Staphylococcal ClpXP protease targets the cellular antioxidant system to eliminate fitness-compromised cells in stationary phase

Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  • Abdulelah A. Alqarzaee
  • Sujata S. Chaudhari
  • Mohammad Mazharul Islam
  • Vikas Kumar
  • Matthew C. Zimmerman
  • Rajib Saha
  • Kenneth W. Bayles
  • Frees, Dorte
  • Vinai C. Thomas

The transition from growth to stationary phase is a natural response of bacteria to starvation and stress. When stress is alleviated and more favorable growth conditions return, bacteria resume proliferation without a significant loss in fitness. Although specific adaptations that enhance the persistence and survival of bacteria in stationary phase have been identified, mechanisms that help maintain the competitive fitness potential of nondividing bacterial populations have remained obscure. Here, we demonstrate that staphylococci that enter stationary phase following growth in media supplemented with excess glucose, undergo regulated cell death to maintain the competitive fitness potential of the population. Upon a decrease in extracellular pH, the acetate generated as a byproduct of glucose metabolism induces cytoplasmic acidification and extensive protein damage in nondividing cells. Although cell death ensues, it does not occur as a passive consequence of protein damage. Instead, we demonstrate that the expression and activity of the ClpXP protease is induced, resulting in the degeneration of cellular antioxidant capacity and, ultimately, cell death. Under these conditions, inactivation of either clpX or clpP resulted in the extended survival of unfit cells in stationary phase, but at the cost of maintaining population fitness. Finally, we show that cell death from antibiotics that interfere with bacterial protein synthesis can also be partly ascribed to the corresponding increase in clpP expression and activity. The functional conservation of ClpP in eukaryotes and bacteria suggests that ClpP-dependent cell death and fitness maintenance may be a widespread phenomenon in these domains of life.

OriginalsprogEngelsk
Artikelnummere2109671118
TidsskriftProceedings of the National Academy of Sciences of the United States of America
Vol/bind118
Udgave nummer47
ISSN0027-8424
DOI
StatusUdgivet - 2021

Bibliografisk note

Funding Information:
ACKNOWLEDGMENTS. We thank Prof. Peter Zuber, Oregon Health & Science University, for generously providing us with anti-Spx antibodies. This work was financially supported by research grants from the National Institute of Allergy and Infectious Diseases P01 AI83211 (to K.W.B. and V.C.T.), R01-AI125589 (to K.W.B.), and R01 AI125588 (to V.C.T.); Nebraska Collaboration Initiative Seed Grant 21-1106-6009 (to R.S., K.W.B., and V.C.T.); and Qas-sim University postgraduate scholarship No. 167637 (to A.A.A.). The University of Nebraska Medical Center Mass Spectrometry and Proteomics Core Facility is administrated through the Office of the Vice-Chancellor for Research and supported by state funds from the Nebraska Research Initiative. The electron paramagnetic resonance spectroscopy core is supported, in part, by NIH Center of Biomedical Research Excellence Grant 1P30GM103335 awarded to the University of Nebraska’s Redox Biology Center. The funders had no role in study design, data collection, interpretation, and decision to submit this work for publication.

Publisher Copyright:
© 2021 National Academy of Sciences. All rights reserved.

ID: 286630269