Food Safety and Zoonoses

  1. 2023
  2. Published

    Evolutionary history of Staphylococcus aureus influences antibiotic resistance evolution

    Fait, A., Andersson, D. I. & Ingmer, Hanne, 2023, In: Current Biology. 33, 16, p. 3389-3397.e5

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    Fluoroquinolone resistance does not facilitate phage Φ13 integration or excision in Staphylococcus aureus

    Leinweber, H., Sieber, R. N., Bojer, Martin Saxtorph, Larsen, J. & Ingmer, Hanne, 2023, In: Access microbiology. 5, 6, 19 p., 000583.v4.

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. Published

    Full-scale industrial phage trial targeting Salmonella on pork carcasses

    Volpi, M., Gambino, Michela, Kirkeby, K., Elsser-Gravesen, A. & Brøndsted, Lone, 2023, In: Food Microbiology. 112, 104240.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. Published

    Förster Resonance Energy Transfer Assay for Investigating the Reactivity of Thioesters in Biochemistry and Native Chemical Ligation

    Gless, B. H., Schmied, S. H., Bejder, Benjamin Svejdal & Olsen, Christian Adam, 2023, In: JACS Au. 3, 5, p. 1443–1451

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Published

    Genomic Microevolution of Vibrio cholerae O1, Lake Tanganyika Basin, Africa

    Hounmanou, Yaovi Mahuton Gildas, Njamkepo, E., Rauzier, J., Gallandat, K., Jeandron, A., Kamwiziku, G., Porten, K., Luquero, F., Abedi, A. A., Rumedeka, B. B., Miwanda, B., Michael, M., Okitayemba, P. W., Saidi, J. M., Piarroux, R., Weill, F. X., Dalsgaard, Anders & Quilici, M. L., 2023, In: Emerging Infectious Diseases . 29, 1, p. 149-153 5 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. Published

    Genomic traits of Aeromonas veronii isolated from slaughtered Danish broilers

    Erickson, Vera Irene, Alfifi, Ahmed Eassa H, Hounmanou, Yaovi Mahuton Gildas, Sana, M. J., Christensen, Jens Peter & Dalsgaard, Anders, 2023, In: Veterinary Microbiology. 283, 109772.

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. Published

    Health based animal and meat safety cooperative communities

    Vågsholm, I., Belluco, S., Bonardi, S., Hansen, F., Elias, T., Roasto, M., Gomes-Neves, E., Antunovic, B., Kautto, A. H., Alban, L. & Blagojevic, B., 2023, In: Food Control. 154, 110016.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    High Genetic Diversity of Carbapenem-Resistant Acinetobacter baumannii Isolates Recovered in Nigerian Hospitals in 2016 to 2020

    Odih, Erkison Ewomazino, Oaikhena, A. O., Underwood, A., Hounmanou, Yaovi Mahuton Gildas, Oduyebo, O. O., Fadeyi, A., Aboderin, A. O., Ogunleye, V. O., Argimón, S., Akpunonu, V. N., Oshun, P. O., Egwuenu, A., Okwor, T. J., Ihekweazu, C., Aanensen, D. M., Dalsgaard, Anders & Okeke, I. N., 2023, In: mSphere. 8, 3, e0009823.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    How problem based teaching in amultidisciplinary continuing educationclassroom can contribute to improvingprofessional skills

    Hounmanou, Yaovi Mahuton Gildas, 2023, Improving University Science Teaching and Learning: Pedagogical Projects 2023. University of Copenhagen, p. 337-346 (Improving University Science Teaching and Learning - Pedagogical Projects; No. 18).

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearch

  11. Published

    Influence of vaccination on adverse health outcomes after SARS-CoV-2 infection among individuals with alcohol use disorder: a population-based study

    Askgaard, G., Osler, Merete, Laursen, T. M., Hjorthøj, Carsten, Benros, Michael Eriksen, Ethelberg, Steen, Mølbak, Kåre, Nordentoft, Merete & Nilsson, S. F., 2023, In: Addiction. 118, 8, 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. Published

    Mapping ways of detecting and handling antimicrobial residues in pigs and pig meat in- and outside Europe

    Alban, L., Antunović, B., Belous, M., Bonardi, S., García-Gimeno, R. M., Jenson, I., Kautto, A. H., Majewski, M., Oorburg, D., Sakaridis, I., Sirbu, A., Vieira-Pinto, M., Vågsholm, I., Bērziņš, A. & Petersen, J. V., 2023, In: Food Control. 153, 10 p., 109899.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. Published

    Mitigating antimicrobial resistance (AMR) using implementation research: a development funder's approach

    Khurana, M. P., Essack, S., Zoubiane, G., Sreenivasan, N., Cordoba, G. C., Westwood, E., Dalsgaard, A., Mdegela, R. H., Mpundu, M., Scotini, R., Matondo, A. B., Mzula, A., Chanishvili, N., Gogebashvili, D., Beruashvili, M., Tsereteli, M., Sooronbaev, T., Kjærgaard, J., Bloch, J., Isaeva, E. & 12 others, Mainda, G., Muuka, G., Mudenda, N. B., Goma, F. Y., Chu, D., Chanda, D., Chirwa, U., Yamba, K., Kapolowe, K., Fwoloshi, S., Mwenge, L. & Skov, R., 2023, In: JAC-Antimicrobial Resistance. 5, 2, 10 p., 031.

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. Published

    NDM-1- and OXA-23-producing Acinetobacter baumannii in wastewater of a Nigerian hospital

    Odih, Erkison Ewomazino, Sunmonu, G. T., Okeke, I. N. & Dalsgaard, Anders, 2023, In: Microbiology Spectrum. 11, 6, 17 p., e02381-23.

    Research output: Contribution to journalJournal articleResearchpeer-review

  15. Published

    Patterns of testing in the extensive Danish national SARS-CoV-2 test set-up

    Gram, M. A., Steenhard, N., Cohen, A. S., Vangsted, A., Mølbak, Kåre, Jensen, T. G., Hansen, C. H. & Ethelberg, Steen, 2023, In: PLoS ONE. 18, 7, 14 p., e0281972.

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Published

    Persistent Symptoms and Sequelae After Severe Acute Respiratory Syndrome Coronavirus 2 Infection Not Requiring Hospitalization: Results From Testing Denmark, a Danish Cross-sectional Survey

    van Wijhe, M., Fogh, K., Ethelberg, S., Iversen, K. K., Nielsen, H., Østergaard, L., Andersen, B., Bundgaard, H., Jorgensen, C. S., Scharff, B. F. S. S., Ellermann-Eriksen, S., Johansen, I. S., Fomsgaard, A., Krause, T. G., Wiese, L., Fischer, T. K., Molbak, K., Benfield, T., Folke, F., Lippert, F. & 9 others, Ostrowski, Sisse Rye, Koch, A., Erikstrup, C., Vangsted, A., Sorensen, A. I. V., Ullum, H., Skov, R. L., Simonsen, L. & Nielsen, Susanne Dam, 2023, In: Open Forum Infectious Diseases. 10, 1, 10 p., 679.

    Research output: Contribution to journalJournal articleResearchpeer-review

  17. Published

    Pharmacokinetics and depletion of florfenicol in striped catfish Pangasianodon hypophthalmus after oral administration

    Pham, Q. V., Nguyen, Q. T., Devreese, M., Croubels, S., Dang, T. H. O., Dalsgaard, Anders, Maita, M. & Tran, M. P., 2023, In: Fisheries Science. 89, 3, p. 357-365 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  18. Published

    Pilot study of the productivity and Salmonella seroprevalence in pigs administered organic acids

    Roldan-Henao, M., Dalsgaard, Anders, Cardona-Castro, N., Restrepo-Rivera, L., Veloza-Angulo, L. C. & Alban, L., 2023, In: Frontiers in Veterinary Science. 10, 1123137.

    Research output: Contribution to journalJournal articleResearchpeer-review

  19. Published

    Polyether Ionophore Antibiotics Target Drug-Resistant Clinical Isolates, Persister Cells, and Biofilms

    Wollesen, M., Mikkelsen, K., Tvilum, M. S., Vestergaard, M., Wang, M., Meyer, R. L., Ingmer, Hanne, Poulsen, T. B. & Tørring, T., 2023, In: Microbiology Spectrum. 11, 4, 14 p., e0062523.

    Research output: Contribution to journalJournal articleResearchpeer-review

  20. Published

    Post-weaning diarrhea in pigs from a single Danish production herd was not associated with the pre-weaning fecal microbiota composition and diversity

    Rydal, Martin Peter, Gambino, Michela, Castro-Mejia, J. L., Poulsen, Louise Ladefoged, Jørgensen, Claus Bøttcher & Nielsen, Jens Peter, 2023, In: Frontiers in Microbiology. 14, 1108197.

    Research output: Contribution to journalJournal articleResearchpeer-review

  21. Published

    Presencia de Salmonella spp en plantas de beneficio porcícolas en Colombia: revisión sistemática y metaanálisis

    Carrascal-Camacho, A. K., Barrientos-Anzol, I., Sampedro, F., Rojas, F., Pérez, M., Dalsgaard, Anders, Pulido-Villamarín, A. A. & Camacho-Carrillo, M. A., 2023, In: Revista de Investigaciones Veterinarias del Peru. 34, 6, 10 p., e25111.

    Research output: Contribution to journalJournal articleResearchpeer-review

  22. Published

    Prevalence and whole genome phylogenetic analysis reveal genetic relatedness between antibiotic resistance Salmonella in hatchlings and older chickens from farms in Nigeria

    Jibril, A. H., Okeke, I. N., Dalsgaard, Anders & Olsen, John Elmerdahl, 2023, In: Poultry Science. 102, 3, 102427.

    Research output: Contribution to journalJournal articleResearchpeer-review

  23. Published

    Producing Tailocins from Phages Using Osmotic Shock and Benzalkonium Chloride

    Woudstra, Cedric Folkert Julien & Brøndsted, Lone, 2023, In: PHAGE: Therapy, Applications, and Research. 4, 3, p. 136-140 5 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  24. Published
  25. Published

    SWOT analysis of risk factors associated with introduction of African Swine Fever through vehicles returning after export of pigs

    Gao, Y., Nielsen, L. H., Boklund, Anette, de Jong, M. C. M. & Alban, L., 2023, In: Frontiers in Veterinary Science. 9, 1049940.

    Research output: Contribution to journalJournal articleResearchpeer-review

  26. Published

    Users’ perception of the OH-EpiCap evaluation tool based on its application to nine national antimicrobial resistance surveillance systems

    Moura, P., Collineau, L., Sandberg, M., Tomassone, L., De Meneghi, D., Norström, M., Bennani, H., Häsler, B., Colomb-Cotinat, M., Bourély, C., Filippitzi, M. E., Mediouni, S., Boriani, E., Asaduzzaman, M., Caniça, M., Aenishaenslin, C. & Alban, L., 2023, In: Frontiers in Public Health. 11, 1138645.

    Research output: Contribution to journalJournal articleResearchpeer-review

  27. Published

    Whole strains vs MGEs in short and longterm transmission of ESBL genes between healthcare and community settings in Uganda

    Hounmanou, Yaovi Mahuton Gildas, Wanyana, A., Alafi, S., Wabwire-mangen, F., Christensen, Henrik, Olsen, John Elmerdahl & Byarugaba, D. K., 2023, In: Scientific Reports. 13, 10229.

    Research output: Contribution to journalJournal articleResearchpeer-review

  28. 2022
  29. Published

    Transmission of SARS-CoV-2 Omicron VOC subvariants BA.1 and BA.2: Evidence from Danish Households

    Lyngse, Frederik Plesner, Kirkeby, Carsten, Denwood, Matt, Christiansen, L. E., Mølbak, Kåre, Møller, C. H., Skov, R. L., Krause, Tyra Grove, Rasmussen, M., Sieber, R. N., Johannesen, T. B., Lillebaek, Troels, Fonager, J., Fomsgaard, A., Møller, F. T., Stegger, M., Overvad, M., Spiess, K. & Mortensen, Laust Hvas, 30 Jan 2022, 2 p.

    Research output: Other contributionResearch

  30. Published

    Assessment of risk to humans related to Salmonella from bile on pig carcasses

    Alban, L., Poulsen, M. K., Petersen, J. V., Lindegaard, L. L., Meinert, L., Koch, A. G. & Møgelmose, V., Jan 2022, In: Food Control. 131, 10 p., 108415.

    Research output: Contribution to journalJournal articleResearchpeer-review

  31. Published

    Salmonella Salamae and S. Waycross isolated from Nile perch in Lake Victoria show limited human pathogenic potential

    Hounmanou, Yaovi Mahuton Gildas, Baniga, Z., García, V. & Dalsgaard, Anders, 2022, In: Scientific Reports. 12, 11 p., 4229.

    Research output: Contribution to journalJournal articleResearchpeer-review

  32. Published

    A European survey on post-mortem inspection of finishing pigs: Total condemnation criteria to declare meat unfit for human consumption

    Vieira-Pinto, M., Langkabel, N., Santos, S., Alban, L., Laguna, J. G., Blagojevic, B., Meemken, D., Bonardi, S., Antunović, B., Ghidini, S., Maurer, P., Alvseike, O. & Laukkanen-Ninios, R., 2022, In: Research in Veterinary Science. 152, p. 72-82 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  33. Published

    A bottom-up view of antimicrobial resistance transmission in developing countries

    Ikhimiukor, O. O., Odih, Erkison Ewomazino, Donado-Godoy, P. & Okeke, I. N., 2022, In: Nature Microbiology. 7, 6, p. 757-765 9 p.

    Research output: Contribution to journalReviewResearchpeer-review

  34. Published

    A porcine model of subcutaneous Staphylococcus aureus infection: a pilot study

    Nielsen, O. L., Mellergaard, M., Frees, Dorte, Larsen, M. N., Skov, Søren, Olsen, Lisbeth Høier & Reimann, Maria Josefine, 2022, In: APMIS - Journal of Pathology, Microbiology and Immunology. 130, 7, p. 359-370

    Research output: Contribution to journalJournal articleResearchpeer-review

  35. Published

    Adaptive laboratory evolution and independent component analysis disentangle complex vancomycin adaptation trajectories

    Fait, A., Seif, Y., Mikkelsen, K., Poudel, S., Wells, J. M., Palsson, B. O. & Ingmer, Hanne, 2022, In: Proceedings of the National Academy of Sciences of the United States of America. 119, 30, e2118262119.

    Research output: Contribution to journalJournal articleResearchpeer-review

  36. Published

    Additional post-mortem inspection procedures and laboratory methods as supplements for visual meat inspection of finishing pigs in Europe—Use and variability

    Laukkanen-Ninios, R., Ghidini, S., Gómez Laguna, J., Langkabel, N., Santos, S., Maurer, P., Meemken, D., Alban, L., Alvseike, O. & Vieira-Pinto, M., 2022, In: Journal fur Verbraucherschutz und Lebensmittelsicherheit. 17, p. 363–375

    Research output: Contribution to journalJournal articleResearchpeer-review

  37. Published

    Adverse SARS-CoV-2-associated outcomes among people experiencing social marginalisation and psychiatric vulnerability: A population-based cohort study among 4,4 million people

    Nilsson, S. F., Laursen, T. M., Osler, Merete, Hjorthøj, Carsten, Benros, Michael Eriksen, Ethelberg, Steen, Mølbak, Kåre & Nordentoft, Merete, 2022, In: The Lancet Regional Health - Europe. 15 p., 100421.

    Research output: Contribution to journalJournal articleResearchpeer-review

  38. Published

    Characterisation of Salmonella enteritidis ST11 and ST1925 Associated with Human Intestinal and Extra-Intestinal Infections in Singapore

    Aung, K. T., Khor, W. C., Ong, K. H., Tan, W. L., Wong, Z. N., Oh, J. Q., Wong, W. K., Tan, B. Z. Y., Maiwald, M., Tee, N. W. S., Barkham, T., Koh, T. H., Dalsgaard, Anders, Chen, S. L., Schlundt, J. & Ng, L. C., 2022, In: International Journal of Environmental Research and Public Health. 19, 9, 5671.

    Research output: Contribution to journalJournal articleResearchpeer-review

  39. Published

    Characterization of Escherichia coli and other bacteria isolated from condemned broilers at a Danish abattoir

    Alfifi, Ahmed Eassa H, Christensen, Jens Peter, Hounmanou, Yaovi Mahuton Gildas, Sandberg, M. & Dalsgaard, Anders, 2022, In: Frontiers in Microbiology. 13, 13 p., 1020586.

    Research output: Contribution to journalJournal articleResearchpeer-review

  40. Published

    Determination of an optimal ELISA cut-off for the diagnosis of Toxoplasma gondii infection in pigs using Bayesian latent class modelling of data from multiple diagnostic tests

    Olsen, Abbey , Nielsen, H. V., Alban, L., Houe, Hans, Jensen, T. B. & Denwood, Matt, 2022, In: Preventive Veterinary Medicine. 201, 105606.

    Research output: Contribution to journalJournal articleResearchpeer-review

  41. Published

    Dietary Risk Assessment Due to the Consumption of Polycyclic Aromatic Hydrocarbon in Two Commonly Consumed Street Vended Foods

    Ankar-Brewoo, G. M., Darko, G., Abaidoo, R. C., Dalsgaard, Anders, Johnson, P. N., Ellis, W. O. & Brimer, L., 2022, In: Polycyclic Aromatic Compounds. 42, 5, p. 2151-2161

    Research output: Contribution to journalJournal articleResearchpeer-review

  42. Published

    Differences in code terminology and frequency of findings in meat inspection of finishing pigs in seven European countries

    Alban, L., Vieira-Pinto, M., Meemken, D., Maurer, P., Ghidini, S., Santos, S., Laguna, J. G., Laukkanen-Ninios, R., Alvseike, O. & Langkabel, N., 2022, In: Food Control. 132, 108394.

    Research output: Contribution to journalJournal articleResearchpeer-review

  43. Published

    Effect of vaccination on household transmission of SARS-CoV-2 Delta variant of concern

    Lyngse, Frederik Plesner, Mølbak, Kåre, Denwood, Matt, Christiansen, L. E., Møller, C. H., Rasmussen, M., Cohen, A. S., Stegger, M., Fonager, J., Sieber, R. N., Ellegaard, K. M., Nielsen, C. & Kirkeby, Carsten, 2022, In: Nature Communications. 13, 1, 3764.

    Research output: Contribution to journalJournal articleResearchpeer-review

  44. Published

    Estimating the true seroprevalence of Toxoplasma gondii in Danish pigs

    Olsen, Abbey , Sandberg, M., Houe, Hans, Nielsen, H. V., Denwood, Matt & Alban, L. M., 2022, 16th International Symposium of Veterinary Epidemiology and Economics: Connecting Animals, People, and their shared environments - Abstract book. p. 453 1 p. 36

    Research output: Chapter in Book/Report/Conference proceedingConference abstract in proceedingsResearchpeer-review

  45. Published

    Excess all-cause mortality in the USA and Europe during the COVID-19 pandemic, 2020 and 2021

    Rossen, L. M., Nørgaard, S. K., Sutton, P. D., Krause, Tyra Grove, Ahmad, F. B., Vestergaard, L. S., Mølbak, Kåre, Anderson, R. N. & Nielsen, J., 2022, In: Scientific Reports. 12, 18559.

    Research output: Contribution to journalJournal articleResearchpeer-review

  46. Published

    Fecal Shedding of Multidrug Resistant Escherichia coli Isolates in Dogs Fed with Raw Meat-Based Diets in Brazil

    Ramos, C. P., Kamei, C. Y. I., Viegas, F. M., de Melo Barbieri, J., Cunha, J. L. R., Hounmanou, Yaovi Mahuton Gildas, Coura, F. M., Santana, J. A., Lobato, F. C. F., Bojesen, Anders Miki & Silva, R. O. S., 2022, In: Antibiotics. 11, 4, 534.

    Research output: Contribution to journalJournal articleResearchpeer-review

  47. Published

    Finding New Fundamental Pieces for the Bacterial Cell Division Puzzle

    Frees, Dorte & Ingmer, Hanne, 2022, In: mBio. 13, 4, e0073722.

    Research output: Contribution to journalJournal articleResearchpeer-review

  48. Published

    From Alpha Diversity to Zzz: Interactions among sleep, the brain, and gut microbiota in the first year of life

    Schoch, S. F., Castro-Mejía, J. L., Krych, Lukasz, Leng, B., Kot, Witold, Kohler, M., Huber, R., Rogler, G., Biedermann, L., Walser, J. C., Nielsen, Dennis Sandris & Kurth, S., 2022, In: Progress in Neurobiology. 209, 11 p., 102208.

    Research output: Contribution to journalJournal articleResearchpeer-review

  49. Published

    Genome Sequences of 16 Escherichia coli Bacteriophages Isolated from Wastewater, Pond Water, Cow Manure, and Bird Feces

    Vitt, Amira Ruslanovna, Ahern, S. J., Gambino, Michela, Sørensen, Martine Camilla Holst & Brøndsted, Lone, 2022, In: Microbiology resource announcements. 11, 10

    Research output: Contribution to journalJournal articleResearchpeer-review

  50. Published

    Genomic analysis of sewage from 101 countries reveals global landscape of antimicrobial resistance

    Munk, P., Brinch, C., Møller, F. D., Petersen, T. N., Hendriksen, R. S., Seyfarth, A. M., Kjeldgaard, J. S., Svendsen, C. A., van Bunnik, B., Berglund, F., Bego, A., Power, P., Rees, C., Lambrinidis, D., Neilson, E. H. J., Gibb, K., Coventry, K., Collignon, P., Cassar, S., Allerberger, F. & 31 others, Begum, A., Hossain, Z. Z., Worrell, C., Vandenberg, O., Pieters, I., Victorien, D. T., Gutierrez, A. D. S., Soria, F., Grujić, V. R., Mazalica, N., Rahube, T. O., Tagliati, C. A., Rodrigues, D., Oliveira, G., de Souza, L. C. R., Ivanov, I., Juste, B. I., Oumar, T., Sopheak, T., Vuthy, Y., Ngandijo, A., Nzouankeu, A., Olivier, Z. A. A. J., Yost, C. K., Hansen, L. T., Jensen, P. E., Parimannan, S., Hounmanou, Yaovi Mahuton Gildas, Thomsen, J., Aarestrup, F. M. & Global Sewage Surveillance Consortium, G. S. S. C., 2022, In: Nature Communications. 13, 16 p., 7251.

    Research output: Contribution to journalJournal articleResearchpeer-review

  51. Published

    Genomic analysis of the zoonotic ST73 lineage containing avian and human extraintestinal pathogenic Escherichia coli (ExPEC)

    Becker Simoes Saidenberg, André, van Vliet, A. H. M., Stegger, M., Johannesen, T. B., Semmler, T., Cunha, M., C. de O. Silveira, A., Kuroki Anzai, E., C.A. Scaletsky, I., Dalsgaard, Anders, La Ragione, R. M. & Knöbl, T., 2022, In: Veterinary Microbiology. 267, 109372.

    Research output: Contribution to journalJournal articleResearchpeer-review

  52. Published

    Genomic and Phenotypic Insights for Toxigenic Clinical Vibrio cholerae O141

    Hounmanou, Yaovi Mahuton Gildas, Sit, B., Fakoya, B., Waldor, M. K. & Dalsgaard, Anders, 2022, In: Emerging Infectious Diseases . 28, 3, p. 617-624 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

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