Food Safety and Zoonoses

β-lactam resistance in methicillin-resistant Staphylococcus aureus USA300 is increased by inactivation of the ClpXP protease

Bæk, K. T., Gründling, A., Mogensen, R. G., Thøgersen, L., Petersen, A., Paulander, W. E. A. & Frees, Dorte, 2014, In: Antimicrobial Agents and Chemotherapy. 58, 8, p. 4593-4603 11 p.

Research output: Contribution to journal › Journal article › Research › peer-review

eHealth: Disease activity measures are related to the faecal gut microbiota in adult patients with ulcerative colitis

Ankersen, D. V., Weimers, P., Marker, D., Johannesen, T., Iversen, S., Lilje, B., Kristoffersen, A. B., Saboori, S., Paridaens, K., Skytt Andersen, P., Burisch, J. & Munkholm, Pia, 2020, In: Scandinavian Journal of Gastroenterology. 55, 11, p. 1291-1300

Research output: Contribution to journal › Journal article › Research › peer-review

Withdrawal time for sulfamethoxazole and trimethoprim following treatment of striped catfish (Pangasianodon hypophthalmus) and hybrid red tilapia (Oreochromis mossambicus × Oreochromis niloticus)

Phu, T. M., Scippo, M., Nguyen Thanh, P., Tien, C. T. K., Son, C. H. & Dalsgaard, Anders, 1 Feb 2015, In: Aquaculture. 437, p. 256-262 7 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Whole-genome sequence of the bacteriophage-sensitive strain Campylobacter jejuni NCTC12662

Gencay, Y. E., Sørensen, Martine Camilla Holst & Brøndsted, Lone, 2017, In: Genome Announcements. 5, 21, e00409-17.

Research output: Contribution to journal › Journal article › Research › peer-review

Whole-genome comparison of urinary pathogenic Escherichia coli and faecal isolates of UTI patients and healthy controls

Nielsen, K. L., Stegger, M., Kiil, K., Godfrey, P. A., Feldgarden, M., Lilje, B., Andersen, P. S. & Frimodt-Møller, N., Dec 2017, In: International Journal of Medical Microbiology. 307, 8, p. 497-507 11 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Whole strains vs MGEs in short and longterm transmission of ESBL genes between healthcare and community settings in Uganda

Hounmanou, Yaovi Mahuton Gildas, Wanyana, A., Alafi, S., Wabwire-mangen, F., Christensen, Henrik, Olsen, John Elmerdahl & Byarugaba, D. K., 2023, In: Scientific Reports. 13, 10229.

Research output: Contribution to journal › Journal article › Research › peer-review

What consumers expect from food control and what they get - A case study of the microbial quality of sushi bars in Denmark

Leisner, Jørgen, Lund, Thomas Bøker, Frandsen, E. A., Andersen, N. B. A., Fredslund, L., Nguyen, V. P. T. & Kristiansen, T., 2014, In: Food Control. 45, p. 76-80 5 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Wearing occlusive gloves increases the density of staphylococcus aureus in patients with hand eczema

Nørreslet, L. B., Edslev, S. M., Flachs, E. M., Ebbehøj, N. E., Andersen, P. S. & Agner, Tove, 2021, In: Acta Dermato-Venereologica. 101, 8, adv00515.

Research output: Contribution to journal › Journal article › Research › peer-review

Water used to moisten vegetables is a source of Escherichia coli and protozoan parasite contamination at markets in Hanoi, Vietnam

Nguyen, T. T. & Dalsgaard, Anders, 2014, In: Journal of Water and Health. 12, 4, p. 896-900 5 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Visualizing a complete Siphoviridae member by single-particle electron microscopy: the structure of lactococcal phage TP901-1

Bebeacua, C., Lai, L., Vegge, C. S., Brøndsted, Lone, van Heel, M., Veesler, D. & Cambillau, C., 2013, In: Journal of Virology. 87, 2, p. 1061-1068 8 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Viability of Ascaris suum eggs in stored raw and separated liquid slurry

Katakam, K. K., Roepstorff, A. K., Popovic, O., Kyvsgaard, N. C., Thamsborg, Stig Milan & Dalsgaard, Anders, 2013, In: Parasitology. 140, 3, p. 378-384 7 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Veterinary bacteriology in Denmark from the 1880s to 2022

Leisner, Jørgen & Larsen, J. L., 2024, In: APMIS. 132, 1, p. 31-42

Research output: Contribution to journal › Review › Research › peer-review

Veterinary and medical aspects of abortion in Danish sheep

Agerholm, Jørgen Steen, Aalbæk, Bent, Sandal, Anne Marie Fog, Boye, M., Holm, E., Jensen, Tim Kåre, Lindhardt, T., Larsen, L. E. & Boxton, D., 2006, In: Acta Pathologica Microbiologica et Immunologica Scandinavica. 114, 2, p. 146-152 7 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Vesikoamniotisk shunt-terapi ved føtal obstruktiv uropati

Nguyen, T. H., Thorup, Jørgen Mogens & Larsen, T., 23 Sep 1996, In: Ugeskrift for Laeger. 158, 39, p. 5463-4 2 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Varietal diversity and processing effects on the biochemical composition, cyanogenic glucoside potential (HCNp) and appearance of cassava flours from South-Eastern African region

Chiwona-Karltuna, L., Afoakwa, E. O., Nyirenda, D., Mwansa, C. N., Kongor, J. E. & Brimer, L., 2015, In: International Food Research Journal. 22, 3, p. 973-980 8 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Vancomycin resistance in Enterococcus faecium isolated from Danish chicken meat is located on a pVEF4-like plasmid persisting in poultry for 18 years

Leinweber, H., Alotaibi, S. M. I., Overballe-Petersen, S., Hansen, F., Hasman, H., Bortolaia, V., Hammerum, A. M. & Ingmer, Hanne, 2018, In: International Journal of Antimicrobial Agents. 52, 2, p. 283-286 4 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Vaccination mod almindeligt forekommende sygdomme - og betydningen for antibiotikaforbruget: Antibiotika-forbruget blandt besætninger, der opstartede vaccination, var højere inden opstart, sammenlignet med kontrolbesætninger. Men der var ikke et større fald i antibiotika-forbruget blandt de besætninger, der opstartede vaccination, sammenlignet med kontrolbesætninger.

Kruse, Amanda Brinch, Nielsen, Liza Rosenbaum, Alban, L. M. & Kristensen, C. S., 22 Jan 2019, In: Svin. 1901, p. 1-12 13 p., 1901.

Research output: Contribution to journal › Comment/debate › Communication

Vaccination against SARS-CoV-2 infection among vulnerable and marginalised population groups in Denmark: A nationwide population-based study

Nilsson, S. F., Laursen, T. M., Osler, Merete, Hjorthøj, Carsten, Benros, Michael Eriksen, Ethelberg, Steen, Mølbak, Kåre & Nordentoft, Merete, 2022, In: The Lancet Regional Health - Europe. 16, 14 p., 100355.

Research output: Contribution to journal › Journal article › Research › peer-review

Users’ perception of the OH-EpiCap evaluation tool based on its application to nine national antimicrobial resistance surveillance systems

Moura, P., Collineau, L., Sandberg, M., Tomassone, L., De Meneghi, D., Norström, M., Bennani, H., Häsler, B., Colomb-Cotinat, M., Bourély, C., Filippitzi, M. E., Mediouni, S., Boriani, E., Asaduzzaman, M., Caniça, M., Aenishaenslin, C. & Alban, L., 2023, In: Frontiers in Public Health. 11, 1138645.

Research output: Contribution to journal › Journal article › Research › peer-review

Use practices of antimicrobials and other compounds by shrimp and fish farmers in Northern Vietnam

Thi Kim Chi, T., Clausen, J. H., Van, P. T., Tersbøl, Britt Pinkowski & Dalsgaard, Anders, 2017, In: Aquaculture Reports. 7, p. 40-47 8 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Use of veterinary medicines, feed additives and probiotics in four major internationally traded aquaculture species farmed in Asia

Rico, A., Phu, T., Satapornvanit, K., Min, J., Shahabuddin, A. M., Henriksson, P. J. G., Murray, F. J., Little, D. C., Dalsgaard, Anders & Van den Brink, P. J., 2013, In: Aquaculture. 412–413, p. 231–243 13 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Use of WGS data for investigation of a long-term NDM-1-producing Citrobacter freundii outbreak and secondary in vivo spread of ^blaNDM-1 to Escherichia coli, Klebsiella pneumoniae and Klebsiella oxytoca

Hammerum, A. M., Hansen, F., Linde Nielsen, H., Jakobsen, L., Stegger, M., Andersen, P. S., Jensen, P., Nielsen, Tue Kjærgaard, Hansen, L. H., Hasman, H. & Fuglsang-Damgaard, D., Nov 2016, In: Journal of Antimicrobial Chemotherapy. 71, 11, p. 3117-3124 8 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Undersøgelse af ukrainsk- og russisktalende medarbejderes kendskab til smittebeskyttelse, hygiejne, medicinhåndtering og operative indgreb i danske svinebesætninger

Sydorova, T., Alban, L. M. & Nielsen, Liza Rosenbaum, 2020, In: Dansk Veterinaertidsskrift. 2020, 3, p. 16-21

Research output: Contribution to journal › Journal article › Research › peer-review

Undersøgelse af udbening af søer: Er det nødvendigt at udbene søer, hvor der findes tegn på tidligere tilstedeværelse af blodforgiftning?

Pedersen, T. Ø., Bækbo, A. K., Larsen, M. H., Petersen, J. V. & Alban, L. M., 2016, In: Dansk Veterinærtidsskrift. 2016, 7, p. 34-39 6 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Two-year intervention trial to control of fish-borne zoonotic trematodes in giant gourami (Osphronemus goramy) and striped catfish (Pangasianodon hypophthalmus) in nursery ponds in the Mekong Delta, Vietnam

Madsen, Henry, Thien, P. C., Nga, H. T. N., Clausen, J. H., Dalsgaard, Anders & Murrell, K. D., 21 Sep 2015, In: Acta Tropica. 152, p. 201-207 7 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Two Distinct Modes of Lysis Regulation in Campylobacter Fletchervirus and Firehammervirus Phages

Zampara, A., Ahern, S. J., Briers, Y., Brøndsted, Lone & Sørensen, Martine Camilla Holst, 2020, In: Viruses. 12, 11, 12 p., 1247.

Research output: Contribution to journal › Journal article › Research › peer-review

Treated wastewater reuse on potato (Solanum tuberosum)

Battilani, A., Plauborg, F., Andersen, M. N., Forslund, A., Ensink, J., Dalsgaard, Anders, Fletcher, T. & Solimando, D., 2014, In: Acta Horticulturae. 1038, p. 105-112 8 p.

Research output: Contribution to journal › Conference article › Research › peer-review

Trapping and proteomic identification of cellular substrates of the ClpP protease in Staphylococcus aureus

Feng, J., Michalik, S., Varming, A. N., Andersen, J. H., Albrecht, D., Jelsbak, L., Krieger, S., Ohlsen, K., Hecker, M., Gerth, U., Ingmer, Hanne & Frees, Dorte, 2013, In: Journal of Proteome Research. 12, 2, p. 547-558 12 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Transmission of antibiotic-resistant Escherichia coli between cattle, humans and the environment in peri-urban livestock keeping communities in Morogoro, Tanzania

Lupindu, A. M., Dalsgaard, Anders, Msoffe, P. L. M., Ngowi, H. A., Mtambo, M. M. & Olsen, John Elmerdahl, 2015, In: Preventive Veterinary Medicine. 118, 4, p. 477-482 6 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Transfer of Antibiotic Resistance in Staphylococcus aureus

Haaber, J., Penadés, J. R. & Ingmer, Hanne, 2017, In: Trends in Microbiology. 25, 11, 13 p., 893-905.

Research output: Contribution to journal › Journal article › Research › peer-review

Toxigenic Vibrio cholerae O1 in vegetables and fish raised in wastewater irrigated fields and stabilization ponds during a non-cholera outbreak period in Morogoro, Tanzania: an environmental health study

Hounmanou, Y. M. G., Mdegela, R. H., Dougnon, T. V., Mhongole, O. J., Mayila, E. S., Malakalinga, J., Makingi, G. & Dalsgaard, Anders, 18 Oct 2016, In: BMC Research Notes. 9, 1, p. 466 1 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Total synthesis and structural validation of cyclodepsipeptides solonamide A and B

Kitir, B., Baldry, M., Ingmer, Hanne & Olsen, C. A., 2014, In: Tetrahedron. 70, 42, p. 7721-7732 12 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Total dietary intake and health risks associated with exposure to aflatoxin B₁, ochratoxin A and fuminisins of children in Lao Cai Province, Vietnam

Huong, B. T. M., Tuyen, L. D., Madsen, Henry, Brimer, L., Friis, Henrik & Dalsgaard, Anders, 2019, In: Toxins. 11, 11, 19 p., 638.

Research output: Contribution to journal › Journal article › Research › peer-review

To pray in four directions: Understanding Vietnamese farmers' shrimp health management practices

Tran, K. C., Dalsgaard, Anders, Van, P. T. & Tersbøl, Britt Pinkowski, 2021, In: Aquaculture. 536, 736406.

Research output: Contribution to journal › Journal article › Research › peer-review

Time-lapse Imaging of Bacterial Swarms and the Collective Stress Response

Bru, J., Siryaporn, A. & Høyland-Kroghsbo, Nina Molin, 2020, In: Journal of visualized experiments : JoVE. 159, e60915.

Research output: Contribution to journal › Journal article › Research › peer-review

Tilapia lake virus threatens tilapiines farming and food security: Socio-economic challenges and preventive measures in Sub-Saharan Africa

Hounmanou, Yaovi Mahuton Gildas, Mdegela, R. H., Dougnon, T. V., Achoh, M. E., Mhongole, O. J., Agadjihouèdé, H., Gangbè, L. & Dalsgaard, Anders, 2018, In: Aquaculture. 493, p. 123-129 7 p.

Research output: Contribution to journal › Review › Research › peer-review

Tilapia (Oreochromis niloticus) as a Putative Reservoir Host for Survival and Transmission of Vibrio cholerae O1 Biotype El Tor in the Aquatic Environment

Hounmanou, Yaovi Mahuton Gildas, Mdegela, R. H., Dougnon, T. V., Madsen, Henry, Withey, J. H., Olsen, John Elmerdahl & Dalsgaard, Anders, 2019, In: Frontiers in Microbiology. 10, 14 p., 1215.

Research output: Contribution to journal › Journal article › Research › peer-review

Therapy of haematogenous osteomyelitis: a comparative study in a porcine model and Angolan children

Jensen, Louise Kruse, Koch, J., Kirketerp-Møller, K., Wamsler, O. J., Nielsen, O. L., Leifsson, Páll S., Frees, Dorte, Aalbæk, Bent & Jensen, Henrik Elvang, 2013, In: In Vivo. 27, 3, p. 305-312 8 p.

Research output: Contribution to journal › Journal article › Research › peer-review

The tombstones at the Monumental Cemetery of Milano select for a specialized microbial community

Gambino, Michela, Lepri, G., Štovícek, A., Ghazayarn, L., Villa, F., Gillor, O. & Cappitelli, F., 2021, In: International Biodeterioration and Biodegradation. 164, 105298.

Research output: Contribution to journal › Journal article › Research › peer-review

The sle1 cell wall amidase is essential for β-lactam resistance in community-acquired methicillin-resistant staphylococcus aureus USA300

Thalsø-Madsen, I., Torrubia, F. R., Xu, Lijuan, Petersen, A., Jensen, C. & Frees, Dorte, 2020, In: Antimicrobial Agents and Chemotherapy. 64, 1, 15 p., e01931-19.

Research output: Contribution to journal › Journal article › Research › peer-review

The role of the st313-td gene in virulence of Salmonella Typhimurium ST313

Herrero Fresno, A., Wallrodt, I., Leekitcharoenphon, P., Olsen, John Elmerdahl, Aarestrup, F. M. & Hendriksen, R. S., 2014, In: PLOS ONE. 9, 1, 11 p., e84566.

Research output: Contribution to journal › Journal article › Research › peer-review

The role of rice fields, fish ponds and water canals for transmission of fish-borne zoonotic trematodes in aquaculture ponds in Nam Dinh Province, Vietnam

Madsen, Henry, Dung, B. T., The, D. T., Viet, N. K., Dalsgaard, Anders & Van, P. T., 2015, In: Parasites & Vectors. 8, 11 p., 625.

Research output: Contribution to journal › Journal article › Research › peer-review

The role of Serpine-1 and Tissue inhibitor of metalloproteinase type-1 in early host responses to Staphylococcus aureus intracutaneous infection of mice

Harslund, J. L. F., Frees, Dorte, Leifsson, Páll S., Offenberg, H. K., Rømer, M. U. K., Brünner, N. & Olsen, John Elmerdahl, 2013, In: Pathogens and Disease. 68, 3, p. 96-104 9 p.

Research output: Contribution to journal › Journal article › Research › peer-review

The ribosomal protein uL22 modulates the shape of the nascent protein exit tunnel

Wekselman, I., Zimmerman, E., Davidovich, C., Rozenberg, H., Bashan, A., Friedlander, G., Kjeldgaard, J., Ingmer, Hanne, Lindahl, L., Zengel, J. & Yonath, A., 2017, In: FEBS Journal. 284, S1, p. 208-208

Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

The qacC Gene Has Recently Spread between Rolling Circle Plasmids of Staphylococcus, Indicative of a Novel Gene Transfer Mechanism

Wassenaar, T. M., Ussery, D. W. & Ingmer, Hanne, 27 Sep 2016, In: Frontiers in Microbiology. 7, 11 p., 1528.

Research output: Contribution to journal › Journal article › Research › peer-review

The putative thiosulfate sulfurtransferases PspE and GlpE contribute to virulence of Salmonella Typhimurium in the mouse model of systemic disease.

Wallrodt, I., Jelsbak, L., Thorndahl, L., Thomsen, Line Elnif, Lemire, S. & Olsen, John Elmerdahl, 2013, In: P L o S One. 8, 8, 9 p., e70829.

Research output: Contribution to journal › Journal article › Research › peer-review

The prevalence of staphylococcus aureus and the occurrence of mrsa cc398 in monkey feces in a zoo park in eastern China

Tang, Y., Qiao, Z., Wang, Z., Li, Y., Ren, J., Wen, L., Xu, X., Yang, J., Yu, C., Meng, C., Ingmer, Hanne, Li, Q. & Jiao, X., 2021, In: Animals. 11, 3, p. 1-8 8 p., 732.

Research output: Contribution to journal › Journal article › Research › peer-review

The prevalence and diversity of intestinal parasitic infections in humans and domestic animals in a rural Cambodian village

Schär, F., Inpankaew, T., Traub, R. J., Khieu, V., Dalsgaard, Anders, Chimnoi, W., Chhoun, C., Sok, D., Marti, H., Muth, S. & Odermatt, P., 2014, In: Parasitology International. 63, 4, p. 597-603 7 p.

Research output: Contribution to journal › Journal article › Research › peer-review

The menaquinone pathway is important for susceptibility of Staphylococcus aureus to the antibiotic adjuvant, cannabidiol

Wassmann, C. S., Rolsted, A. P., Lyngsie, M. C., Torres-Puig, S., Kronborg, T., Vestergaard, M., Ingmer, Hanne, Pontoppidan, S. P. & Klitgaard, J. K., 2022, In: Microbiological Research. 257, 126974.

Research output: Contribution to journal › Journal article › Research › peer-review

The lysine-peptoid hybrid LP5 maintain activity under physiological conditions and affects virulence gene expression in Staphylococcus aureus

Gottschalk, S., Ingmer, Hanne & Thomsen, Line Elnif, Apr 2016, In: Peptides. 78, p. 24-29

Research output: Contribution to journal › Journal article › Research › peer-review

The impact of inactivation of the purine biosynthesis genes, purN and purT, on growth and virulence in uropathogenic E. coli

Andersen-Civil, A. I. S., Ahmed, S., Guerra, Priscila Regina, Andersen, T. E., Hounmanou, Yaovi Mahuton Gildas, Olsen, John Elmerdahl & Herrero-Fresno, A., 2018, In: Molecular Biology Reports. 45, 6, p. 2707-2716 10 p.

Research output: Contribution to journal › Journal article › Research › peer-review

The genera of bacteriophages and their receptors are the major determinants of host range

Gencay, Y. E., Gambino, Michela, Prüssing, T. F. & Brøndsted, Lone, 2019, In: Environmental Microbiology. 21, 6, p. 2095-2111

Research output: Contribution to journal › Journal article › Research › peer-review

The food safety value of de-boning finishing pig carcasses with lesions indicative of prior septicaemia

Bækbo, A. K., Petersen, J. V., Larsen, M. H. & Alban, L. M., Nov 2016, In: Food Control. 69, p. 177-184

Research output: Contribution to journal › Journal article › Research › peer-review

The fear of awful smell: risk perceptions among farmers in Vietnam using wastewater and human excreta in agriculture

Knudsen, L. G., Phuc, P. D., Hiep, N. T., Samuelsen, Helle, Jensen, Peter Kjær, Dalsgaard, Anders, Raschid-Sally, L. & Konradsen, Flemming, Mar 2008, In: Southeast Asian Journal of Tropical Medicine and Public Health. 39, 2, p. 341-52 12 p.

Research output: Contribution to journal › Journal article › Research › peer-review

The expression signatures in liver and adipose tissue from obese Göttingen Minipigs reveal a predisposition for healthy fat accumulation

Cirera, Susanna, Taşöz, E., Juul Jacobsen, M., Schumacher-Petersen, Camilla, Østergaard Christoffersen, B., Kaae Kirk, R., Pagh Ludvigsen, T., Hvid, H., Duelund Pedersen, H., Olsen, Lisbeth Høier & Fredholm, Merete, 2020, In: Nutrition and Diabetes. 10, 1, 12 p., 9.

Research output: Contribution to journal › Journal article › Research › peer-review

The evolution of antimicrobial peptide resistance in Pseudomonas aeruginosa is shaped by strong epistatic interactions

Jochumsen, N., Marvig, R. L., Damkiaer, S., Jensen, R. L., Paulander, W., Molin, S., Jelsbak, L. & Folkesson, A., 3 Oct 2016, In: Nature Communications. 7, 10 p., 13002.

Research output: Contribution to journal › Journal article › Research › peer-review

The effectiveness of different intervention strategies for the prevention of zoonotic metacercariae infection in cultured fish

Clausen, J. H., Madsen, Henry, Murrell, K. D., Bui, T. N., Nguyen, N. T., Do, D. T., Thi, L. A. N., Manh, H. N. & Dalsgaard, Anders, 2013, In: Aquaculture. 416-417, p. 135-140 6 p.

Research output: Contribution to journal › Journal article › Research › peer-review

The association between meat inspection codes, footpad lesions and thinning of broiler flocks in the Danish broiler production

Alfifi, Ahmed Eassa H, Dalsgaard, Anders, Christensen, Jens Peter, Larsen, M. H. & Sandberg, M., 2020, In: Preventive Veterinary Medicine. 185, 105205.

Research output: Contribution to journal › Journal article › Research › peer-review

The antimicrobial lysine-peptoid hybrid LP5 inhibits DNA replication and induces the SOS response in Staphylococcus aureus

Gottschalk, S., Ifrah, D., Søndergaard, S. L., Gottlieb, C. T., Cohn, M. T., Hiasa, H., Hansen, Paul Robert, Gram, L., Ingmer, Hanne & Thomsen, Line Elnif, 2013, In: B M C Microbiology. 13, 8 p., 192.

Research output: Contribution to journal › Journal article › Research › peer-review

The Use of a Combined Bioinformatics Approach to Locate Antibiotic Resistance Genes on Plasmids From Whole Genome Sequences of Salmonella enterica Serovars From Humans in Ghana

Kudirkiene, E., Andoh, L. A., Ahmed, S., Herrero Fresno, A., Dalsgaard, Anders, Obiri-Danso, K. & Olsen, John Elmerdahl, 17 May 2018, In: Frontiers in Microbiology. 9, 14 p., 1010.

Research output: Contribution to journal › Journal article › Research › peer-review

The Tetracycline Resistance Gene, tet(W) in Bifidobacterium animalis subsp. lactis Follows Phylogeny and Differs From tet(W) in Other Species

Nøhr-Meldgaard, K., Struve, C., Ingmer, Hanne & Agersø, Marie Yvonne Feraren, 2021, In: Frontiers in Microbiology. 12, 658943.

Research output: Contribution to journal › Journal article › Research › peer-review

The Skin Microbiome in Atopic Dermatitis—a Potential Treatment Target?

Olesen, C. M., Clausen, M., Andersen, P. S. & Agner, Tove, 2018, In: Current Dermatology Reports. 7, 4, p. 199-208

Research output: Contribution to journal › Review › Research › peer-review

The Ribosomal Protein uL22 Modulates the Shape of the Protein Exit Tunnel

Wekselman, I., Zimmerman, E., Davidovich, C., Belousoff, M., Matzov, D., Krupkin, M., Rozenberg, H., Bashan, A., Friedlander, G., Kjeldgaard, J., Ingmer, Hanne, Lindahl, L., Zengel, J. M. & Yonath, A. E., 2017, In: Structure. 25, 8, p. 1233-1241.e3 13 p.

Research output: Contribution to journal › Journal article › Research › peer-review

The Novel Membrane-Associated Auxiliary Factors AuxA and AuxB Modulate β-lactam Resistance in MRSA by stabilizing Lipoteichoic Acids

Mikkelsen, K., Sirisarn, W., Alharbi, O., Alharbi, M., Liu, H., Nøhr-Meldgaard, K., Mayer, K., Vestergaard, M., Gallagher, L. A., Derrick, J. P., McBain, A. J., Biboy, J., Vollmer, W., O'Gara, J. P., Grunert, T., Ingmer, Hanne & Xia, G., 2021, In: International Journal of Antimicrobial Agents. 57, 3, 106283.

Research output: Contribution to journal › Journal article › Research › peer-review

The Incidence, Intensity, and Risk Factors for Soil Transmissible Helminthes Infections among Waste Handlers in a Large Coastal Periurban Settlement in Southern Ghana

Kretchy, J. P., Dzodzomenyo, M., Ayi, I., Dwomoh, D., Agyabeng, K., Konradsen, Flemming & Dalsgaard, Anders, 2021, In: Journal of Environmental and Public Health. 2021, 12 p., 5205793.

Research output: Contribution to journal › Journal article › Research › peer-review

The Economic Burden of Clostridioides difficile in Denmark: A Retrospective Cohort Study

Braae, U. C., Møller, F. T., Ibsen, R., Ethelberg, Steen, Kjellberg, J. & Mølbak, Kåre, 2020, In: Frontiers in Public Health. 8, 12 p., 562957.

Research output: Contribution to journal › Journal article › Research › peer-review

The Diverse Search for Synthetic, Semisynthetic and Natural Product Antibiotics From the 1940s and Up to 1960 Exemplified by a Small Pharmaceutical Player

Leisner, Jørgen, 2020, In: Frontiers in Microbiology. 11, 12 p., 976.

Research output: Contribution to journal › Review › Research › peer-review

The ClpXP protease is dispensable for degradation of unfolded proteins in Staphylococcus aureus

Stahlhut, S. G., Alqarzaee, A. A., Jensen, C., Fisker, N. S., Pereira, A. R., Pinho, M. G., Thomas, V. C. & Frees, Dorte, 2017, In: Scientific Reports. 7, 14 p., 11739.

Research output: Contribution to journal › Journal article › Research › peer-review

The ClpX chaperone controls autolytic splitting of Staphylococcus aureus daughter cells, but is bypassed by β-lactam antibiotics or inhibitors of WTA biosynthesis

Jensen, C., Bæk, K. T., Gallay, C., Thalsø-Madsen, I., Xu, Lijuan, Jousselin, A., Ruiz Torrubia, F., Paulander, W., Pereira, A. R., Veening, J. W., Pinho, M. G. & Frees, Dorte, 2019, In: PLOS Pathogens. 15, 9, 27 p., e1008044.

Research output: Contribution to journal › Journal article › Research › peer-review

The ClpX chaperone and a hypermorphic FtsA variant with impaired self-interaction are mutually compensatory for coordinating Staphylococcus aureus cell division

Henriksen, C., Bæk, K. T., Wacnik, K., Gallay, C., Veening, J. W., Foster, S. J. & Frees, Dorte, 2024, In: Molecular Microbiology. 121, 1, p. 98-115

Research output: Contribution to journal › Journal article › Research › peer-review

The Cell Wall Polymer Lipoteichoic Acid Becomes Nonessential in Staphylococcus aureus Cells Lacking the ClpX Chaperone

Baek, K. T., Bowman, L., Millership, C., Sogaard, M. D., Kaever, V., Siljamaki, P., Savijoki, K., Varmanen, P., Nyman, T. A., Grundling, A. & Frees, Dorte, 2016, In: mBio (Print). 7, 4, 11 p., 01228.

Research output: Contribution to journal › Journal article › Research › peer-review

The Bacillus phage SPβ and its relatives: a temperate phage model system reveals new strains, species, prophage integration loci, conserved proteins and lysogeny management components

Kohm, K., Floccari, V. A., Lutz, Veronika Theresa, Nordmann, B., Mittelstädt, C., Poehlein, A., Dragoš, A., Commichau, F. M. & Hertel, R., 2022, In: Environmental Microbiology. 24, 4, p. 2098-2118 21 p.

Research output: Contribution to journal › Journal article › Research › peer-review

The agr quorum sensing system in Staphylococcus aureus cells mediates death of sub-population

Paulander, W. E. A., Varming, A. N., Bojer, Martin Saxtorph, Friberg, C., Bæk, K. T. & Ingmer, Hanne, 24 Jul 2018, In: BMC Research Notes. 11, 5 p., 503.

Research output: Contribution to journal › Journal article › Research › peer-review

The agr inhibitors solonamide B and analogues alter immune responses to Staphylococccus aureus but do not exhibit adverse effects on immune cell functions

Baldry, M., Kitir, B., Frøkiær, Hanne, Christensen, S. B., Taverne, N., Meijerink, M., Franzyk, Henrik, Olsen, Christian Adam, Wells, J. M. & Ingmer, Hanne, 2016, In: P L o S One. 11, 1, 17 p., e0145618.

Research output: Contribution to journal › Journal article › Research › peer-review

Temporal variation of Staphylococcus aureus clonal complexes in atopic dermatitis: a follow-up study

Clausen, M., Edslev, S. M., Nørreslet, L. B., Sørensen, J. A., Andersen, P. S. & Agner, Tove, Jan 2019, In: British Journal of Dermatology. 180, 1, p. 181-186 6 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Temperate Phages of Staphylococcus aureus

Ingmer, Hanne, Gerlach, D. & Wolz, C., 2019, In: Microbiology Spectrum. 7, 5, p. 1-18

Research output: Contribution to journal › Journal article › Research › peer-review

Teaching minority children hygiene: investigating hygiene education in kindergartens and homes of ethnic minority children in northern Vietnam

Vildekilde, Thilde, Samuelsen, Helle, Dalsgaard, Anders & Konradsen, Flemming, 2015, In: Ethnicity and Health. 20, 3, p. 258-272 15 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Teaching handwashing with soap for schoolchildren in a multi-ethnic population in northern rural Vietnam

Le Thi Thanh, X., Vildekilde, Thilde, Luu Ngoc, H., Dalsgaard, Anders & Konradsen, Flemming, 2013, In: Global Health Action. 6, 12 p., 63.

Research output: Contribution to journal › Journal article › Research › peer-review

Targeting the ATP synthase in bacterial and fungal pathogens: beyond Mycobacterium tuberculosis

Vestergaard, M., Bald, D. & Ingmer, Hanne, 2022, In: Journal of Global Antimicrobial Resistance. 29, p. 29-41 13 p.

Research output: Contribution to journal › Review › Research › peer-review

Targeting the ATP synthase in Staphylococcus aureus small colony variants, Streptococcus pyogenes and pathogenic fungi

Vestergaard, M., Roshanak, S. & Ingmer, Hanne, 2021, In: Antibiotics. 10, 4, 376.

Research output: Contribution to journal › Journal article › Research › peer-review

Synthesis and Antimicrobial Properties of a Ciprofloxacin and PAMAM-dendrimer Conjugate

Svenningsen, Søren Wedel, Frederiksen, R. F., Counil, C., Ficker, M., Leisner, Jørgen & Christensen, Jørn Bolstad, 2020, In: Molecules. 25, 6, p. 1-13 1389.

Research output: Contribution to journal › Journal article › Research › peer-review

Susceptibility of vancomycin-resistant and –sensitive Enterococcus faecium obtained from Danish hospitals to benzalkonium chloride, chlorhexidine and hydrogen eroxide biocides

Alotaibi, S. M. I., Ayibiekea, A., Pedersen, A. F., Jakobsen, L., Pinholt, M., Gumpert, H., Hammerum, A. M., Westh, Henrik T. & Ingmer, Hanne, Dec 2017, In: Journal of Medical Microbiology. 66, 12, p. 1744-1751 8 p., 000642.

Research output: Contribution to journal › Journal article › Research › peer-review

Survival of hospital- and community-associated Enterococcus faecium following exposure to in-use concentrations of the biocide sodium dichloroisocyanurate (NaDCC)

Skive, Bolette, Lawaetz, A. C., Hammerum, A. M., Hasman, H., Pinholt, M., Jensen, C. S., Knudsen, J. D., Kjerulf, A. & Ingmer, Hanne, 2022, In: Journal of Global Antimicrobial Resistance. 29, p. 281-288 8 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Survival of Salmonella spp. and fecal indicator bacteria in Vietnamese biogas digesters receiving pig slurry

Luu, H. Q., Forslund, A., Madsen, Henry & Dalsgaard, Anders, 2014, In: International Journal of Hygiene and Environmental Health. 217, 7, p. 785-795 11 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Survival of Ascaris suum and Ascaridia galli eggs in liquid manure at different ammonia concentrations and temperatures

Katakam, K. K., Mejer, Helena, Dalsgaard, Anders, Kyvsgaard, N. C. & Thamsborg, Stig Milan, 2014, In: Veterinary Parasitology. 204, 3-4, p. 249-257 9 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Surveillance of surgical site infection in a teaching hospital in Ghana: a prospective cohort study

Bediako-Bowan, A., Owusu, E., Debrah, S., Kjerulf, A., Newman, M. J., Kurtzhals, Jørgen & Mølbak, Kåre, 2020, In: Journal of Hospital Infection. 104, 3, p. 321-327

Research output: Contribution to journal › Journal article › Research › peer-review

Surveillance and Genomics of Toxigenic Vibrio cholerae O1 From Fish, Phytoplankton and Water in Lake Victoria, Tanzania

Hounmanou, Yaovi Mahuton Gildas, Leekitcharoenphon, P., Hendriksen, R. S., Dougnon, T. V., Mdegela, R. H., Olsen, John Elmerdahl & Dalsgaard, Anders, 2019, In: Frontiers in Microbiology. 10, 15 p., 901.

Research output: Contribution to journal › Journal article › Research › peer-review

Subtypes of tail spike proteins predicts the host range of Ackermannviridae phages

Sørensen, Anders Nørgaard, Woudstra, Cedric Folkert Julien, Sørensen, Martine Camilla Holst & Brøndsted, Lone, 2021, In: Computational and Structural Biotechnology Journal. 19, p. 4854-4867 14 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Structure-activity relationship study based on Autoinducing Peptide (AIP) from dog pathogen S. schleiferi

Gless, B. H., Peng, P., Pedersen, K. D., Gotfredsen, C. H., Ingmer, Hanne & Olsen, Christian Adam, 2017, In: Organic Letters. 19, 19, p. 5276–5279

Research output: Contribution to journal › Letter › Research › peer-review

Structure and Function of the Branched Receptor-Binding Complex of Bacteriophage CBA120

Plattner, M., Shneider, M. M., Arbatsky, N. P., Shashkov, A. S., Chizhov, A. O., Nazarov, S., Prokhorov, N. S., Taylor, Nicholas M I, Buth, S. A., Gambino, Michela, Gencay, Y. E., Brøndsted, Lone, Kutter, E. M., Knirel, Y. A. & Leiman, P. G., 2019, In: Journal of Molecular Biology. 431, 19, p. 3718-3739

Research output: Contribution to journal › Journal article › Research › peer-review

Structural elucidation and partial synthesis of 3-hydroxyheterodendrin, a cyanogenic glucoside from Acacia sieberiana var. woodii

Brimer, L., Christensen, Søren Brøgger, Jaroszewski, J. W. & Nartey, F., 1981, In: Phytochemistry. 20, 9, p. 2221-2223 3 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Structural basis for (p)ppGpp synthesis by the Staphylococcus aureus small alarmone synthetase RelP

Manav, M. C., Beljantseva, J., Bojer, Martin Saxtorph, Tenson, T., Ingmer, Hanne, Hauryliuk, V. & Brodersen, D. E., 2018, In: The Journal of Biological Chemistry. 293, 9, p. 3254-3264 11 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Streptokinase Treatment Reverses Biofilm-Associated Antibiotic Resistance in Staphylococcus aureus

Jørgensen, N. P., Zobek, N., Dreier, C., Haaber, J. K., Ingmer, Hanne, Larsen, O. H. & Meyer, R. L., 20 Sep 2016, In: Microorganisms. 4, 3, 12 p., 36.

Research output: Contribution to journal › Journal article › Research › peer-review

Strategies for developing phages into novel antimicrobial tailocins

Woudstra, Cedric Folkert Julien, Sørensen, Anders Nørgaard, Sørensen, Martine Camilla Holst & Brøndsted, Lone, 2024, (E-pub ahead of print) In: Trends in Microbiology.

Research output: Contribution to journal › Review › Research › peer-review

Stepwise decrease in daptomycin susceptibility in clinical Staphylococcus aureus isolates associated with an initial mutation in rpoB and a compensatory inactivation of the clpX gene

Bæk, K. T., Thøgersen, L., Mogensen, R. G., Pedersen, M. M., Thomsen, Line Elnif, Petersen, A., Skov, Søren, Cameron, D. R., Peleg, A. Y. & Frees, Dorte, Nov 2015, In: Antimicrobial Agents and Chemotherapy. 59, 11, p. 6983-6991 9 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Staphylococcus aureus colonization in atopic eczema and its association with filaggrin gene mutations

Clausen, M. L., Edslev, S. M., Andersen, P. S., Clemmensen, K., Krogfelt, K. A. & Agner, Tove, Nov 2017, In: British Journal of Dermatology. 177, 5, p. 1394-1400 7 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Staphylococcal communities on skin are associated with atopic dermatitis and disease severity.

Edslev, S. M., Olesen, C. M., Nørreslet, L. B., Ingham, A. C., Iversen, S., Lilje, B., Clausen, M. L., Jensen, J. S., Stegger, M., Agner, Tove & Andersen, P. S., 2021, In: Microorganisms. 9, 2, p. 1-17 17 p., 432.

Research output: Contribution to journal › Journal article › Research › peer-review

Staphylococcal Phages Adapt to New Hosts by Extensive Attachment Site Variability

Leinweber, H., Sieber, R. N., Larsen, J., Stegger, M. & Ingmer, Hanne, 2021, In: mBio. 12, 6, e02259-21.

Research output: Contribution to journal › Journal article › Research › peer-review

Staphylococcal ClpXP protease targets the cellular antioxidant system to eliminate fitness-compromised cells in stationary phase

Alqarzaee, A. A., Chaudhari, S. S., Islam, M. M., Kumar, V., Zimmerman, M. C., Saha, R., Bayles, K. W., Frees, Dorte & Thomas, V. C., 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 47, e2109671118.

Research output: Contribution to journal › Journal article › Research › peer-review

Stability of plasmids in five strains of Salmonella maintained in stab culture at different temperatures

Olsen, John Elmerdahl, Brown, D. J., Baggesen, D. L. & Bisgaard, M., Aug 1994, In: Journal of Applied Bacteriology. 77, 2, p. 155-159 5 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Spread of avian pathogenic Escherichia coli ST117 O78:H4 in Nordic broiler production

Ronco, T., Stegger, M., Olsen, Rikke Heidemann, Sekse, C., Nordstoga, A. B., Pohjanvirta, T., Lilje, B., Lyhs, U., Andersen, P. S. & Pedersen, K., 3 Jan 2017, In: BMC Genomics. 18, 8 p., 13.

Research output: Contribution to journal › Journal article › Research › peer-review

Spontaneous fermentation mitigates the frequency of genes encoding antimicrobial resistance spreading from the phyllosphere reservoir to the diet

Luo, X., Hounmanou, Yaovi Mahuton Gildas, Ndayisenga, F. & Yu, Z., 2024, In: Science of the Total Environment. 931, 15 p., 172712.

Research output: Contribution to journal › Journal article › Research › peer-review

Spontaneous Phage Resistance in Avian Pathogenic Escherichia coli

Sørensen, P. E., Baig, S., Stegger, M., Ingmer, Hanne, Garmyn, A. & Butaye, P., 2021, In: Frontiers in Microbiology. 12, 782757.

Research output: Contribution to journal › Journal article › Research › peer-review

Specific detection of pathogenic yersinia enterocolitica by two-step pcr using hot-start and dmso

Rasmussen, H. N., Rasmussen, O. F., Andersen, J. K. & Olsen, John Elmerdahl, Apr 1994, In: Molecular and Cellular Probes. 8, 2, p. 99-108 10 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Sources and fate of antimicrobials in integrated fish-pig and non-integrated tilapia farms

Li, K., Liu, L., Zhan, J., Scippo, M. L., Hvidtfeldt, K., Liu, Y. & Dalsgaard, Anders, 2017, In: Science of the Total Environment. 595, p. 393-399 7 p.

Research output: Contribution to journal › Journal article › Research › peer-review

SosA inhibits cell division in Staphylococcus aureus in response to DNA damage

Bojer, Martin Saxtorph, Wacnik, K., Kjelgaard, P., Gallay, C., Bottomley, A. L., Cohn, M. T., Lindahl, G., Frees, Dorte, Veening, J. W., Foster, S. J. & Ingmer, Hanne, 2019, In: Molecular Microbiology. 112, 4, p. 1116-1130

Research output: Contribution to journal › Journal article › Research › peer-review

SosA in Staphylococci: an addition to the paradigm of membrane-localized, SOS-induced cell division inhibition in bacteria

Bojer, Martin Saxtorph, Frees, Dorte & Ingmer, Hanne, 2020, In: Current Genetics. 66, p. 495-499

Research output: Contribution to journal › Review › Research › peer-review

Soluble C-Type Lectin-Receptor Ligands Stimulate ROS Production in Dendritic Cells and Potentiate Killing of MRSA as Well as the MRSA Induced IL-12 Production

Eld, H. M. S., Johnsen, Peter Riber, Nielsen, E. M., Jørgensen, F. Z., Lindstrøm-Svendsen, M., Baldry, M., Ingmer, Hanne & Frøkiær, Hanne, 2022, In: Frontiers in Immunology. 13, 845881.

Research output: Contribution to journal › Journal article › Research › peer-review

Solonamide B inhibits quorum sensing and reduces Staphylococcus aureus mediated killing of human neutrophils

Nielsen, A., Månsson, M., Bojer, Martin Saxtorph, Gram, L., Larsen, T. O., Novick, R. P., Frees, Dorte, Frøkiær, Hanne & Ingmer, Hanne, 2014, In: P L o S One. 9, 1, p. e84992 10 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Smell: An overlooked factor in sanitation promotion

Vildekilde, Thilde, Keraita, B., Konradsen, Flemming, Samuelsen, Helle & Dalsgaard, Anders, Apr 2013, In: Waterlines. 32, 2, p. 106-112 7 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Skin microbiome in atopic dermatitis

Edslev, S. M., Agner, Tove & Andersen, P. S., 2020, In: Acta Dermato-Venereologica. 100, 100-year theme Atopic dermatitis, p. 358-366 9 p., adv00164.

Research output: Contribution to journal › Review › Research › peer-review

Simple method for correct enumeration of Staphylococcus aureus

Haaber, J., Cohn, M. T., Petersen, A. & Ingmer, Hanne, Jun 2016, In: Journal of Microbiological Methods. 125, p. 58-63

Research output: Contribution to journal › Journal article › Research › peer-review

Simple fecal flotation is a superior alternative to guadruple Kato Katz smear examination for the detection of hookworm eggs in human stool

Inpankaew, T., Schär, F., Khieu, V., Muth, S., Dalsgaard, Anders, Marti, H., Traub, R. J. & Odermatt, P., 2014, In: P L o S Neglected Tropical Diseases (Online). 8, 12, 6 p., e3313.

Research output: Contribution to journal › Journal article › Research › peer-review

Significance of phage-host interactions for biocontrol of Campylobacter jejuni in food

Athina, Z., Sørensen, Martine Camilla Holst, Elsser-Gravesen, A. & Brøndsted, Lone, 2017, In: Food Control. 73, Part B, p. 1169-1175

Research output: Contribution to journal › Journal article › Research › peer-review

Sex-differences in COVID-19 associated excess mortality is not exceptional for the COVID-19 pandemic

Nielsen, J., Nørgaard, S. K., Lanzieri, G., Vestergaard, L. S. & Mølbak, Kåre, 2021, In: Scientific Reports. 11, 9 p., 20815.

Research output: Contribution to journal › Journal article › Research › peer-review

Severity of respiratory tract infections depends on the infectious dose. Perspectives for the next pandemic

Mølbak, Kåre, Sørensen, Thorkild I.A., Bhatt, Samir, Lyngse, Frederik Plesner, Simonsen, L. & Aaby, P., 2024, In: Frontiers in Public Health. 12, 4 p., 1391719.

Research output: Contribution to journal › Journal article › Research › peer-review

Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Infection Fatality Rate among Elderly Danes: A Cross-sectional Study on Retired Blood Donors

Pedersen, O. B., Nissen, J., Dinh, K. M., Schwinn, M., Kaspersen, K. A., Boldsen, J. K., Didriksen, M., Dowsett, J., Sørensen, E., Thørner, L. W., Larsen, M. A. H., Grum-Schwensen, B., Sækmose, S., Paulsen, I. W., Frisk, N. L. S., Brodersen, T., Vestergaard, L. S., Rostgaard, K., Mølbak, K., Skov, R. L. & 3 others, Erikstrup, C., Ullum, H. & Hjalgrim, Henrik, 2021, In: Clinical Infectious Diseases. 73, 9, p. E2962-E2969

Research output: Contribution to journal › Journal article › Research › peer-review

Seroprevalence of Toxoplasma gondii infection in sows and finishers from conventional and organic herds in Denmark: implications for potential future serological surveillance

Olsen, Abbey , Sandberg, M., Houe, Hans, Nielsen, H. V., Denwood, Matt, Jensen, T. B. & Alban, L., 2020, In: Preventive Veterinary Medicine. 185, 10 p., 105149.

Research output: Contribution to journal › Journal article › Research › peer-review

Screening for mutations and polymorphisms in the genes KCNH2 and KCNE2 encoding the cardiac HERG/MiRPI ion channel: Implications for acquired and congenital long Q-T syndrome

Larsen, Lars Allan, Andersen, P. S., Kanters, Jørgen K., Svendsen, I. H., Jacobsen, J. R., Vuust, J., Wettrell, G., Tranebjærg, Lisbeth, Bathen, J. & Christiansen, M., 6 Aug 2001, In: Clinical Chemistry. 47, 8, p. 1390-1395 6 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Screening for Highly Transduced Genes in Staphylococcus aureus Revealed Both Lateral and Specialized Transduction

Bowring, Janine Zara, Su, Y., Alsaadi, Ahlam Musaibeh M, Svenningsen, Sine Lo, Parkhill, J. & Ingmer, Hanne, 2022, In: Microbiology Spectrum. 10, 1, e02423-21.

Research output: Contribution to journal › Journal article › Research › peer-review

Screening for Bacillus subtilis group isolates that degrade cyanogens at pH 4.5-5.0.

Abban, S., Brimer, L., Abdelgadir, W. S., Jakobsen, M. & Thorsen, L., 2013, In: International Journal of Food Microbiology. 161, 1, p. 31-35 5 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Scientists’ Assessments of Research on Lactic Acid Bacterial Bacteriocins 1990–2010

Martinenghi, Laura Daniela & Leisner, Jørgen, 2022, In: Frontiers in Microbiology. 13, 908336.

Research output: Contribution to journal › Journal article › Research › peer-review

Salmonella enterica serovar Gallinarum biovar gallinarum in layers: Epidemiological investigations of a recent outbreak in Denmark

Christensen, Jens Peter & Skov, M. N., 1 Sep 1994, In: Avian Pathology. 23, 3, p. 489-501 13 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Salmonella enterica: Infection, Cross Infection and Persistence within the Environment of a Broiler Parent Stock Unit in Denmark

Brown, D. J., Olsen, John Elmerdahl & Bisgaard, M., 1992, In: Zentralblatt fur Bakteriologie. 277, 1, p. 129-138 10 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Salmonella Weltevreden in integrated and non-integrated tilapia aquaculture systems in Guangdong, China

Li, K., Petersen, G., Barco, L., Hvidtfeldt, K., Liu, L. & Dalsgaard, Anders, Aug 2017, In: Food Microbiology. 65, p. 19-24

Research output: Contribution to journal › Journal article › Research › peer-review

SWOT analysis of risk factors associated with introduction of African Swine Fever through vehicles returning after export of pigs

Gao, Y., Nielsen, L. H., Boklund, Anette, de Jong, M. C. M. & Alban, L., 2023, In: Frontiers in Veterinary Science. 9, 1049940.

Research output: Contribution to journal › Journal article › Research › peer-review

Risks for fishborne zoonotic trematodes in tilapia production systems in Guangdong province, China

Li, K., Clausen, J. H., Murrell, K. D., Liu, L. & Dalsgaard, Anders, 2013, In: Veterinary Parasitology. 198, 1-2, p. 223-229 7 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Risk-based surveillance for meat-borne parasites

Alban, L., Häsler, B., van Schaik, G. & Ruegg, S., 2020, In: Experimental Parasitology. 208, 107808.

Research output: Contribution to journal › Review › Research › peer-review

Risk-based meat inspection and integrated meat safety assurance

Blagojevic, B. & Alban, L., 2024, In: Food Control. 157, 3 p., 110183.

Research output: Contribution to journal › Editorial › Research

Risk of hospitalization and death within 2 years after methicillin-resistant Staphylococcus aureus (MRSA) diagnosis in persons colonized or infected with livestock and non–livestock-associated MRSA—A nationwide register-based cohort study

Holten Møller, C., Andersson, M., Rhod Larsen, A., Petersen, A., Mølbak, Kåre & Koch, A., 2020, In: Zoonoses and Public Health. 67, 7, p. 814-822 9 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Risk of hospitalisation associated with infection with SARS-CoV-2 omicron variant versus delta variant in Denmark: an observational cohort study

Bager, P., Wohlfahrt, J., Bhatt, S., Stegger, M., Legarth, R., Møller, C. H., Skov, R. L., Valentiner-Branth, P., Voldstedlund, M., Fischer, T. K., Simonsen, L., Kirkby, N. S., Thomsen, M. K., Spiess, K., Marving, E., Larsen, N. B., Lillebaek, T., Ullum, H., Mølbak, K., Krause, T. G. & 28 others, Edslev, S. M., Sieber, R. N., Ingham, A. C., Overvad, M., Agermose Gram, M., Kristensen Lomholt, F., Hallundbæk, L., Hjorth Espensen, C., Gubbels, S., Karakis, M., Lauenborg Møller, K., Schytte Olsen, S., Harboe, Zitta F B Barrella, Klint Johannesen, C., van Wijhe, M., Holler, J. G., Dessau, R. B. C., Barfred Friis, M., Fuglsang-Damgaard, D., Pinholt, M., Vognbjerg Sydenham, T., Coia, J. E., Marmolin, E. S., Fomsgaard, A., Fonager, J., Rasmussen, M., Cohen, A. & the Omicron-Delta study group, T. O. S. G., 2022, In: The Lancet Infectious Diseases. 22, 7, p. 967-976 10 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Risk of hospitalisation associated with infection with SARS-CoV-2 lineage B.1.1.7 in Denmark: an observational cohort study

Bager, P., Wohlfahrt, J., Fonager, J., Rasmussen, M., Albertsen, M., Michaelsen, T. Y., Møller, C. H., Ethelberg, Steen, Legarth, R., Button, M. S. F., Gubbels, S., Voldstedlund, M., Mølbak, Kåre, Skov, R. L., Fomsgaard, A., Krause, T. G. & The Danish Covid-19 Genome Consortium, T. D. C. G. C., 2021, In: The Lancet Infectious Diseases. 21, 11, p. 1507-1517 11 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Risk of faecal pollution among waste handlers in a resource-deprived coastal peri-urban settlement in Southern Ghana

Kretchy, J. P., Dzodzomenyo, M., Ayi, I., Dwomoh, D., Agyabeng, K., Konradsen, Flemming & Dalsgaard, Anders, 2020, In: PLoS ONE. 15, 15 p., e0239587.

Research output: Contribution to journal › Journal article › Research › peer-review

Risk factors for surgical site infections in abdominal surgeries in Ghana: Emphasis on the impact of operating rooms door openings

Bediako-Bowan, A. A. A., Mølbak, Kåre, Kurtzhals, Jørgen, Owusu, E., Debrah, S. & Newman, M. J., 2020, In: Epidemiology and Infection. 148, 5 p., e147.

Research output: Contribution to journal › Journal article › Research › peer-review

Risk factors for infection with highly pathogenic influenza A virus (H5N I) in commercial chickens in Bangladesh

Biswas, P. K., Christensen, Jens Peter, Ahmed, S. S. U., Barua, H., Das, A., Rahman, M. H., Giasuddin, M., Hannan, A. S. M. A., Habib, A. M. & Debnath, N. C., 13 Jun 2009, In: Veterinary Record. 164, 24, p. 743-746 4 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Rifampin Resistance rpoB Alleles or Multicopy Thioredoxin/Thioredoxin Reductase Suppresses the Lethality of Disruption of the Global Stress Regulator spx in Staphylococcus aureus

Villanueva, M., Jousselin, A., Baek, K. T., Prados, J., Andrey, D. O., Renzoni, A., Ingmer, Hanne, Frees, Dorte & Kelley, W. L., 1 Oct 2016, In: Journal of Bacteriology. 198, 19, p. 2719-2731 13 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Ribotyping of Aeromonas salmonicida subsp. salmonicida

Nielsen, B., Olsen, John Elmerdahl & Larsen, J. L., 1994, In: Diseases of Aquatic Organisms. 18, 2, p. 155-158 4 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Ribotypes of Salmonella enterica serovar Gallinarum biovars gallinarum and pullorum

Christensen, Jens Peter, Olsen, John Elmerdahl & Bisgaard, M., 1 Dec 1993, In: Avian Pathology. 22, 4, p. 725-738 14 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Ribosomal dimerization factor YfiA is the major protein synthesized after abrupt glucose depletion in Lactococcus lactis

Breüner, A., Frees, Dorte, Varmanen, P., Boguta, A. M., Hammer, K., Martinussen, J. & Kilstrup, M., Oct 2016, In: Microbiology. 162, 10, p. 1829-1839 11 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Review and phylogenetic analysis of qac genes that reduce susceptibility to quaternary ammonium compounds in Staphylococcus species

Wassenaar, T. M., Ussery, D., Nielsen, L. N. & Ingmer, Hanne, Mar 2015, In: European Journal of Microbiology and Immunology (Print). 5, 1, p. 44-61 18 p.

Research output: Contribution to journal › Review › Research › peer-review

Reversible antibiotic tolerance induced in Staphylococcus aureus by concurrent drug exposure

Haaber, J. K., Friberg, C., McCreary, M., Lin, R., Cohen, S. N. & Ingmer, Hanne, 2015, In: mBio. 6, 1, 9 p., e02268-14.

Research output: Contribution to journal › Journal article › Research › peer-review

Resveratrol enhances the efficacy of aminoglycosides against Staphylococcus aureus

Nøhr-Meldgaard, K., Ovsepian, A., Ingmer, Hanne & Vestergaard, M., Sep 2018, In: International Journal of Antimicrobial Agents. 52, 3, p. 390-396

Research output: Contribution to journal › Journal article › Research › peer-review

Research note: Detection of Salmonella in minced meat by the polymerase chain reaction method

Aabo, S., Andersen, J. K. & Olsen, John Elmerdahl, Sep 1995, In: Letters in Applied Microbiology. 21, 3, p. 180-182 3 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Research note: Occurrence of mcr-encoded colistin resistance in Escherichia coli from pigs and pig farm workers in Vietnam

Dang, S. T. T., Truong, D. T. Q., Olsen, John Elmerdahl, Tran, N. T., Truong, G. T. H., Vu, H. T. K. & Dalsgaard, Anders, 2020, In: FEMS Microbes. 1, 1, 6 p., xtaa003.

Research output: Contribution to journal › Journal article › Research › peer-review

Reply to "Tolerance' of misused terminology? enforcing standardized phenotypic definitions": Enforcing standardized phenotypic definitions"

Haaber, J. K., Ingmer, Hanne & Cohen, S. N., May 2015, In: mBio. 6, 3, e00567-15.

Research output: Contribution to journal › Comment/debate › Research › peer-review

Removal of the phage-shock protein PspB causes reduction of virulence in Salmonella enterica serovar Typhimurium independently of NRAMP1

Wallrodt, I., Jelsbak, L., Thomsen, Line Elnif, Brix, L., Lemire, S., Gautier, L., Nielsen, Dennis Sandris, Jovanovic, G., Buck, M. & Olsen, John Elmerdahl, 2014, In: Journal of Medical Microbiology. 63, 6, p. 788-795 8 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Removal of Cryptosporidium parvum oocysts in low quality water using Moringa oleifera seed extract as coagulant

Petersen, H. H., Petersen, T. B., Enemark, H. L., Olsen, A. & Dalsgaard, Anders, Mar 2016, In: Food and Waterborne Parasitology. 3, p. 1-8 8 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Reinfection of dogs with fish-borne zoonotic trematodes in Northern Vietnam following a single treatment with praziquantel

Nissen, S., Nguyen, L. A. T., Thamsborg, Stig Milan, Dalsgaard, Anders & Johansen, M. V., 2014, In: P L o S Neglected Tropical Diseases (Online). 8, 1, 5 p., e2625.

Research output: Contribution to journal › Journal article › Research › peer-review

Regulation of host hemoglobin binding by the Staphylococcus aureus Clp proteolytic system

Farrand, A. J., Reniere, M. L., Ingmer, Hanne, Frees, Dorte & Skaar, E. P., 2013, In: Journal of Bacteriology. 195, 22, p. 5041-5050 10 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Redistribution and persistence of microorganisms and steroid hormones after soil-injection of swine slurry

Amin, M., Bech, T. B., Forslund, A., Hansen, M., Petersen, S. O. & Lægdsmand, M., 2014, In: The Science of the Total Environment. 466-467, p. 1003-1010 8 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Rectal Colonization and Nosocomial Transmission of Carbapenem-Resistant Acinetobacter baumannii in an Intensive Care Unit, Southwest Nigeria

Odih, Erkison Ewomazino, Irek, E. O., Obadare, T. O., Oaikhena, A. O., Afolayan, A. O., Underwood, A., Adenekan, A. T., Ogunleye, V. O., Argimon, S., Dalsgaard, Anders, Aanensen, D. M., Okeke, I. N. & Aboderin, A. O., 2022, In: Frontiers in Medicine. 9, 846051.

Research output: Contribution to journal › Journal article › Research › peer-review

Recently introduced qacA/B genes in Staphylococcus epidermidis do not increase chlorhexidine MIC/MBC

Skovgaard, S., Larsen, M. H., Nielsen, L. N., Skov, R. L., Wong, C., Westh, Henrik T. & Ingmer, Hanne, 2013, In: The Journal of antimicrobial chemotherapy. 68, 10, p. 2226-2233 8 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Rearrangement of Thiodepsipeptides by S → N Acyl Shift Delivers Homodetic Autoinducing Peptides

Gless, B. H., Bejder, Benjamin Svejdal, Monda, F., Bojer, Martin Saxtorph, Ingmer, Hanne & Olsen, Christian Adam, 2021, In: Journal of the American Chemical Society. 143, 28, p. 10514–10518

Research output: Contribution to journal › Journal article › Research › peer-review

Rates of increase of antibiotic resistance and ambient temperature in Europe: A cross-national analysis of 28 countries between 2000 and 2016

McGough, S. F., MacFadden, D. R., Hattab, M. W., Mølbak, Kåre & Santillana, M., 2020, In: Eurosurveillance. 25, 45, p. 1-12 12 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Rapid in vivo development of resistance to daptomycin in vancomycin-resistant Enterococcus faecium due to genomic alterations

Mollerup, S., Elmeskov, C., Pinholt, M., Sejersen, T. S., Pedersen, M. S., Worning, P., Frees, Dorte & Westh, Henrik T., 2022, In: FEMS Microbiology Letters. 369, 1, 6 p., 063.

Research output: Contribution to journal › Journal article › Research › peer-review

Quorum Sensing-Regulated Phenol-Soluble Modulins Limit Persister Cell Populations in Staphylococcus aureus

Bojer, Martin Saxtorph, Lindemose, Søren, Vestergaard, M. & Ingmer, Hanne, 2018, In: Frontiers in Microbiology. 9, 12 p., 255.

Research output: Contribution to journal › Journal article › Research › peer-review

Quantification of antibiotic resistance genes in wildlife ungulates in Ngorongoro Conservation area and Mikumi National Park, Tanzania

Katakweba, A. A. S. & Olsen, J. E., 2021, In: Tanzania Veterinary Journal. 36, 2, p. 1-10

Research output: Contribution to journal › Journal article › Research › peer-review

Quality of antimicrobial products used in white leg shrimp (Litopenaeus vannamei) aquaculture in Northern Vietnam

Tran, K. C., Tran, M. P., Phan, T. V. & Dalsgaard, Anders, 2018, In: Aquaculture. 482, p. 167-175 9 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Quality of antimicrobial products used in striped catfish (Pangasianodon hypophthalmus) aquaculture in Vietnam

Phu, T. M., Phuong, N. T., Scippo, M. & Dalsgaard, Anders, 21 Apr 2015, In: P L o S One. 10, 4, 8 p., e0124267.

Research output: Contribution to journal › Journal article › Research › peer-review

Punica granatum sarcotesta lectin (PgTeL) impairs growth, structure, viability, aggregation, and biofilm formation ability of Staphylococcus aureus clinical isolates

da Silva, P. M., Baldry, M., Peng, P., de Oliveira Silva, J. N., Soares, T., Brayner, F. A., Alves, L. C., Feitosa, A. P. S., Paiva, P. M. G., Ingmer, Hanne & Napoleão, T. H., 2019, In: International Journal of Biological Macromolecules. 123, p. 600-608 9 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Proton-Pump Inhibitor Use and the Risk of Community-Associated Clostridium difficile Infection

Inghammar, M., Svanström, H., Voldstedlund, M., Melbye, M., Hviid, A., Mølbak, Kåre & Pasternak, B., 2021, In: Clinical infectious diseases : an official publication of the Infectious Diseases Society of America. 72, 12, p. e1084–e1089

Research output: Contribution to journal › Journal article › Research › peer-review

Proteomic analyses of iron-responsive, Clp-dependent changes in Staphylococcus aureus

Farrand, A. J., Friedman, D. B., Reniere, M. L., Ingmer, Hanne, Frees, Dorte & Skaar, E. P., Apr 2015, In: Pathogens and Disease. 73, 3, 6 p., ftv004.

Research output: Contribution to journal › Journal article › Research › peer-review

Producing Tailocins from Phages Using Osmotic Shock and Benzalkonium Chloride

Woudstra, Cedric Folkert Julien & Brøndsted, Lone, 2023, In: PHAGE: Therapy, Applications, and Research. 4, 3, p. 136-140 5 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Probabilistic quantitative microbial risk assessment model of norovirus from wastewater irrigated vegetables in Ghana using genome copies and fecal indicator ratio conversion for estimating exposure dose

Owusu-ansah, E. D. J., Sampson, A., Amponsah, S. K., Abaidoo, R. C., Dalsgaard, Anders & Hald, T., 1 Dec 2017, In: Science of the Total Environment. 601-602, p. 1712-1719

Research output: Contribution to journal › Journal article › Research › peer-review

Probabilistic modeling for an integrated temporary acquired immunity with norovirus epidemiological data

Owusu-Ansah, E. D. G. J., Barnes, B., Abaidoo, R., Tine, H., Dalsgaard, Anders, Permin, A. & Schou, T. W., 2019, In: Infectious Disease Modelling. 4, p. 99-114 16 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Proacaciberin, A cyanogenic glycoside from Acacia sieberiana var. Woodii

Nartey, F., Brimer, L. & Christensen, Søren Brøgger, 1981, In: Phytochemistry. 20, 6, p. 1311-1314 4 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Primary isolation strain determines both phage type and receptors recognised by Campylobacter jejuni bacteriophages

Sørensen, Martine Camilla Holst, Gencay, Y. E., Birk, T., Baldvinsson, S. B., Jäckel, C., Hammerl, J. A., Vegge, C. S., Neve, H. & Brøndsted, Lone, 2015, In: PLOS ONE. 10, 1, 18 p., e0116287.

Research output: Contribution to journal › Journal article › Research › peer-review

Prevalence, antimicrobial resistance and risk factors for thermophilic Campylobacter infections in symptomatic and asymptomatic humans in Tanzania

Komba, E. V. G., Mdegela, R. H., Msoffe, P. L. M., Nielsen, L. N. & Ingmer, Hanne, 6 Mar 2015, In: Zoonoses and Public Health. 62, 7, p. 557-568 12 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Prevalence, Pathogenic Markers and Antibiotic Susceptibility of Vibrio cholerae in Sardines, Water and Phytoplankton in Lake Tanganyika, Tanzania

Sosthenes, N., Mhongole, O. J., Katakweba, A. A. S., Dalsgaard, Anders & Hammerthon Mdegela, R., 2018, In: International Journal of Agriculture, Forestry and Fisheries. 6, 2, p. 29-34

Research output: Contribution to journal › Journal article › Research › peer-review

Prevalence of infective endocarditis in patients with positive blood cultures: a Danish nationwide study

Østergaard, L., Bruun, N. E., Voldstedlund, M., Arpi, M., Andersen, C. Ø., Schønheyder, H. C., Lemming, L., Rosenvinge, F., Valeur, N., Søgaard, P., Andersen, P. S., Skov, R., Chen, M., Iversen, K., Gill, S., Lauridsen, T. K., Dahl, A., Oestergaard, L. B., Povlsen, J. A., Moser, C. & 3 others, Bundgård, Henning, Køber, Lars Valeur & Fosbøl, E. L., 2019, In: European Heart Journal. 40, 39, p. 3237-3244 8 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Prevalence of antibiotic‐resistant Escherichia coli in Danish pigs and cattle

Aalbæk, Bent & Olsen, John Elmerdahl, Jul 1991, In: APMIS. 99, 7-12, p. 1103-1110 8 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Prevalence of antibiotic-resistant bacteria amongst dogs in Africa: A meta-analysis review

Yaovi, A. B., Sessou, P., Tonouhewa, A. B. N., Hounmanou, G. Y. M., Thomson, D., Pelle, R., Farougou, S. & Mitra, A., 2022, In: Onderstepoort Journal of Veterinary Research. 89, 1, a1970.

Research output: Contribution to journal › Review › Research › peer-review

Prevalence and whole genome phylogenetic analysis reveal genetic relatedness between antibiotic resistance Salmonella in hatchlings and older chickens from farms in Nigeria

Jibril, A. H., Okeke, I. N., Dalsgaard, Anders & Olsen, John Elmerdahl, 2023, In: Poultry Science. 102, 3, 102427.

Research output: Contribution to journal › Journal article › Research › peer-review