Vestergaard, M., Brown, E. D. & Frees, Dorte, 2021, In: Frontiers in Molecular Biosciences. 8, 691569.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Moving objects by imagination? Amount of finger movement and pendulum length determine success in the Chevreul pendulum illusion

    Cantergi, D., Awasthi, B. & Friedman, J., 2021, In: Human Movement Science. 80, 9 p., 102879.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Identification of cutaneous fungi and mites in adult atopic dermatitis: analysis by targeted 18S rRNA amplicon sequencing

    Edslev, S. M., Andersen, P. S., Agner, Tove, Saunte, Ditte Marie, Ingham, A. C., Johannesen, T. B. & Clausen, M. L., 2021, In: BMC Microbiology. 21, 1, 8 p., 72.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Staphylococcal communities on skin are associated with atopic dermatitis and disease severity.

    Edslev, S. M., Olesen, C. M., Nørreslet, L. B., Ingham, A. C., Iversen, S., Lilje, B., Clausen, M. L., Jensen, J. S., Stegger, M., Agner, Tove & Andersen, P. S., 2021, In: Microorganisms. 9, 2, p. 1-17 17 p., 432.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    Cefoxitin treatment of MRSA leads to a shift in the IL-12/IL-23 production pattern in dendritic cells by a mechanism involving changes in the MAPK signaling

    Eld, H. M. S., Nielsen, E. M., Johnsen, Peter Riber, Marengo, M., Kamper, I. W., Frederiksen, L., Bonomi, F., Frees, Dorte, Iametti, S. & Frøkiær, Hanne, 2021, In: Molecular Immunology. 134, p. 1-12 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Diet-Dependent Changes of the DNA Methylome Using a Göttingen Minipig Model for Obesity

    Feng, Y., Cirera, Susanna, Taşöz, E., Liu, Y., Olsen, Lisbeth Høier, Christoffersen, B. Ø., Pedersen, H. D., Ludvigsen, T. P., Kirk, R. K., Schumacher-Petersen, Camilla, Deng, Y., Fredholm, Merete & Gao, Fei, 2021, In: Frontiers in Genetics. 12, 632859.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Looking into the future of phage-based control of zoonotic pathogens in food and animal production

    Gambino, Michela & Brøndsted, Lone, 2021, In: Current Opinion in Biotechnology. 68, p. 96-103 8 p.

    Research output: Contribution to journal › Review › Research › peer-review

  43. Published

    The tombstones at the Monumental Cemetery of Milano select for a specialized microbial community

    Gambino, Michela, Lepri, G., Štovícek, A., Ghazayarn, L., Villa, F., Gillor, O. & Cappitelli, F., 2021, In: International Biodeterioration and Biodegradation. 164, 105298.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Rearrangement of Thiodepsipeptides by S → N Acyl Shift Delivers Homodetic Autoinducing Peptides

    Gless, B. H., Bejder, Benjamin Svejdal, Monda, F., Bojer, Martin Saxtorph, Ingmer, Hanne & Olsen, Christian Adam, 2021, In: Journal of the American Chemical Society. 143, 28, p. 10514–10518

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Assessment of protection against reinfection with SARS-CoV-2 among 4 million PCR-tested individuals in Denmark in 2020: a population-level observational study

    Hansen, C. H., Michlmayr, D., Gubbels, S. M., Mølbak, Kåre & Ethelberg, Steen, 2021, In: Lancet. 397, 10280, p. 1204-1212 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    ESBL and AmpC β-Lactamase Encoding Genes in E. coli From Pig and Pig Farm Workers in Vietnam and Their Association With Mobile Genetic Elements

    Hounmanou, Yaovi Mahuton Gildas, Bortolaia, V., Dang, S. T. T., Truong, D., Olsen, John Elmerdahl & Dalsgaard, Anders, 2021, In: Frontiers in Microbiology. 12, 14 p., 629139.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Human papillomavirus vaccination and all-cause morbidity in adolescent girls: a cohort study of absence from school due to illness

    Hviid, A., Thorsen, N. M., Thomsen, L. N., Møller, F. T., Wiwe, A., Frisch, M., Valentiner-Branth, P., Rytter, D. & Mølbak, Kåre, 2021, In: International Journal of Epidemiology. 50, 2, p. 518-526 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Proton-Pump Inhibitor Use and the Risk of Community-Associated Clostridium difficile Infection

    Inghammar, M., Svanström, H., Voldstedlund, M., Melbye, M., Hviid, A., Mølbak, Kåre & Pasternak, B., 2021, In: Clinical infectious diseases : an official publication of the Infectious Diseases Society of America. 72, 12, p. e1084–e1089

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Association between antimicrobial usage and resistance in Salmonella from poultry farms in Nigeria

    Jibril, A. H., Okeke, I. N., Dalsgaard, Anders & Olsen, John Elmerdahl, 2021, In: BMC Veterinary Research. 17, 234.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Genomic analysis of antimicrobial resistance and resistance plasmids in salmonella serovars from poultry in Nigeria

    Jibril, A. H., Okeke, I. N., Dalsgaard, Anders, Menéndez, V. G. & Olsen, John Elmerdahl, 2021, In: Antibiotics. 10, 2, p. 1-22 22 p., 99.

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    Quantification of antibiotic resistance genes in wildlife ungulates in Ngorongoro Conservation area and Mikumi National Park, Tanzania

    Katakweba, A. A. S. & Olsen, J. E., 2021, In: Tanzania Veterinary Journal. 36, 2, p. 1-10

    Research output: Contribution to journal › Journal article › Research › peer-review

  52. Published

    Assessing the value of bacteriological examination as a diagnostic tool in relation to meat inspection in cattle

    Kogka, E., Larsen, M. H., Poulsen, M. K., Petersen, J. V., Vester, C. T. & Alban, L., 2 Jan 2021, In: International Journal of Food Microbiology. 338, 108997.

    Research output: Contribution to journal › Journal article › Research › peer-review

  53. Published

    The Incidence, Intensity, and Risk Factors for Soil Transmissible Helminthes Infections among Waste Handlers in a Large Coastal Periurban Settlement in Southern Ghana

    Kretchy, J. P., Dzodzomenyo, M., Ayi, I., Dwomoh, D., Agyabeng, K., Konradsen, Flemming & Dalsgaard, Anders, 2021, In: Journal of Environmental and Public Health. 2021, 12 p., 5205793.

    Research output: Contribution to journal › Journal article › Research › peer-review

  54. Published

    Characterization of the genetic switch from phage ɸ13 important for Staphylococcus aureus colonization in humans

    Kristensen, C. S., Varming, A. K., Leinweber, H. A. K., Hammer, K., Lo Leggio, Leila, Ingmer, Hanne & Kilstrup, M., 1 Oct 2021, In: MicrobiologyOpen. 10, 5, 22 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  55. Published

    Preliminary report of an outbreak of SARS-CoV-2 in mink and mink farmers associated with community spread, Denmark, June to November 2020

    Larsen, H. D., Fonager, J., Lomholt, F. K., Dalby, T., Benedetti, G., Kristensen, B., Urth, T. R., Rasmussen, M., Lassaunière, R., Rasmussen, T. B., Strandbygaard, B., Lohse, L., Chaine, M., Møller, K. L., Berthelsen, A. S. N., Nørgaard, S. K., Sönksen, U. W., Boklund, A. E., Hammer, A. S., Belsham, G. J. & 5 others, Krause, Tyra Grove, Mortensen, S., Bøtner, A., Fomsgaard, A. & Mølbak, Kåre, 2021, In: Eurosurveillance. 26, 5, 6 p.

    Research output: Contribution to journal › Review › Research › peer-review

  56. Published

    In vitro Characterization of Fitness and Convalescent Antibody Neutralization of SARS-CoV-2 Cluster 5 Variant Emerging in Mink at Danish Farms

    Lassaunière, R., Fonager, J., Rasmussen, M., Frische, A., Polacek, C., Rasmussen, T. B., Lohse, L., Belsham, Graham John, Underwood, Alexander Paul James, Winckelmann, A. A., Bollerup, S., Bukh, Jens, Weis, Nina, Sækmose, S. G., Aagaard, B., Alfaro-Núñez, A., Mølbak, Kåre, Bøtner, A. & Fomsgaard, A., 2021, In: Frontiers in Microbiology. 12, 9 p., 698944.

    Research output: Contribution to journal › Journal article › Research › peer-review

  57. Published

    Large-Scale Staphylococcus aureus Foodborne Disease Poisoning Outbreak among Primary School Children

    Le, H. H. T., Dalsgaard, Anders, Andersen, P. S., Nguyen, H. M., Ta, Y. T. & Nguyen, T. T., 2021, In: Microbiology Research. 12, p. 43-52

    Research output: Contribution to journal › Journal article › Research › peer-review

  58. Published

    Exploration of the Diversity of Clustered Regularly Interspaced Short Palindromic Repeats-Cas Systems in Clostridium novyi sensu lato

    Le Gratiet, T., Le Marechal, C., Devaere, M., Chemaly, M. & Woudstra, Cedric Folkert Julien, 2021, In: Frontiers in Microbiology. 12, 17 p., 711413.

    Research output: Contribution to journal › Journal article › Research › peer-review

  59. Published

    Staphylococcal Phages Adapt to New Hosts by Extensive Attachment Site Variability

    Leinweber, H., Sieber, R. N., Larsen, J., Stegger, M. & Ingmer, Hanne, 2021, In: mBio. 12, 6, e02259-21.

    Research output: Contribution to journal › Journal article › Research › peer-review

  60. Published

    Characterization of antimicrobial-resistant Staphylococcus aureus from retail foods in Beijing, China

    Li, H., Tang, Taya, Stegger, M., Dalsgaard, Anders, Liu, T. & Leisner, Jørgen, 2021, In: Food Microbiology. 93, 103603.

    Research output: Contribution to journal › Journal article › Research › peer-review

  61. Published

    Identification of Potential Citrate Metabolism Pathways in Carnobacterium maltaromaticum

    Li, H., Ramia, N. E., Borges, F., Revol-Junelles, A., Vogensen, Finn Kvist & Leisner, Jørgen, 2021, In: Microorganisms. 9, 10, 2169.

    Research output: Contribution to journal › Journal article › Research › peer-review

  62. Published

    Genome-wide identification of resveratrol intrinsic resistance determinants in staphylococcus aureus

    Liu, L., Ingmer, Hanne & Vestergaard, M., 2021, In: Antibiotics. 10, 1, p. 1-9 9 p., 82.

    Research output: Contribution to journal › Journal article › Research › peer-review

  63. Published

    Free-living birds from Caatinga and Atlantic Forest of northeast Brazil as hosts of Enterobacterales, Mycoplasma spp., and Chlamydia psittaci

    Lugarini, C., Silva, L. T. R., de Amorim, M. M. R., de Lima, D. C. V., Santos, S. B., Becker Simoes Saidenberg, André, Raso, T. F., Mota, R. A. & Silva, J. C. R., 2021, In: Ornithology Research. 29, p. 149–159

    Research output: Contribution to journal › Journal article › Research › peer-review

  64. Published

    Association between SARS-CoV-2 Transmissibility, Viral Load, and Age in Households

    Lyngse, Frederik Plesner, Mølbak, Kåre, Franck, K. T., Nielsen, C., Skov, R. L., Voldstedlund, M., Cohen, A. S. & Kirkeby, Carsten, 5 Mar 2021.

    Research output: Working paper › Preprint › Research

  65. Published

    COVID-19 Transmission Within Danish Households: A Nationwide Study from Lockdown to Reopening

    Lyngse, Frederik Plesner, Kirkeby, Carsten, Halasa, T., Andreasen, V., Skov, R. L., Møller, F. T., Krause, Tyra Grove & Mølbak, Kåre, 2021, 36 p. (Eurosurveillance).

    Research output: Working paper › Preprint › Research

  66. Published

    Increased transmissibility of SARS-CoV-2 lineage B.1.1.7 by age and viral load

    Lyngse, Frederik Plesner, Mølbak, Kåre, Skov, R. L., Christiansen, L. E., Mortensen, Laust Hvas, Albertsen, M., Møller, C. H., Krause, Tyra Grove, Rasmussen, M., Michaelsen, T. Y., Voldstedlund, M., Fonager, J., Steenhard, N., Kirkeby, Carsten & Danish Covid-19 Genome Consortium, D. C. G. C., 2021, In: Nature Communications. 12, 8 p., 7251.

    Research output: Contribution to journal › Journal article › Research › peer-review

  67. Published

    Magnetic nanomaterials as biocatalyst carriers for biomass processing: Immobilization strategies, reusability, and applications

    Mariño, M. A., Fulaz Silva, Stephanie & Tasic, L., 2021, In: Magnetochemistry. 7, 10, 22 p., 133.

    Research output: Contribution to journal › Review › Research › peer-review

  68. Published

    The Novel Membrane-Associated Auxiliary Factors AuxA and AuxB Modulate β-lactam Resistance in MRSA by stabilizing Lipoteichoic Acids

    Mikkelsen, K., Sirisarn, W., Alharbi, O., Alharbi, M., Liu, H., Nøhr-Meldgaard, K., Mayer, K., Vestergaard, M., Gallagher, L. A., Derrick, J. P., McBain, A. J., Biboy, J., Vollmer, W., O'Gara, J. P., Grunert, T., Ingmer, Hanne & Xia, G., 2021, In: International Journal of Antimicrobial Agents. 57, 3, 106283.

    Research output: Contribution to journal › Journal article › Research › peer-review

  69. Published

    Anti-staphylococcal effects of Myracrodruon urundeuva lectins on nonresistant and multidrug resistant isolates

    Moura, M. C., Procópio, T. F., Ferreira, G. R. S., Alves, R. R. V., Sá, R. A., Paiva, P. M. G., Ingmer, Hanne, Coelho, L. C. B. B. & Napoleão, T. H., 2021, In: Journal of Applied Microbiology. 130, 3, p. 745-754

    Research output: Contribution to journal › Journal article › Research › peer-review

  70. Published

    Sex-differences in COVID-19 associated excess mortality is not exceptional for the COVID-19 pandemic

    Nielsen, J., Nørgaard, S. K., Lanzieri, G., Vestergaard, L. S. & Mølbak, Kåre, 2021, In: Scientific Reports. 11, 9 p., 20815.

    Research output: Contribution to journal › Journal article › Research › peer-review

  71. Published

    Adverse SARS-CoV-2 Associated Outcomes Among People Experiencing Homelessness, Imprisonment, Supported Psychiatric Housing, Mental Disorders, Substance Abuse or Chronic Medical Disorders: A Population-Based Cohort Study Among 4.4 Million People

    Nilsson, S., Laursen, T. M., Osler, Merete, Hjorthøj, Carsten, Benros, Michael Eriksen, Ethelberg, Steen, Mølbak, Kåre & Nordentoft, Merete, 2021, SSRN: Social Science Research Network.

    Research output: Working paper › Preprint › Research

  72. Published

    The Tetracycline Resistance Gene, tet(W) in Bifidobacterium animalis subsp. lactis Follows Phylogeny and Differs From tet(W) in Other Species

    Nøhr-Meldgaard, K., Struve, C., Ingmer, Hanne & Agersø, Marie Yvonne Feraren, 2021, In: Frontiers in Microbiology. 12, 658943.

    Research output: Contribution to journal › Journal article › Research › peer-review

  73. Published

    Wearing occlusive gloves increases the density of staphylococcus aureus in patients with hand eczema

    Nørreslet, L. B., Edslev, S. M., Flachs, E. M., Ebbehøj, N. E., Andersen, P. S. & Agner, Tove, 2021, In: Acta Dermato-Venereologica. 101, 8, adv00515.

    Research output: Contribution to journal › Journal article › Research › peer-review

  74. Published

    A longitudinal study of Toxoplasma gondii seroconversion on four large Danish sow farms

    Olsen, Abbey , Alban, L., Denwood, Matt, Houe, Hans, Birk Jensen, T. & Vedel Nielsen, H., 2021, In: Veterinary Parasitology. 295, 9 p., 109460.

    Research output: Contribution to journal › Journal article › Research › peer-review

  75. Published

    Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Infection Fatality Rate among Elderly Danes: A Cross-sectional Study on Retired Blood Donors

    Pedersen, O. B., Nissen, J., Dinh, K. M., Schwinn, M., Kaspersen, K. A., Boldsen, J. K., Didriksen, M., Dowsett, J., Sørensen, E., Thørner, L. W., Larsen, M. A. H., Grum-Schwensen, B., Sækmose, S., Paulsen, I. W., Frisk, N. L. S., Brodersen, T., Vestergaard, L. S., Rostgaard, K., Mølbak, K., Skov, R. L. & 3 others, Erikstrup, C., Ullum, H. & Hjalgrim, Henrik, 2021, In: Clinical Infectious Diseases. 73, 9, p. E2962-E2969

    Research output: Contribution to journal › Journal article › Research › peer-review

  76. Published

    Co-occurrence of antimicrobial and metal resistance genes in pig feces and agricultural fields fertilized with slurry

    Peng, S., Zheng, H., Herrero-Fresno, A., Olsen, John Elmerdahl, Dalsgaard, Anders & Ding, Z., 2021, In: Science of the Total Environment. 792, 148259.

    Research output: Contribution to journal › Journal article › Research › peer-review

  77. Published

    Inactivation of Cryptosporidium parvum oocysts and faecal indicator bacteria in cattle slurry by addition of ammonia

    Petersen, H. H., Dalsgaard, Anders, Vinneras, B., Jensen, Lars Stoumann, Le, T. T. A., Petersen, M. A., Enemark, H. L. & Forslund, A., 2021, In: Journal of Applied Microbiology. 130, 5, p. 1745-1757

    Research output: Contribution to journal › Journal article › Research › peer-review

  78. Published

    Biofilms can act as plasmid reserves in the absence of plasmid specific selection

    Røder, Henriette Lyng, Trivedi, Urvish, Russel, J., Kragh, K. N., Herschend, J., Thalsø-Madsen, I., Tolker-Nielsen, Tim, Bjarnsholt, Thomas, Burmølle, Mette & Madsen, Jonas Stenløkke, 2021, In: npj Biofilms and Microbiomes. 7, 6 p., 78.

    Research output: Contribution to journal › Letter › Research › peer-review

  79. Published

    Assessment of Evaluation Tools for Integrated Surveillance of Antimicrobial Use and Resistance Based on Selected Case Studies

    Sandberg, M., Hesp, A., Aenishaenslin, C., Bordier, M., Bennani, H., Bergwerff, U., Chantziaras, I., De Meneghi, D., Ellis-Iversen, J., Filippizi, M. E., Mintiens, K., Nielsen, Liza Rosenbaum, Norström, M., Tomassone, L., van Schaik, G. & Alban, L., 2021, In: Frontiers in Veterinary Science. 8, 13 p., 620998.

    Research output: Contribution to journal › Journal article › Research › peer-review

  80. Published

    Electronic reporting of diagnostic laboratory test results from all healthcare sectors is a cornerstone of national preparedness and control of COVID-19 in Denmark

    Schønning, Kristian, Dessau, R. B., Jensen, T. G., Thorsen, N. M., Wiuff, C., Nielsen, L., Gubbels, S., Denwood, Matt, Thygesen, U. H., Christensen, L. E., Møller, C. H., Møller, J. K., Ellermann-Eriksen, S., Østergaard, C., Lam, J. U. H., Abushalleeh, N., Meaidi, M., Olsen, S., Mølbak, Kåre & Voldstedlund, M., 2021, In: APMIS. 129, 7, p. 438-451

    Research output: Contribution to journal › Journal article › Research › peer-review

  81. Published

    Antibacterial effects of the lectin from pomegranate sarcotesta (PgTeL) against Listeria monocytogenes

    Silva, P. M., Silva, J. N. O., Silva, B. R., Ferreira, G. R. S., Gaião, W. D. C., Recio, M. V., Gonçalves, G. G. A., Rodrigues, C. G., Medeiros, P. L., Brayner, F. A., Alves, L. C., Larsen, M. H., Ingmer, Hanne, Napoleão, T. H. & Paiva, P. M. G., 2021, In: Journal of Applied Microbiology. 131, 2, p. 671-681

    Research output: Contribution to journal › Journal article › Research › peer-review

  82. Published

    Subtypes of tail spike proteins predicts the host range of Ackermannviridae phages

    Sørensen, Anders Nørgaard, Woudstra, Cedric Folkert Julien, Sørensen, Martine Camilla Holst & Brøndsted, Lone, 2021, In: Computational and Structural Biotechnology Journal. 19, p. 4854-4867 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  83. Published

    Identification of Novel Phage Resistance Mechanisms in Campylobacter jejuni by Comparative Genomics

    Sørensen, Martine Camilla Holst, Gencay, Y. E., Fanger, F., Chichkova, M. A. T., Mazúrová, M., Klumpp, J., Nielsen, E. M. & Brøndsted, Lone, 2021, In: Frontiers in Microbiology. 12, 780559.

    Research output: Contribution to journal › Journal article › Research › peer-review

  84. Published

    Campylobacter phages use hypermutable polyG tracts to create phenotypic diversity and evade bacterial resistance

    Sørensen, Martine Camilla Holst, Vitt, Amira Ruslanovna, Neve, H., Soverini, M., Ahern, S. J., Klumpp, J. & Brøndsted, Lone, 2021, In: Cell Reports. 35, 10, 20 p., 109214.

    Research output: Contribution to journal › Journal article › Research › peer-review

  85. Published

    Classification of in vitro phage–host population growth dynamics

    Sørensen, P. E., Ng, D. Y. K., Duchateau, L., Ingmer, Hanne, Garmyn, A. & Butaye, P., 2021, In: Microorganisms. 9, 12, 2470.

    Research output: Contribution to journal › Journal article › Research › peer-review

  86. Published

    Spontaneous Phage Resistance in Avian Pathogenic Escherichia coli

    Sørensen, P. E., Baig, S., Stegger, M., Ingmer, Hanne, Garmyn, A. & Butaye, P., 2021, In: Frontiers in Microbiology. 12, 782757.

    Research output: Contribution to journal › Journal article › Research › peer-review

  87. Published

    The prevalence of staphylococcus aureus and the occurrence of mrsa cc398 in monkey feces in a zoo park in eastern China

    Tang, Y., Qiao, Z., Wang, Z., Li, Y., Ren, J., Wen, L., Xu, X., Yang, J., Yu, C., Meng, C., Ingmer, Hanne, Li, Q. & Jiao, X., 2021, In: Animals. 11, 3, p. 1-8 8 p., 732.

    Research output: Contribution to journal › Journal article › Research › peer-review

  88. Published

    To pray in four directions: Understanding Vietnamese farmers' shrimp health management practices

    Tran, K. C., Dalsgaard, Anders, Van, P. T. & Tersbøl, Britt Pinkowski, 2021, In: Aquaculture. 536, 736406.

    Research output: Contribution to journal › Journal article › Research › peer-review

  89. Published

    Genetic Comparison of ESBL-Producing Escherichia coli from Workers and Pigs at Vietnamese Pig Farms

    Truong, D. T. Q., Hounmanou, Yaovi Mahuton Gildas, Dang, S. T. T., Olsen, John Elmerdahl, Truong, G. T. H., Tran, N. T., Scheutz, F. & Dalsgaard, Anders, 2021, In: Antibiotics. 10, 10, 1165.

    Research output: Contribution to journal › Journal article › Research › peer-review

  90. Published

    Peptide/β-Peptoid Hybrids with Activity against Vancomycin-Resistant Enterococci: Influence of Hydrophobicity and Structural Features on Antibacterial and Hemolytic Properties

    Vestergaard, M., Skive, Bolette, Domraceva, I., Ingmer, Hanne & Franzyk, Henrik, 2021, In: International Journal of Molecular Sciences. 22, 11, 5617.

    Research output: Contribution to journal › Journal article › Research › peer-review

  91. Published

    Targeting the ATP synthase in Staphylococcus aureus small colony variants, Streptococcus pyogenes and pathogenic fungi

    Vestergaard, M., Roshanak, S. & Ingmer, Hanne, 2021, In: Antibiotics. 10, 4, 376.

    Research output: Contribution to journal › Journal article › Research › peer-review

  92. Published

    Functional Characterization of Type III-A CRISPR-Cas in a Clinical Human Methicillin-R Staphylococcus aureus Strain

    Yang, L., Mikkelsen, K., Grané, O. L. I., Wang, Z., Tang, Y., Jiao, X., Ingmer, Hanne, Høyland-Kroghsbo, Nina Molin & Li, Q., 2021, In: CRISPR Journal. 4, 5, p. 686-698

    Research output: Contribution to journal › Journal article › Research › peer-review

  93. Published

    Developing Innolysins Against Campylobacter jejuni Using a Novel Prophage Receptor-Binding Protein

    Zampara, A., Sørensen, Martine Camilla Holst, Gencay, Y. E., Grimon, D., Kristiansen, S. H., Jørgensen, L. S., Kristensen, J. R., Briers, Y., Elsser-Gravesen, A. & Brøndsted, Lone, 2021, In: Frontiers in Microbiology. 12, 619028.

    Research output: Contribution to journal › Journal article › Research › peer-review

  94. 2020
  95. Published

    Risk-based surveillance for meat-borne parasites

    Alban, L., Häsler, B., van Schaik, G. & Ruegg, S., 2020, In: Experimental Parasitology. 208, 107808.

    Research output: Contribution to journal › Review › Research › peer-review

  96. Published

    Er en bakteriologisk undersøgelse af slagtekrop og organer brugbar i forbindelse med kødkontrol?

    Alban, L. M., Kogka, E., Larsen, M. H., Petersen, J. V., Vester, C. H. & Poulsen, M. K., 2020, In: Dansk Veterinaertidsskrift. 2020, 08, p. 22-28

    Research output: Contribution to journal › Journal article › Research › peer-review

  97. Published

    The association between meat inspection codes, footpad lesions and thinning of broiler flocks in the Danish broiler production

    Alfifi, Ahmed Eassa H, Dalsgaard, Anders, Christensen, Jens Peter, Larsen, M. H. & Sandberg, M., 2020, In: Preventive Veterinary Medicine. 185, 105205.

    Research output: Contribution to journal › Journal article › Research › peer-review

  98. Published

    Health risks of toxic metals (Al, Fe and Pb) in two common street vended foods, fufu and fried-rice, in Kumasi, Ghana

    Ankar-Brewoo, G. M., Darko, G., Abaidoo, R. C., Dalsgaard, Anders, Johnson, P. N., Ellis, W. O. & Brimer, L., 2020, In: Scientific African. 7, 9 p., e00289.

    Research output: Contribution to journal › Journal article › Research › peer-review

  99. Published

    eHealth: Disease activity measures are related to the faecal gut microbiota in adult patients with ulcerative colitis

    Ankersen, D. V., Weimers, P., Marker, D., Johannesen, T., Iversen, S., Lilje, B., Kristoffersen, A. B., Saboori, S., Paridaens, K., Skytt Andersen, P., Burisch, J. & Munkholm, Pia, 2020, In: Scandinavian Journal of Gastroenterology. 55, 11, p. 1291-1300

    Research output: Contribution to journal › Journal article › Research › peer-review

  100. Published

    Design and characterization of a novel tool for the antigenic enrichment of actinobacillus pleuropneumoniae outer membrane

    Antenucci, F., Ovsepian, A., Wrobel, A., Winther-Larsen, H. C. & Bojesen, Anders Miki, 2020, In: Pathogens. 9, 12, p. 1-13 13 p., 1014.

    Research output: Contribution to journal › Journal article › Research › peer-review

  101. Published

    Distribution of salmonella serovars in humans, foods, farm animals and environment, companion and wildlife animals in Singapore

    Aung, K. T., Khor, W. C., Octavia, S., Ye, A., Leo, J., Chan, P. P., Lim, G., Wong, W. K., Tan, B. Z. Y., Schlundt, J., Dalsgaard, Anders, Ng, L. C. & Lin, Y. N., 2020, In: International Journal of Environmental Research and Public Health. 17, 16, p. 1-13 13 p., 5774.

    Research output: Contribution to journal › Journal article › Research › peer-review

  102. Published

    Evolution and Population Dynamics of Clonal Complex 152 Community-Associated Methicillin-Resistant Staphylococcus aureus

    Baig, S., Rhod Larsen, A., Martins Simões, P., Laurent, F., Johannesen, T. B., Lilje, B., Tristan, A., Schaumburg, F., Egyir, B., Cirkovic, I., Nimmo, G. R., Spiliopoulou, I., Blanc, D. S., Mernelius, S., Moen, A. E. F., David, M. Z., Andersen, P. S. & Stegger, M., 2020, In: mSphere. 5, 4, 9 p., e00226-20 .

    Research output: Contribution to journal › Journal article › Research › peer-review

  103. Published

    Phenol-Soluble Modulins Modulate Persister Cell Formation in Staphylococcus aureus

    Baldry, M., Bojer, Martin Saxtorph, Najarzadeh, Z., Vestergaard, M., Meyer, R. L., Otzen, D. E. & Ingmer, Hanne, 2020, In: Frontiers in Microbiology. 11, p. 573253

    Research output: Contribution to journal › Journal article › Research › peer-review

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