Food Safety and Zoonoses

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  1. 2015
  2. Published

    Investigation of a possible outbreak of NDM-5-producing ST16 Klebsiella pneumoniae among patients in Denmark with no history of recent travel using whole-genome sequencing

    Hammerum, A. M., Hansen, F., Olesen, S. B. R., Struve, C., Holzknecht, B. J., Andersen, P. S., Thye, A., Jakobsen, L., Roder, B. L., Stegger, M. & Hansen, D. S., Sep 2015, In: Journal of Global Antimicrobial Resistance. 3, 3, p. 219-221 3 p.

    Research output: Contribution to journal › Comment/debate › Research › peer-review

  3. Published

    Two-year intervention trial to control of fish-borne zoonotic trematodes in giant gourami (Osphronemus goramy) and striped catfish (Pangasianodon hypophthalmus) in nursery ponds in the Mekong Delta, Vietnam

    Madsen, Henry, Thien, P. C., Nga, H. T. N., Clausen, J. H., Dalsgaard, Anders & Murrell, K. D., 21 Sep 2015, In: Acta Tropica. 152, p. 201-207 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Biocide Susceptibility of Staphylococcus aureus CC398 and CC30 Isolates from Pigs and Identification of the Biocide Resistance Genes, qacG and qacC

    Seier-Petersen, M. A., Nielsen, L. N., Ingmer, Hanne, Aarestrup, F. M. & Agersø, Y., Oct 2015, In: Microbial Drug Resistance. 21, 5, p. 527-536 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Genetic variations in pattern recognition receptor loci are associated with anti-TNF response in patients with rheumatoid arthritis

    Sode, J., Vogel, U., Bank, S., Andersen, P. S., Hetland, Merete Lund, Locht, H., Heegaard, N. H. H. & Andersen, V., 6 Oct 2015, In: P L o S One. 10, 10, 13 p., e0139781.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Pharmacodynamic modelling of in vitro activity of tetracycline against a representative, naturally occurring population of porcine Escherichia coli

    Ahmad, A., Zachariasen, C., Christiansen, L. E., Græsbøll, K., Toft, N., Matthews, L., Damborg, Peter Panduro, Agersø, Y., Olsen, John Elmerdahl & Nielsen, Søren Saxmose, Nov 2015, In: Acta Veterinaria Scandinavica (Online). 57, 8 p., 79.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Stepwise decrease in daptomycin susceptibility in clinical Staphylococcus aureus isolates associated with an initial mutation in rpoB and a compensatory inactivation of the clpX gene

    Bæk, K. T., Thøgersen, L., Mogensen, R. G., Pedersen, M. M., Thomsen, Line Elnif, Petersen, A., Skov, Søren, Cameron, D. R., Peleg, A. Y. & Frees, Dorte, Nov 2015, In: Antimicrobial Agents and Chemotherapy. 59, 11, p. 6983-6991 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    A survey for potentially zoonotic gastrointestinal parasites of dogs and pigs in Cambodia

    Inpankaew, T., Murrell, K. D., Pinyopanuwat, N., Chhoun, C., Khov, K., Sem, T., Sorn, S., Muth, S. & Dalsgaard, Anders, Dec 2015, In: Acta Parasitologica. 60, 4, p. 601-604 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Amphibian antimicrobial peptide fallaxin analogue FL9 affects virulence gene expression and DNA replication in Staphylococcus aureus

    Gottschalk, S., Gottlieb, C. T., Vestergaard, M., Hansen, Paul Robert, Gram, L., Ingmer, Hanne & Thomsen, Line Elnif, 1 Dec 2015, In: Journal of Medical Microbiology. 64, 12, p. 1504-1513 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Multidrug-resistant Streptococcus pneumoniae isolates from healthy Ghanaian preschool children

    Dayie, N. T. K. D., Arhin, R. E., Newman, M. J., Dalsgaard, Anders, Bisgaard, M., Frimodt-Møller, N. & Slotved, H., 10 Dec 2015, In: Microbial Drug Resistance. 21, 6, p. 636-642 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Polymorphisms in the Toll-like receptor and the IL-23/IL-17 pathways were associated with susceptibility to inflammatory bowel disease in a Danish cohort

    Bank, S., Andersen, P. S., Burisch, J., Pedersen, N., Roug, S., Galsgaard, J., Turino, S. Y., Brodersen, J. B., Rashid, S., Rasmussen, B. K., Avlund, S., Olesen, T. B., Hoffmann, H. J., Nexø, B. A., Sode, J., Vogel, U. & Andersen, V., 23 Dec 2015, In: P L o S One. 10, 12, 14 p., e0145302.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. 2016
  13. Published

    Antigen uptake in zebrafish (Danio rerio) at different life stages

    Korbut, R., Mehrdana, Foojan, Kania, Per, Larsen, M. H., Frees, Dorte & Jørgensen, Louise von Gersdorff, 2016.

    Research output: Contribution to conference › Conference abstract for conference › Research

  14. Published

    Bacterial viruses enable their host to acquire antibiotic resistance genes from neighbouring cells

    Haaber, J. K., Leisner, Jørgen, Cohn, M. T., Catalan Moreno, A., Nielsen, J. B., Westh, Henrik T., Penadés, J. R. & Ingmer, Hanne, 2016, In: Nature Communications. 7, 8 p., 13333.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Cross-Talk between Staphylococcus aureus and Other Staphylococcal Species via the agr Quorum Sensing System

    Canovas de la Nuez, J., Baldry, M., Bojer, Martin Saxtorph, Andersen, P. S., Grzeskowiak, P. K., Stegger, M., Damborg, Peter Panduro, Olsen, Christian Adam & Ingmer, Hanne, 2016, In: Frontiers in Microbiology. 7, 1733.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Fødevaresikkerhed, egenkontrol og kultur: et studie af egenkontrollen og fødevaresikkerhedskulturen på tre mindre kødforarbejdende virksomheder

    Nøhr, R., Larsen, M. H., Nørrung, Birgit & Lassen, J., 2016, Institut for Fødevare- og Ressourceøkonomi, Københavns Universitet. 42 p. (IFRO Rapport; No. 246).

    Research output: Book/Report › Report › Research

  17. Published

    Heat-resistant, extended-spectrum β-lactamase-producing Klebsiella pneumoniae in endoscope-mediated outbreak

    Jørgensen, S. B., Bojer, Martin Saxtorph, Boll, E. J., Martin, Y., Helmersen, K., Skogstad, M. & Struve, C., 2016, In: Journal of Hospital Infection. 93, 1, p. 57-62

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Predation and selection for antibiotic resistance in natural environments

    Leisner, Jørgen, Jørgensen, Niels O. G. & Middelboe, Mathias, 2016, In: Evolutionary Applications (Online). 9, 3, p. 427-434 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    The agr inhibitors solonamide B and analogues alter immune responses to Staphylococccus aureus but do not exhibit adverse effects on immune cell functions

    Baldry, M., Kitir, B., Frøkiær, Hanne, Christensen, S. B., Taverne, N., Meijerink, M., Franzyk, Henrik, Olsen, Christian Adam, Wells, J. M. & Ingmer, Hanne, 2016, In: P L o S One. 11, 1, 17 p., e0145618.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    The Cell Wall Polymer Lipoteichoic Acid Becomes Nonessential in Staphylococcus aureus Cells Lacking the ClpX Chaperone

    Baek, K. T., Bowman, L., Millership, C., Sogaard, M. D., Kaever, V., Siljamaki, P., Savijoki, K., Varmanen, P., Nyman, T. A., Grundling, A. & Frees, Dorte, 2016, In: mBio (Print). 7, 4, 11 p., 01228.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Undersøgelse af udbening af søer: Er det nødvendigt at udbene søer, hvor der findes tegn på tidligere tilstedeværelse af blodforgiftning?

    Pedersen, T. Ø., Bækbo, A. K., Larsen, M. H., Petersen, J. V. & Alban, L. M., 2016, In: Dansk Veterinærtidsskrift. 2016, 7, p. 34-39 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Antibiotic combination therapy can select for broad-spectrum multidrug resistance in Pseudomonas aeruginosa

    Vestergaard, M., Paulander, W., Marvig, R. L., Clasen, J., Jochumsen, N., Molin, S., Jelsbak, L., Ingmer, Hanne & Folkesson, A., Jan 2016, In: International Journal of Antimicrobial Agents. 47, 1, p. 48-55

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Application of a Multiplex Quantitative PCR to Assess Prevalence and Intensity Of Intestinal Parasite Infections in a Controlled Clinical Trial

    Llewellyn, S., Inpankaew, T., Nery, S. V., Gray, D. J., Verweij, J. J., Clements, A. C. A., Gomes, S. J., Traub, R. & McCarthy, J. S., Jan 2016, In: PLoS Neglected Tropical Diseases . 10, 1, 19 p., e0004380.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    In vivo expression of antimicrobial peptides in atopic dermatitis

    Clausen, M., Slotved, H., Krogfelt, K. A., Andersen, P. S. & Agner, Tove, Jan 2016, In: Experimental Dermatology. 25, 1, p. 3-9

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Environmental contamination and transmission of Ascaris suum in Danish organic pig farms

    Katakam, K. K., Thamsborg, Stig Milan, Dalsgaard, Anders, Kyvsgaard, N. C. & Mejer, Helena, 9 Feb 2016, In: Parasites & Vectors. 9, 80.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    D-Alanylation of Teichoic Acids and Loss of Poly-N-Acetyl Glucosamine in Staphylococcus aureus during Exponential Growth Phase Enhance IL-12 Production in Murine Dendritic Cells

    Lund, L. D., Ingmer, Hanne & Frøkiær, Hanne, 12 Feb 2016, In: P L o S One. 11, 2, e0149092.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Removal of Cryptosporidium parvum oocysts in low quality water using Moringa oleifera seed extract as coagulant

    Petersen, H. H., Petersen, T. B., Enemark, H. L., Olsen, A. & Dalsgaard, Anders, Mar 2016, In: Food and Waterborne Parasitology. 3, p. 1-8 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Injuries can prolong lifespan in Drosophila melanogaster males

    Henten, A. M. V., Loeschcke, V., Pedersen, J. G., Leisner, Jørgen & Sarup, P., Apr 2016, In: Biogerontology. 17, 2, p. 337-346

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    The lysine-peptoid hybrid LP5 maintain activity under physiological conditions and affects virulence gene expression in Staphylococcus aureus

    Gottschalk, S., Ingmer, Hanne & Thomsen, Line Elnif, Apr 2016, In: Peptides. 78, p. 24-29

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    Management measures to control diseases reported by tilapia (Oreochromis spp.) and whiteleg shrimp (Litopenaeus vannamei) farmers in Guangdong, China

    Li, K., Liu, L., Clausen, J. H., Lu, M. & Dalsgaard, Anders, 20 Apr 2016, In: Aquaculture. 457, p. 91-99 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Evolution of metabolic divergence in Pseudomonas aeruginosa during long-term infection facilitates a proto-cooperative interspecies interaction

    Michelsen, C. F., Hossein Khademi, S. M., Johansen, Helle Krogh, Ingmer, Hanne, Dorrestein, P. C. & Jelsbak, L., Jun 2016, In: I S M E Journal. 10, 6, p. 1323-1336

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Simple method for correct enumeration of Staphylococcus aureus

    Haaber, J., Cohn, M. T., Petersen, A. & Ingmer, Hanne, Jun 2016, In: Journal of Microbiological Methods. 125, p. 58-63

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Prevalence and molecular characterization of Cryptosporidum spp. and Giardia spp. in environmental samples in Hanam province, Vietnam

    Nguyen, T. T., Traub, R. J., Pham, P. D., Nguyen, T. H., Nguyen, K. C., Phung, D. C. & Dalsgaard, Anders, 1 Jun 2016, In: Food and Waterborne Parasitology. 3, p. 13-20 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Practices and Factors Influencing the Use of Antibiotics in Selected Poultry Farms in Ghana

    Boamah, V., Odoi, H. & Dalsgaard, Anders, 15 Jun 2016, In: Journal of Antimicrobial Agents. 2, 2, 8 p., 1000120.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Another look at the mechanism involving trimeric dUTPases in Staphylococcus aureus pathogenicity island induction involves novel players in the party

    Maiques, E., Quiles-Puchalt, N., Donderis, J., Ciges Tomas, Jose Rafael, Alite, C., Bowring, Janine Zara, Humphrey, S., Penadés, J. R. & Marina, A., 20 Jun 2016, In: Nucleic Acids Research. 44, 11, p. 5457-69 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Multistrain models predict sequential multidrug treatment strategies to result in less antimicrobial resistance than combination treatment

    Ahmad, A., Zachariasen, C., Christiansen, L. E., Græsbøll, K., Toft, N., Matthews, L., Olsen, John Elmerdahl & Nielsen, Søren Saxmose, 23 Jun 2016, In: B M C Microbiology. 16, 10 p., 118.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Copresence of tet(K) and tet(M) in Livestock-Associated Methicillin-Resistant Staphylococcus aureus Clonal Complex 398 Is Associated with Increased Fitness during Exposure to Sublethal Concentrations of Tetracycline

    Larsen, J., Clasen, J., Hansen, J. E., Paulander, W., Petersen, A., Larsen, A. R. & Frees, Dorte, Jul 2016, In: Antimicrobial Agents and Chemotherapy. 60, 7, p. 4401-4403

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Antigen Uptake during Different Life Stages of Zebrafish (Danio rerio) Using a GFP-Tagged Yersinia ruckeri

    Korbut, R., Mehrdana, Foojan, Kania, Per, Larsen, M. H., Frees, Dorte, Dalsgaard, I. & Jørgensen, Louise von Gersdorff, 12 Jul 2016, In: P L o S One. 11, 7, e0158968.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Aeromonas salmonicida subsp. salmonicida strains isolated from Chinese freshwater fish contain a novel genomic island and possible regional-specific mobile genetic elements profiles

    Long, M., Nielsen, Tue Kjærgaard, Leisner, Jørgen, Hansen, L. H., Shen, Z. X., Zhang, Q. Q. & Li, A., Sep 2016, In: F E M S Microbiology Letters. 363, 17, 8 p., 190.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    An evaluation of fish health-management practices and occupational health hazards associated with Pangasius catfish (Pangasianodon hypophthalmus) aquaculture in the Mekong Delta, Vietnam

    Phu, T., Nguyen Thanh, P., Dung, T. T., Hai, D. M., Son, V. N., Rico, A., Clausen, J. H., Madsen, Henry, Murray, F. J. & Dalsgaard, Anders, Sep 2016, In: Aquaculture Research. 47, 9, p. 2778-2794 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Genes associated to lactose metabolism illustrate the high diversity of Carnobacterium maltaromaticum

    Iskandar, C. F., Cailliez-Grimal, C., Rahman, A., Rondags, E., Remenant, B., Zagorec, M., Leisner, Jørgen, Borges, F. & Revol-Junelles, A., Sep 2016, In: Food Microbiology. 58, p. 79-86

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Streptokinase Treatment Reverses Biofilm-Associated Antibiotic Resistance in Staphylococcus aureus

    Jørgensen, N. P., Zobek, N., Dreier, C., Haaber, J. K., Ingmer, Hanne, Larsen, O. H. & Meyer, R. L., 20 Sep 2016, In: Microorganisms. 4, 3, 12 p., 36.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    The qacC Gene Has Recently Spread between Rolling Circle Plasmids of Staphylococcus, Indicative of a Novel Gene Transfer Mechanism

    Wassenaar, T. M., Ussery, D. W. & Ingmer, Hanne, 27 Sep 2016, In: Frontiers in Microbiology. 7, 11 p., 1528.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Ribosomal dimerization factor YfiA is the major protein synthesized after abrupt glucose depletion in Lactococcus lactis

    Breüner, A., Frees, Dorte, Varmanen, P., Boguta, A. M., Hammer, K., Martinussen, J. & Kilstrup, M., Oct 2016, In: Microbiology. 162, 10, p. 1829-1839 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Stress Responses in Staphylococcus aureus

    Frees, Dorte & Ingmer, Hanne, Oct 2016, Staphylococcus: Genetics and Physiology. Somerville, G. A. (ed.). Caister Academic Press, p. 221-248

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  46. Published

    Rifampin Resistance rpoB Alleles or Multicopy Thioredoxin/Thioredoxin Reductase Suppresses the Lethality of Disruption of the Global Stress Regulator spx in Staphylococcus aureus

    Villanueva, M., Jousselin, A., Baek, K. T., Prados, J., Andrey, D. O., Renzoni, A., Ingmer, Hanne, Frees, Dorte & Kelley, W. L., 1 Oct 2016, In: Journal of Bacteriology. 198, 19, p. 2719-2731 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Bacteriophage Moonlighting Proteins in the Control of Bacterial Pathogenicity

    Bowring, Janine Zara, Marina, A., Penadés, J. R. & Quiles-Puchalt, N., 3 Oct 2016, Moonlighting Proteins: Novel Virulence Factors in Bacterial Infections. Wiley-Blackwell, p. 387-412 26 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  48. Published

    The evolution of antimicrobial peptide resistance in Pseudomonas aeruginosa is shaped by strong epistatic interactions

    Jochumsen, N., Marvig, R. L., Damkiaer, S., Jensen, R. L., Paulander, W., Molin, S., Jelsbak, L. & Folkesson, A., 3 Oct 2016, In: Nature Communications. 7, 10 p., 13002.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Bacteriological Quality of Tilapia Fish from Treated Wastewater in Peri-Urban Areas, Morogoro, Tanzania

    Mhongole, O., Mdegela, R., Kusiluka, L. & Dalsgaard, Anders, 6 Oct 2016, In: Agriculture, Forestry and Fisheries. 5, 5, p. 202-206 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Toxigenic Vibrio cholerae O1 in vegetables and fish raised in wastewater irrigated fields and stabilization ponds during a non-cholera outbreak period in Morogoro, Tanzania: an environmental health study

    Hounmanou, Y. M. G., Mdegela, R. H., Dougnon, T. V., Mhongole, O. J., Mayila, E. S., Malakalinga, J., Makingi, G. & Dalsgaard, Anders, 18 Oct 2016, In: BMC Research Notes. 9, 1, p. 466 1 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    Evidence for Human Adaptation and Foodborne Transmission of Livestock-Associated Methicillin-Resistant Staphylococcus aureus

    Larsen, J., Stegger, M., Andersen, P. S., Petersen, A., Larsen, A. R., Westh, H., Agersø, M. Y. F., Fetsch, A., Kraushaar, B., Käsbohrer, A., Feβler, A. T., Schwarz, S., Cuny, C., Witte, W., Butaye, P., Denis, O., Haenni, M., Madec, J-Y., Jouy, E., Laurent, F. & 15 others, Battisti, A., Franco, A., Alba, P., Mammina, C., Pantosti, A., Monaco, M., Wagenaar, J. A., de Boer, E., van Duijkeren, E., Heck, M., Domínguez, L., Torres, C., Zarazaga, M., Price, L. B. & Skov, R. L., Nov 2016, In: Clinical Infectious Diseases. 63, 10, p. 1349-1352 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  52. Published

    Prevalence and antimicrobial resistance of Salmonella serovars isolated from poultry in Ghana

    Andoh, L. A., Dalsgaard, Anders, Obiri-Danso, K., Newman, M. J., Barco, L. & Olsen, John Elmerdahl, Nov 2016, In: Epidemiology and Infection. 144, 15, p. 3288-3299 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  53. Published

    The food safety value of de-boning finishing pig carcasses with lesions indicative of prior septicaemia

    Bækbo, A. K., Petersen, J. V., Larsen, M. H. & Alban, L. M., Nov 2016, In: Food Control. 69, p. 177-184

    Research output: Contribution to journal › Journal article › Research › peer-review

  54. Published

    Use of WGS data for investigation of a long-term NDM-1-producing Citrobacter freundii outbreak and secondary in vivo spread of blaNDM-1 to Escherichia coli, Klebsiella pneumoniae and Klebsiella oxytoca

    Hammerum, A. M., Hansen, F., Linde Nielsen, H., Jakobsen, L., Stegger, M., Andersen, P. S., Jensen, P., Nielsen, Tue Kjærgaard, Hansen, L. H., Hasman, H. & Fuglsang-Damgaard, D., Nov 2016, In: Journal of Antimicrobial Chemotherapy. 71, 11, p. 3117-3124 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  55. Published

    Glucose metabolism via the Entner-Doudoroff pathway in Campylobacter: a rare trait that enhances survival and promotes biofilm formation in some isolates

    Vegge, C. S., van Rensburg, M. J. J., Rasmussen, J. J., Maiden, M. C. J., Johnsen, L. G., Danielsen, M., MacIntyre, S., Ingmer, Hanne & Kelly, D. J., 22 Nov 2016, In: Frontiers in Microbiology. 7, 16 p., 1877.

    Research output: Contribution to journal › Journal article › Research › peer-review

  56. Published

    Novel pathways for ameliorating the fitness cost of gentamicin resistant small colony variants

    Vestergaard, M., Paulander, W. E. A., Leng, B., Nielsen, J. B., Westh, Henrik T. & Ingmer, Hanne, 22 Nov 2016, In: Frontiers in Microbiology. 7, 12 p., 1866.

    Research output: Contribution to journal › Journal article › Research › peer-review

  57. Published

    Adaptation of Escherichia coli traversing from the faecal environment to the urinary tract

    Nielsen, K. L., Stegger, M., Godfrey, P. A., Feldgarden, M., Andersen, P. S. & Frimodt-Moller, N., Dec 2016, In: International Journal of Medical Microbiology. 306, 8, p. 595-603

    Research output: Contribution to journal › Journal article › Research › peer-review

  58. Published

    Aflatoxins and fumonisins in rice and maize staple cereals in Northern Vietnam and dietary exposure in different ethnic groups

    Bui, H. M., Tuyen, L. D., Do, T. T., Madsen, Henry & Dalsgaard, Anders, Dec 2016, In: Food Control. 70, p. 191-200

    Research output: Contribution to journal › Journal article › Research › peer-review

  59. Published

    Characterization of CRISPR-Cas system in clinical Staphylococcus epidermidis strains revealed its potential association with bacterial infection sites

    Li, Q., Xie, X., Yin, K., Tang, Y., Zhou, X., Chen, Y., Xia, J., Hu, Y., Ingmer, Hanne, Li, Y. & Jiao, X., Dec 2016, In: Microbiological Research. 193, p. 103-110 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  60. Published

    Dietary exposure to aflatoxin B-1, ochratoxin A and fuminisins of adults in Lao Cai province, Viet Nam: A total dietary study approach

    Bui, H. M., Le Danh Tuyen, Do Huu Tuan, Brimer, L. & Dalsgaard, Anders, Dec 2016, In: Food and Chemical Toxicology. 98, Part B, p. 127-133

    Research output: Contribution to journal › Journal article › Research › peer-review

  61. Published

    Occurrence of Escherichia coli in Brassica rapa L. chinensis irrigated with low quality water in urban areas of Morogoro, Tanzania

    Mhongole, O. J., Mdegela, R. H., Kusiluka, L. J. M. & Dalsgaard, Anders, 7 Dec 2016, In: African Journal of Biotechnology. 15, 49, p. 2772-2777 6 p., FC63E4461935.

    Research output: Contribution to journal › Journal article › Research › peer-review

  62. Published

    Influence of soil structure on contaminant leaching from injected slurry

    Amin, M. G. M., Pedersen, C. O., Forslund, A., Veith, T. L. & Lægdsmand, M., 15 Dec 2016, In: Journal of Environmental Management. 184, 2, p. 289-296 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  63. Published

    Genome-Wide Identification of Antimicrobial Intrinsic Resistance Determinants in Staphylococcus aureus

    Vestergaard, M., Leng, B., Haaber, J., Bojer, Martin Saxtorph, Vegge, C. S. & Ingmer, Hanne, 19 Dec 2016, In: Frontiers in Microbiology. 7, 10 p., 2018.

    Research output: Contribution to journal › Journal article › Research › peer-review

  64. Published

    Norlichexanthone Reduces Virulence Gene Expression and Biofilm Formation in Staphylococcus aureus

    Baldry, M., Nielsen, A., Bojer, Martin Saxtorph, Zhao, Y., Friberg, C., Ifrah, D., Heede, N. G., Larsen, T. O., Frøkiær, Hanne, Frees, Dorte, Zhang, L., Dai, H. & Ingmer, Hanne, 22 Dec 2016, In: PLOS ONE. 11, 12, 16 p., e0168305.

    Research output: Contribution to journal › Journal article › Research › peer-review

  65. 2017
  66. Published

    A Numbers Game: Ribosome Densities, Bacterial Growth, and Antibiotic-Mediated Stasis and Death

    Levin, B. R., McCall, I. C., Perrot, V., Weiss, H., Ovsepian, A. & Baquero, F., 2017, In: mBio. 8, 1, 13 p., e02253-16.

    Research output: Contribution to journal › Journal article › Research › peer-review

  67. Published

    A broad range quorum sensing inhibitor working through sRNA inhibition

    Jakobsen, Tim Holm, Warming, A. N., Vejborg, R. M., Moscoso, J. A., Stegger, M., Lorenzen, F., Rybtke, Morten Levin, Andersen, Jens Bo, Petersen, R., Andersen, P. S., Nielsen, Thomas Eiland, Tolker-Nielsen, Tim, Filloux, A., Ingmer, Hanne & Givskov, Michael, 2017, In: Scientific Reports. 7, 1, 12 p., 9857.

    Research output: Contribution to journal › Journal article › Research › peer-review

  68. Published

    A porcine subcutaneous Staphylococcus aureus abscess model - a pilot study

    Nielsen, O. L., Larsen, M. N., Frees, Dorte, Pedersen, M. M., Skov, Søren & Olsen, Lisbeth Høier, 2017.

    Research output: Contribution to conference › Conference abstract for conference › Communication

  69. Published

    A universal primer-independent next-generation sequencing approach for investigations of norovirus outbreaks and novel variants

    Fonager, J., Stegger, M., Rasmussen, L. D., Poulsen, M. W., Ronn, J., Andersen, P. S. & Fischer, Thea Kølsen, 2017, In: Scientific Reports. 7, 11 p., 813.

    Research output: Contribution to journal › Journal article › Research › peer-review

  70. Published

    Comparative genomic analysis reveals ecological differentiation in the genus Carnobacterium

    Iskandar, C. F., Borges, F., Taminiau, B., Daube, G., Zagorec, M., Remenant, B., Leisner, Jørgen, Hansen, M. A., Sørensen, Søren Johannes, Mangavel, C., Cailliez-Grimal, C. & Revol-Junelles, A., 2017, In: Frontiers in Microbiology. 8, 14 p., 357.

    Research output: Contribution to journal › Journal article › Research › peer-review

  71. Published

    Evaluation of the food safety risk associated with de-boning of Danish sows: Investigations on sows with chronic purulent lesions indicative of prior septicaemia

    Pedersen, T. Ø., Bækbo, A. K., Petersen, J. V., Larsen, M. H. & Alban, L. M., 2017, In: Fleischwirtschaft International. 2017, 2, p. 66-70

    Research output: Contribution to journal › Journal article › Research › peer-review

  72. Published

    Khat Production and Consumption; Its Implication on Land Area Used for Crop Production and Crop Variety Production among Rural Household of Ethiopia

    Wondafrash Ademe, B., Coates C, J., Dalsgaard, Anders, Brimer, L. & Belachew Lema, T., 2017, In: Journal of Food Security. 5, 4, p. 148-154

    Research output: Contribution to journal › Journal article › Research › peer-review

  73. Published

    Leaching of viruses and other microorganisms naturally occurring in pig slurry to tile drains on a well-structured loamy field in Denmark

    Krog , J. S., Forslund, A., Larsen, L. E., Dalsgaard, Anders, Kjær, J., Olsen, P. & Schultz, A. C., 2017, In: Hydrogeology Journal. 25, 4, p. 1045–1062 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  74. Published

    Levels of Ovo-transferrin concentrations in layer chickens experimentally infected with wild-type or small-colony variants of Streptococcus equi subsp. zooepidemicus via different routes

    Roy, K., Pors, S. E., Biswas, P. K. & Bojesen, Anders Miki, 2017, In: Bangladesh Journal of Veterinary and Animal Science. 5, 1, p. 17-23

    Research output: Contribution to journal › Journal article › Research › peer-review

  75. Published

    Methods for initial characterization of Campylobacter jejuni bacteriophages

    Sørensen, Martine Camilla Holst, Gencay, Y. E. & Brøndsted, Lone, 2017, Campylobacter jejuni: Methods and Protocols. Humana Press, Vol. 1512. p. 91-105 15 p. (Methods in Molecular Biology, Vol. 1512).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  76. Published

    Methods for isolation, purification, and propagation of bacteriophages of Campylobacter jejuni

    Gencay, Y. E., Birk, T., Sørensen, Martine Camilla Holst & Brøndsted, Lone, 2017, Campylobacter jejuni: Methods and Protocols. Humana Press, Vol. 1512. p. 19-28 10 p. (Methods in Molecular Biology, Vol. 1512).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  77. Published

    Microbial quality and safety of fresh and dried Rastrineobola argentea from Lake Victoria, Tanzania

    Baniga, Z., Dalsgaard, Anders, Mhongole, O. J., Madsen, Henry & Mdegela, R. H., 2017, In: Food Control. 81, p. 16-22 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  78. Published

    Mitral Regurgitation Severity and Left Ventricular Systolic Dimension Predict Survival in Young Cavalier King Charles Spaniels

    Reimann, Maria Josefine, Moller, J. E., Haggstrom, J., Martinussen, Torben, Zatrazemi, S. S. C., Svanholm, L., Nielsen, L. B. M., Pedersen, H. D. & Olsen, Lisbeth Høier, 2017, In: Journal of Veterinary Internal Medicine. 31, 4, p. 1008-1016 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  79. Published

    Myricetin protects Galleria mellonella against Staphylococcus aureus infection and inhibits multiple virulence factors

    Nogueira-Silva, L., Da Hora, G. C. A., Soares, G. T. A. P., Bojer, Martin Saxtorph, Ingmer, Hanne, Macedo, A. J. & Trentin, D. S., 2017, In: Scientific Reports. 7, 16 p., 2823.

    Research output: Contribution to journal › Journal article › Research › peer-review

  80. Published

    Phage exposure causes dynamic shifts in the expression states of specific phase-variable genes of Campylobacter jejuni

    Aidley, J., Sørensen, Martine Camilla Holst, Bayliss, C. D. & Brøndsted, Lone, 2017, In: Microbiology (United Kingdom). 163, 6, p. 911-919 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  81. Published

    Prevalence and characterization of Salmonella among humans in Ghana

    Andoh, L. A., Ahmed, S., Olsen, John Elmerdahl, Obiri-Danso, K., Newman, M. J., Opintan, J. A., Barco, L. & Dalsgaard, Anders, 2017, In: Tropical Medicine and Health. 45, 11 p., 3.

    Research output: Contribution to journal › Journal article › Research › peer-review

  82. Published

    Protocols for screening antimicrobial peptides that influence virulence gene expression in Staphylococcus aureus

    Bojer, Martin Saxtorph, Baldry, M. & Ingmer, Hanne, 2017, Antimicrobial Peptides: Methods and Protocols. Hansen, P. R. (ed.). Humana Press, Vol. 1548. p. 387-394 8 p. (Methods in Molecular Biology, Vol. 1548).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  83. Published

    Significance of phage-host interactions for biocontrol of Campylobacter jejuni in food

    Athina, Z., Sørensen, Martine Camilla Holst, Elsser-Gravesen, A. & Brøndsted, Lone, 2017, In: Food Control. 73, Part B, p. 1169-1175

    Research output: Contribution to journal › Journal article › Research › peer-review

  84. Published

    Sources and fate of antimicrobials in integrated fish-pig and non-integrated tilapia farms

    Li, K., Liu, L., Zhan, J., Scippo, M. L., Hvidtfeldt, K., Liu, Y. & Dalsgaard, Anders, 2017, In: Science of the Total Environment. 595, p. 393-399 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  85. Published

    Structure-activity relationship study based on Autoinducing Peptide (AIP) from dog pathogen S. schleiferi

    Gless, B. H., Peng, P., Pedersen, K. D., Gotfredsen, C. H., Ingmer, Hanne & Olsen, Christian Adam, 2017, In: Organic Letters. 19, 19, p. 5276–5279

    Research output: Contribution to journal › Letter › Research › peer-review

  86. Published

    The ClpXP protease is dispensable for degradation of unfolded proteins in Staphylococcus aureus

    Stahlhut, S. G., Alqarzaee, A. A., Jensen, C., Fisker, N. S., Pereira, A. R., Pinho, M. G., Thomas, V. C. & Frees, Dorte, 2017, In: Scientific Reports. 7, 14 p., 11739.

    Research output: Contribution to journal › Journal article › Research › peer-review

  87. Published

    The Ribosomal Protein uL22 Modulates the Shape of the Protein Exit Tunnel

    Wekselman, I., Zimmerman, E., Davidovich, C., Belousoff, M., Matzov, D., Krupkin, M., Rozenberg, H., Bashan, A., Friedlander, G., Kjeldgaard, J., Ingmer, Hanne, Lindahl, L., Zengel, J. M. & Yonath, A. E., 2017, In: Structure. 25, 8, p. 1233-1241.e3 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  88. Published

    The ribosomal protein uL22 modulates the shape of the nascent protein exit tunnel

    Wekselman, I., Zimmerman, E., Davidovich, C., Rozenberg, H., Bashan, A., Friedlander, G., Kjeldgaard, J., Ingmer, Hanne, Lindahl, L., Zengel, J. & Yonath, A., 2017, In: FEBS Journal. 284, S1, p. 208-208

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  89. Published

    Transfer of Antibiotic Resistance in Staphylococcus aureus

    Haaber, J., Penadés, J. R. & Ingmer, Hanne, 2017, In: Trends in Microbiology. 25, 11, 13 p., 893-905.

    Research output: Contribution to journal › Journal article › Research › peer-review

  90. Published

    Use practices of antimicrobials and other compounds by shrimp and fish farmers in Northern Vietnam

    Thi Kim Chi, T., Clausen, J. H., Van, P. T., Tersbøl, Britt Pinkowski & Dalsgaard, Anders, 2017, In: Aquaculture Reports. 7, p. 40-47 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  91. Published

    Whole-genome sequence of the bacteriophage-sensitive strain Campylobacter jejuni NCTC12662

    Gencay, Y. E., Sørensen, Martine Camilla Holst & Brøndsted, Lone, 2017, In: Genome Announcements. 5, 21, e00409-17.

    Research output: Contribution to journal › Journal article › Research › peer-review

  92. Published

    Antimicrobial peptide exposure selects for Staphylococcus aureus resistance to human defence peptides

    Kubicek-Sutherland, J. Z., Lofton, H., Vestergaard, M., Hjort, K., Ingmer, Hanne & Anderson, D. I., Jan 2017, In: Journal of Antimicrobial Chemotherapy. 72, 1, p. 115-127 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  93. Published

    Spread of avian pathogenic Escherichia coli ST117 O78:H4 in Nordic broiler production

    Ronco, T., Stegger, M., Olsen, Rikke Heidemann, Sekse, C., Nordstoga, A. B., Pohjanvirta, T., Lilje, B., Lyhs, U., Andersen, P. S. & Pedersen, K., 3 Jan 2017, In: BMC Genomics. 18, 8 p., 13.

    Research output: Contribution to journal › Journal article › Research › peer-review

  94. Published

    Characterization of Salmonella spp. from wastewater used for food production in Morogoro, Tanzania

    Mhongole, O. J., Mdegela, R. H., Kusiluka, L. J. M., Forslund, A. & Dalsgaard, Anders, Mar 2017, In: World Journal of Microbiology and Biotechnology. 33, 3, 7 p., 42.

    Research output: Contribution to journal › Journal article › Research › peer-review

  95. Published

    Comparative Genomics of Vibrio cholerae O1 Isolated from Cholera Patients in Bangladesh

    Hossain, Z. Z., Leekitcharoenphon, P., Dalsgaard, Anders, Sultana, R., Begum, A., Jensen, Peter Kjær & Hendriksen, R. S., May 2017. 1 p.

    Research output: Contribution to conference › Poster › Research

  96. Published

    Methicillin-resistant and -susceptible Staphylococcus aureus from retail meat in Denmark

    Tang, Y., Larsen, J., Kjeldgaard, J., Andersen, P. S., Skov, R. & Ingmer, Hanne, 16 May 2017, In: International Journal of Food Microbiology. 249, p. 72-76

    Research output: Contribution to journal › Journal article › Research › peer-review

  97. Published

    Prevalence and antibiotic resistance of coagulase-negative Staphylococci isolated from poultry farms in three regions of Ghana

    Boamah, V. E., Agyare, C., Odoi, H., Adu, F., Gbedema, S. & Dalsgaard, Anders, 13 Jun 2017, In: Infection and Drug Resistance. 2017, 10, p. 175-183

    Research output: Contribution to journal › Journal article › Research › peer-review

  98. Published

    Genome analysis of Clostridium perfringens isolates from healthy and necrotic enteritis infected chickens and turkeys

    Ronco, T., Stegger, M., Ng, K. L., Lilje, B., Lyhs, U., Andersen, P. S. & Pedersen, K., Jul 2017, In: BMC Research Notes. 10, 1, 6 p., 270.

    Research output: Contribution to journal › Journal article › Research › peer-review

  99. Published

    Salmonella Weltevreden in integrated and non-integrated tilapia aquaculture systems in Guangdong, China

    Li, K., Petersen, G., Barco, L., Hvidtfeldt, K., Liu, L. & Dalsgaard, Anders, Aug 2017, In: Food Microbiology. 65, p. 19-24

    Research output: Contribution to journal › Journal article › Research › peer-review

  100. Published

    Pirating conserved phage mechanisms promotes promiscuous staphylococcal pathogenicity island transfer

    Bowring, Janine Zara, Neamah, M. M., Donderis, J., Mir-Sanchis, I., Alite, C., Ciges Tomas, Jose Rafael, Maiques, E., Medmedov, I., Marina, A. & Penadés, J. R., 8 Aug 2017, In: eLife. 6

    Research output: Contribution to journal › Journal article › Research › peer-review

  101. Published

    Convergent evolution involving dimeric and trimeric dUTPases in pathogenicity island mobilization

    Donderis, J., Bowring, Janine Zara, Maiques, E., Ciges Tomas, Jose Rafael, Alite, C., Mehmedov, I., Tormo-Mas, M. A., Penadés, J. R. & Marina, A., Sep 2017, In: PLoS Pathogens. 13, 9, p. e1006581

    Research output: Contribution to journal › Journal article › Research › peer-review

  102. Published

    Inhibition of the ATP Synthase Eliminates the Intrinsic Resistance of Staphylococcus aureus towards Polymyxins

    Vestergaard, M., Nøhr-Meldgaard, K., Bojer, Martin Saxtorph, Krogsgård Nielsen, C., Meyer, R. L., Slavetinsky, C., Peschel, A. & Ingmer, Hanne, 5 Sep 2017, In: mBio. 8, 5, 10 p., e01114-17.

    Research output: Contribution to journal › Journal article › Research › peer-review

  103. Published

    Dose dependent induction of hypocoagulability and leukocyte interaction by aggregating Methicillin Resistant Staphylococcus aureus (MRSA) in canine whole blood in vitro

    Krogh, Anne Kirstine Havnsøe, Haaber, J. K., Bochsen, L., Ingmer, Hanne & Kristensen, Annemarie T., 7 Sep 2017.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

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